Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu05g03839 aTGAAGGAGTTATCTCAGGAACTTGCCCTTTTATTGTGGAATTCTTTTGGTACTATTGCCGTACTTTTACAGGAAGTAGTTTCAATATATCCTAATCTTTCACCGGAGTCTCTTACCTCTGCACAAGCAACTCGAGTGTGCAATGTTCTTGCACTACTTCAATGTGTTGCATCTCATCCCGATACAAAGATGCCATTTCTCAAAGCTAACATACCTTTGTATTTGTATCCTTTCCTTGATACAACAAACAAGTTACCACATTTTGAGAATTTGAGACTTTCTTGTCTTGGAGTCATTGGTGCCTTAGTGAAGGTTAGCACCAAAGAAGTTATAAGTTTCTTTCTTGCAAGCGAGATAATTCCTTTGTGCTTGCGCAATATGGAAATCGGCAAAGAGCTGTCAAAAACCGTTGCAACATTTATACTTCAGAAAATTTTGTTAGATGATGATGGTTTGGCTTGTGTTTGTGCTAGACCAGAGCGGTTGTTTGCCGTCGGTCGAATTTTGGACATGGTGTTAGAAAATCTTGAAAATCAACCATCAAATTGTCTTTTGAAGCTTCTAATTCCATGTTATTCTCGTTTGTCTCAAAATCGTTGGGTCGGCAATGCATTAAGAAGCTCTCTTCCGAATGTGTTTGGAAACCCAAATTTCATTAACTCTCTTCGTGGAGATCCAACAACTTGGATGTGGGCACAACAATTGTACGACAATGTTAGGGACAATCGAGTTCATCGTGGAGGAGGAAGCAATGATATTGTGGGATCGTCAACATCTGCATCCGAATAA 789 0.3942 MKELSQELALLLWNSFGTIAVLLQEVVSIYPNLSPESLTSAQATRVCNVLALLQCVASHPDTKMPFLKANIPLYLYPFLDTTNKLPHFENLRLSCLGVIGALVKVSTKEVISFFLASEIIPLCLRNMEIGKELSKTVATFILQKILLDDDGLACVCARPERLFAVGRILDMVLENLENQPSNCLLKLLIPCYSRLSQNRWVGNALRSSLPNVFGNPNFINSLRGDPTTWMWAQQLYDNVRDNRVHRGGGSNDIVGSSTSASE 262
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu05g03839 262 Pfam Cell differentiation family, Rcd1-like 3 239 - -
Tsu05g03839 262 SUPERFAMILY ARM repeat 41 147 IPR016024 -
Tsu05g03839 262 Gene3D - 1 244 IPR011989 -
Tsu05g03839 262 PANTHER UNCHARACTERIZED 2 241 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tsu05g03839 Tsu-Chr5 49485451 49487898 Dispersed/Proximal
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR Rcd1-like Tsu05g03839 Rcd1 7.2e-94 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu05g03839 K12606 - oeu:111395739 303.138