Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu05g03803 ATGAGCTTCTTTTCATGTTGTAAGTTACAAGAGAAAACCACCAAGAGCTCATCATTGAAGAAAAACCTTAAGGATTATCATAATGTTTGTTTCAAACCTGATAATGGCAAAAGGAAGTACATAGTAgaggaagaaaatgaaatagATGGAAAAGGAAATATTACCTCTAAGATATTTTCTTACCATGAGCTATGTGTTGCAACTAAGAATTTTCATGTCCAAAATATGGTTGGTGAAGGAGGCTTTGGGAGAGTGTACAAAGGGCGCATTAAAAGCATGGATAATAAGGTTGTTGCTGTAAAGAAACTTAACAAACATGGGTTTCAAGGAAGTAGAGAATTTCTTGCAGAGgttatgattttgagttttttgcACAACAATTACCTTGTCAACTTAGTAGGGTATTGTAGTGAAGGTGACCAAAGGATTTTGGTATATGAGTACATGGCAAATGGTTCTTTAGAAGATCACCTCTTTGAGTTACCTCCGGGAAAAAAGCCTTTGGATTGGTACACTAGAATGAAAATTGCAGAAGGTGCAGCGAGAGGACTTGAATATTTACACGAAGAAGCAAGTCCGCCGGTGATATACCGTGATTTCAAAGCATCAAACATACTATTAGACGAAAACTTCAATCCAAAACTATCAGATTTCGGACTTGCAAAGCTTGGTCCGACCGGAGATAAAACACACGTGTCCACTAGAGTGATGGGAACTTATGGCTATTGTGCACCTGAGTATGCCTCAACAGGTCAATTGACTTCAAAATCAGATGTTTACAGTTTTGGAGTAGTGTTTTTAGAGATGATTACGGGTAGAAGAGTACTTGATTATTCAAGATCATCTGAAGAGGAAAACTTGATCAATTGGgcattaccactactcaaaaacaaaagaaaatatacatTATTGGCTGATCCATTGCTAAAAGGGAACTACCCAATGAGGGGTCTATACCAAGCACTAGCAATTGCATCAATGTGTTTATTGGATGATGCTACTGCTAGACCTTTAATTAGTGATGTAGTCACAGCTCTTGGAGTTTTAGCAAtgcatttttttgaaaaaggagAATGCAGttga 1083 0.3453 MSFFSCCKLQEKTTKSSSLKKNLKDYHNVCFKPDNGKRKYIVEEENEIDGKGNITSKIFSYHELCVATKNFHVQNMVGEGGFGRVYKGRIKSMDNKVVAVKKLNKHGFQGSREFLAEVMILSFLHNNYLVNLVGYCSEGDQRILVYEYMANGSLEDHLFELPPGKKPLDWYTRMKIAEGAARGLEYLHEEASPPVIYRDFKASNILLDENFNPKLSDFGLAKLGPTGDKTHVSTRVMGTYGYCAPEYASTGQLTSKSDVYSFGVVFLEMITGRRVLDYSRSSEEENLINWALPLLKNKRKYTLLADPLLKGNYPMRGLYQALAIASMCLLDDATARPLISDVVTALGVLAMHFFEKGECS 360
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu05g03803 360 ProSitePatterns Serine/Threonine protein kinases active-site signature. 195 207 IPR008271 GO:0004672|GO:0006468
Tsu05g03803 360 SUPERFAMILY Protein kinase-like (PK-like) 54 346 IPR011009 -
Tsu05g03803 360 ProSiteProfiles Protein kinase domain profile. 71 354 IPR000719 GO:0004672|GO:0005524|GO:0006468
Tsu05g03803 360 CDD STKc_IRAK 77 346 - -
Tsu05g03803 360 PANTHER OS07G0668900 PROTEIN 1 356 - -
Tsu05g03803 360 Gene3D Transferase(Phosphotransferase) domain 1 149 355 - -
Tsu05g03803 360 Gene3D Phosphorylase Kinase; domain 1 41 148 - -
Tsu05g03803 360 PANTHER RECEPTOR SERINE/THREONINE KINASE 1 356 - -
Tsu05g03803 360 Pfam Protein kinase domain 71 287 IPR000719 GO:0004672|GO:0005524|GO:0006468
Tsu05g03803 360 ProSitePatterns Protein kinases ATP-binding region signature. 77 102 IPR017441 GO:0005524
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tsu05g03803 Tsu-Chr5 49236912 49239670 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tsu05g03803 1 350 Glycoside Hydrolase AT3G07070 56.983 5.37e-147 420
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_RLCK-VIIa-1 Tsu05g03803 Pkinase 5.2e-46 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu05g03803 - - gmx:100798032 545.043
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tsu05g03803 05 49236912 49239670 Tsu05g03803 05 49236912 49239670 ECH
Tsu03g01348 03 12901869 12904272 Tsu05g03803 05 49236912 49239670 PCT