Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu05g03810 ATGGCAGACATTGCTCTCTCCATTGCAGCCAAGCTTTCAGAATATTTGGTCAAGCCATTACTACACCATGCTCATTACATGTTCGGTTTCAACAAAATCGTTAGAAATCTTTATGATATTAAAGGCAAGTTGATATTAACACAAAATAGTGTGAATGAACGCATGAAAGAAGCTAGAAGGAAAACCGAAATAATTGAGGAAGCTGTAGAGATGTGGATGAATGACGTGAATAATGTCTTAAAAGATGTAGAGAAGCTTGAAGAAAAAACCAAAGAAAACAAAGGGTGTTACCGTGTACCGTTACAATACTTTCTAgcaaaagaagtagaaaatgtgACACagaaaatgatgaatctaaATAGCTGCAAAATTGAGCCGTTTTCTAGGCGCACCGAACTTCCTGGCATGAAATACTTCTCATCGAAAAACTTTGTGTATTCCAAGTCCACTGAGAATGCTTATAATAAACTCATGGAGGCATTGGAAGATGGAAAATGTCACATGATTGGATTTCATGGGATGGGAGGATCTGGTAAAACCACTTTGGTGAAAGAGGTTGGCAAGAAAGCTGAGGAGTTGCAACTTTTCGACAAAGTTGTTATGGCTGTTGTCTCTCACAATCCAGAAGTGACATATATCCAAGGTCAAATTGCAGACAGTTTGGGTTTGAAATTGAGGGAAGAGACACCAATTGGTAGAGCACAAAGACTTTCAACAAGTTTACAAAATGAGAGGACTCTTGTGATCTTGGATGATGTGTGGGAGAATCTTGATTTTGAAGCCATAGGGATTCCACCCCGTTGCACTGTCTTGTTAACTACTCGCGGTCGAGATGTTTGCGTGTCTATGAGCTGTCAAGTTACAGTTGGGTTGTCTCTCTTGGATGACGAGGAAGCTTGGACTTTGTTTAAAAGGTGCGCAGATATCATTGACGACTCACCATATGCCTTGAAGTTGAAGAATGTGCCAAGGAAAATTTCTCAAGAGTGCAAAGGACTCCCAATTGCAATTGTGACTATGGCGAGTATGTTAAGAGGAAAGCAAATTGAAGAGTGGGAGTTTGCATTGCTTAGACTAGAAAAATCACAGGCCATAGGTGTCGCAGAAGTGCTGAGTAGTTGTTATGCATGCATCAAGTTAAGCTATGACAATTTGCCAAATCAAGTATCTAAAAATCTCTTTTTATTGTGCTCCATGTTTCCTGATGAGATCAATGTGGAAGATTTGGTTAGGTATATGAAGGGACTTGGACCAGCTGCTGGAACTATTGGCAGAATGGAGAAAGTAAGGACAGAGATACAAGTGACCATGAACATCCTCAAAGATTCATATTTGTTGCAACCTTGTGGTAAAAATGAATATGTGAAAATGCATGACTTGGTTCGCGATGCAGCCTTATGGATTGCTTCCAAAGAAGGTAAAGCAATTAAGGTACCTACAAAAACATTGGCAGCAGTAGAAGAAAATGTAAAAGAGTTGGCTGCAATATCTTTACGGGGACTGGAGAATCTTCCTCCTGTTGATCAATTGCAGTGTCCGAATCTCAAGACTCTTCTAATTCATTCCACAGAAGAATCTTCTTTACAATTACCAATTGCATATTTTGGAAAGATGCAAATGTTGGAAGTCTTGGGGATTACAAGATTTTACTACACATGGCTCAATCTGTATACGCTGCGCTACTTGAGTTCATCATTGTCTATCTTAGCCATGCCACAATCAATAGAGAAACTAACTTTGCTAGGAACTCTATGTCTAAGAGGATATGAATTAGGCGATATCTCTATACTGGCAAGCTTAACAAGACTTGAGATTCTCGATTTGCGCAGTTCAACTTTCGATGAACTTCCACAAGGAATCACAGCTTTGCAGAAACTAAGACTACTGGATATATACACTTGTCGCATCAAGAAGAACAACCCTTATGAAGTGATAAGTAAATGTACACAGCTAGAGGAACTGTATATATGGAGAGTTGAAGATGATTCTTTTCATATTATCTCTTTACCGATGTTGCATAGATATGTAATTGTCTGTGACAAGTTTAGGGAAAACTGTAGATTCCTCATAGATGCTTATCTAGAGGACCACGTGCCGTCAAGAGCATTATGCATAGACCAGTTTGATGCCTCTTCTCTTATTCATGGTTCATCTTCAATCAAAGATTTGTTTCTGAGATCGGAGCACCTTTACTTGGGGCATCTTCGGGGAGGATGCAAAAACATTGTCCCGCACATGGATCAAGGAGGCATGACTGAGCTGATTGGGCTAATACTCGAGTCTTGTTCAGATATAGAGTGCCTCCTTGATACTACAGATACCAATTTGCCAGCATTCTTTGAGTTGGTTACCTTGAAGTTGATATGGATGAATGGTCTTAAACAAGTTTTCTATGATCTAACTTCCCAGTGCACTCTTGAAAAATTACAAGATCTGCAGATAGAGTATTGTACACAACTGAGTAGCATATCTTTTCCAAGGAAATCAAATATGCGTAATCTTAAGATTCTCAGATTACAATGGTGTCCAATGCTAACATCATCACTTTTCACACCTGCCATTGCTCGAAGCTTAGTGCTACTAGAggaattaaaattatttgattgcAGTAATTTGAAGCAAATCATAGCAGAAGAGTACTCGGAAACTGAGAATGCTAGTAATCCAAATCCTACCTTAAAAGTGTTCCCAAATCTAAGGGTTCTTCATGTGCATGGATGTCAAAGTTTAGAATCAATCTTTCCGGTCACTTTCGCTCAAAGTCTAGAGAGATTAGAGAAGATAGTTATATGGTACAACTTTGGTTTAAAGTATGTATTTGGTATACACAATGATTACAAGTATAGCGGGAATGAGGCTAAGGCCAACATCAATCTCATTGCTTTGAGAAGAATCTCACTTGTATCATTGTcgaatttgattgacattttccCTACATATTGTCATCCAAGGTCACCAAATTTGAAAGAGATAGAATGCAGAGAATGTCCTCGCTTGTCAACCAATGTAATATACAAGACTCTGATCAGTTCACATCAGCAGAAAGGTCTCATGGCCACAGAGGAGAGAGTGGTATTTCCTGATAGTGGAGAATCTGTCCTAGACTTGGAATGTCTTACCATTGAGAATTCTATGGTAGAAGGCATTTTCCAACTGCAAGAAGTAAAACAATGGCCCTTGAACTCAAACATATCTCATTTATGTTTAAAGGACTTACCTGAGTTGAGGCTTATTTGGAAGGGCCCAAAAGATGTCCTCAGCCTCCATAAACTCAAGAGTTTGGTGCTGGTTGGATGTACAAACTTGGAAACCATCTTCTCTCCCACTATTGTTGGAAGCCTAGCAGAGCTGAGTGAACTTGTTGTAAGCAAGTGTGAAAAGTTGCAGCACATCATCTCTTTAGATCATTCGGAACAAGATGGAAACTTATCTTTTTATTCCAAATCAGCGTGCTTCTCTCTACTGTCCATAGTTCATGTCTTTCAGTGCAACAGTTTGAAATGTCTTTTCTTATCTCATTCATTGGCTTCTCCATTTCCTGAATTAGAGTTTATTACTGTAGAGGAGTGTGCTGAAATAGAACAGGTTTTCTATTTCAATGATGACGATAAAGCTCAACATGTGtctgaagaaaacaaacaacattTAGTCCTTCCGAAGTTACGTGAGGTTAAACTCGTATGTTTGCCAAACATCACTGAGTTTTGTCAAGGACCTTATAAACTGCAGCAAAATGTGAAACATTACACAGTGAGGCACTGTCCCAAATATACTTGTGCTTGGTTGCAAACTAAAAATCAGCTACATAACATTTCATGGAAGGGATTAGGATCAGGCTCAACTAGTACTTTTTCTGCTGCTATTGGTAGCAGTGTTAATGATCCTGAGATACAAGAGAGGGTGAGCAAGTTGGAGAAAAACGTAGAATCCGAGAGACAAAAAAGAAGGTTGATGGAGTTAGATTTACAGGTTGAGAAGGCAAAGCGAAGACTAATAGAACTGAAACTGGAAGCTGAGCAGGAAAGACGACAGATCATGGAAGAAACAttgctttctttctttcataAAATGCTTGGAAGGGTCCCTCAACAGTTCTCAAACCTTCTTTCTCAAACTCAATTGgcaaaaaatgaagaaagtgaagatcaGGATTTTTTCGATGTATCCATACAGTCCCTTTGA 4182 0.3795 MADIALSIAAKLSEYLVKPLLHHAHYMFGFNKIVRNLYDIKGKLILTQNSVNERMKEARRKTEIIEEAVEMWMNDVNNVLKDVEKLEEKTKENKGCYRVPLQYFLAKEVENVTQKMMNLNSCKIEPFSRRTELPGMKYFSSKNFVYSKSTENAYNKLMEALEDGKCHMIGFHGMGGSGKTTLVKEVGKKAEELQLFDKVVMAVVSHNPEVTYIQGQIADSLGLKLREETPIGRAQRLSTSLQNERTLVILDDVWENLDFEAIGIPPRCTVLLTTRGRDVCVSMSCQVTVGLSLLDDEEAWTLFKRCADIIDDSPYALKLKNVPRKISQECKGLPIAIVTMASMLRGKQIEEWEFALLRLEKSQAIGVAEVLSSCYACIKLSYDNLPNQVSKNLFLLCSMFPDEINVEDLVRYMKGLGPAAGTIGRMEKVRTEIQVTMNILKDSYLLQPCGKNEYVKMHDLVRDAALWIASKEGKAIKVPTKTLAAVEENVKELAAISLRGLENLPPVDQLQCPNLKTLLIHSTEESSLQLPIAYFGKMQMLEVLGITRFYYTWLNLYTLRYLSSSLSILAMPQSIEKLTLLGTLCLRGYELGDISILASLTRLEILDLRSSTFDELPQGITALQKLRLLDIYTCRIKKNNPYEVISKCTQLEELYIWRVEDDSFHIISLPMLHRYVIVCDKFRENCRFLIDAYLEDHVPSRALCIDQFDASSLIHGSSSIKDLFLRSEHLYLGHLRGGCKNIVPHMDQGGMTELIGLILESCSDIECLLDTTDTNLPAFFELVTLKLIWMNGLKQVFYDLTSQCTLEKLQDLQIEYCTQLSSISFPRKSNMRNLKILRLQWCPMLTSSLFTPAIARSLVLLEELKLFDCSNLKQIIAEEYSETENASNPNPTLKVFPNLRVLHVHGCQSLESIFPVTFAQSLERLEKIVIWYNFGLKYVFGIHNDYKYSGNEAKANINLIALRRISLVSLSNLIDIFPTYCHPRSPNLKEIECRECPRLSTNVIYKTLISSHQQKGLMATEERVVFPDSGESVLDLECLTIENSMVEGIFQLQEVKQWPLNSNISHLCLKDLPELRLIWKGPKDVLSLHKLKSLVLVGCTNLETIFSPTIVGSLAELSELVVSKCEKLQHIISLDHSEQDGNLSFYSKSACFSLLSIVHVFQCNSLKCLFLSHSLASPFPELEFITVEECAEIEQVFYFNDDDKAQHVSEENKQHLVLPKLREVKLVCLPNITEFCQGPYKLQQNVKHYTVRHCPKYTCAWLQTKNQLHNISWKGLGSGSTSTFSAAIGSSVNDPEIQERVSKLEKNVESERQKRRLMELDLQVEKAKRRLIELKLEAEQERRQIMEETLLSFFHKMLGRVPQQFSNLLSQTQLAKNEESEDQDFFDVSIQSL 1393
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu05g03810 1393 Gene3D - 382 466 IPR036388 -
Tsu05g03810 1393 Gene3D - 293 381 IPR042197 -
Tsu05g03810 1393 Gene3D - 139 289 IPR027417 -
Tsu05g03810 1393 Pfam NB-ARC domain 150 384 IPR002182 GO:0043531
Tsu05g03810 1393 SUPERFAMILY RNI-like 1034 1194 - -
Tsu05g03810 1393 Coils Coil 1301 1349 - -
Tsu05g03810 1393 Gene3D Ribonuclease Inhibitor 773 949 IPR032675 -
Tsu05g03810 1393 PANTHER - 4 1001 - -
Tsu05g03810 1393 PANTHER - 1030 1256 - -
Tsu05g03810 1393 PRINTS Disease resistance protein signature 168 183 - -
Tsu05g03810 1393 PRINTS Disease resistance protein signature 829 845 - -
Tsu05g03810 1393 PRINTS Disease resistance protein signature 240 254 - -
Tsu05g03810 1393 PRINTS Disease resistance protein signature 330 344 - -
Tsu05g03810 1393 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 151 397 IPR027417 -
Tsu05g03810 1393 SUPERFAMILY L domain-like 456 979 - -
Tsu05g03810 1393 Coils Coil 69 93 - -
Tsu05g03810 1393 PANTHER NBS-LRR TYPE DISEASE RESISTANCE PROTEIN 4 1001 - -
Tsu05g03810 1393 PANTHER NBS-LRR TYPE DISEASE RESISTANCE PROTEIN 1030 1256 - -
Tsu05g03810 1393 Gene3D Ribonuclease Inhibitor 477 674 IPR032675 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tsu05g03810 Tsu-Chr5 49278455 49283091 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tsu05g03810 154 477 WRKY Transcription Factor Family AT5G45050 27.221 5.04e-12 68.9
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu05g03810 - - mtr:MTR_5g092190 2325.82