Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Tsu05g03800 | ATGCACTCACAAGTGGAAAAATTAGAAGACCTTATGATGTTGGACTCCGATGATGATGTTCGAGTTGTAGGGATTTCTGGAATGGGCGGAATAGGGAAGACAACTCTTGCTAATGTTTTGTATGCTAGAATCTCTAATCAATTTGAAGCTTGCTGCTATATTGAAGATGTAAGTAAAACTTATGGAGGTTATGGCCCAACTGAAGTGCAAAAGCAACTTCTTTGTCAAACTCTCAAAGAAGAAAATCTTCAGATATACAATGGTTATATGGCATCTAATTTGATTCGAACTAGGCTGTGTCAAATAAAATCCCTTGTAATCCTTGATAATGTTGATAAAGTTGAACAATTGGATAAATTAGCCATGAGACGAGAGTGTCTAGGTACTGGGAGCAGAATGATCGTAATTTCTAGAGATAATCATATCTTGAGAGAGCATGTAGATGAAGTTTACGAAGTTCAACTCTTGGATGATAGTAATGCCCTTCAATTGTTTTGTAGGAAAGCTTTCAAAAGTGATGATATCTTGACCAGTTACACAGACTTGACAAATGATGTACTACAATATGCCAATGGCCATCCATTAGCAATTAAAGTATTGGGATCATTTTTGTATGGTCGAGATGTCTCTGAATGGAGAAGTGCATTGGAAAGATTAAGAGAGAATCCAATGGCAGGTATTATGGATGTACTCCGAATTAGTTTTGATGGGCTATTGGATACAGAAAAGGGTATATTTCTTGATATTGCTTGTTTCTTTTACATAGAACGTGAGACATACGTGAAGGAAGTTTTAGATTTTCGTGGATTTCATCCTGAAATTGGTTTAAGTGTTCTCGTTGATAGGTCATTCATTACTTGTGAGTGTGGGGGAATTTATATGCATGATTTATTCAGAGAACTAGGCAAGAGTATCGTTAGAGAAAAATCACCCAAAGAACCAAGAAAGTGGAATAGATTGTGGGACTACAAGGATGTCCACAAAGTTATGTCAGAAAACATGGAAACAGAAAACCTTGAAGCCATAGTTCTGAAGTCTTATTGTGATAACATTGATGAAATAAAAGCAATGTCAACATTGAGGGCAGAAAGTTTAGCACAAATGAATCGCCTTAAATTGCTCGAGCTGTGGAATTTGAATTTCTCAGGAAGTCTCAATTTTCTTTCAAGTGAATTGGGGTATCTATGTTGGGATAAATATCCTTTCACTTGTTTGCCATCGAGTTTTGAGCCGGATAAACTTGTTGAACTGATCCTACCTCATAGCAACATCAGGCAACTATGGGAGGGCAAAAAGCCTCTTCATAATTTGACACGTCTTGATCTCTCTCACTCGGAAAATCTTACTATGATGCCAAGTTTTTTGGAGATTCCAAATCTTGAGTTCCTAAATCTTGAAGGATGCATAAAACTTGTGCAGATTGATCCATCCATTGGTATCTTAAGAAGGCTTTCcgaattaaatttgaaaaattgtacAAATCTTGTTAGTATTCCTAACAGAATTTTTGGTCTGAGTTCtcttaaatctctaaatctcTCAGGCTGCCCAAATTTTTTGTTAGAGGGACAAAGAAAAATAGAACATTTGGAGATGCTTGAAAACAACGAGATTACCACCCAATACCAACCAACATCCTCCATCTACAAAGTTTTAAAGTCATCCTTccgatttttaatttttcaaaaaagtaGAGATCCTCCAATTGGTTTATTGTTGCCTTTGGTGTCTCGTTTGTCATGTTTACAACATCTAGACCTAAGTTTCTGCAATCTTCCTCAAATCCCTACTGCCATTGGGTGGTTACACTGCTTAGATACACTAAATTTGTCCGGTAACAATTTTGTTACATTACCTAGCTTCAAAGAACTTTTTAAACTTATAGATTTGAATTTGGAGCACTGTAAGCAGCTGAAATATTTACCTGAACTCCCATCAGAAACTGTTTTGTCAGTAAGAAGCACTTGTTGtgtattaaatatttttggttGCCCCAGTTTAACTGACATAGAATGTTGTTATAGAATGGTTTTATCTTGGTTTATACAACTCCTTCTTCAGGTGCTTACTCCATCCTTTTTCCTTTTGTATATGgttcttttattatttgattga | 2115 | 0.3485 | MHSQVEKLEDLMMLDSDDDVRVVGISGMGGIGKTTLANVLYARISNQFEACCYIEDVSKTYGGYGPTEVQKQLLCQTLKEENLQIYNGYMASNLIRTRLCQIKSLVILDNVDKVEQLDKLAMRRECLGTGSRMIVISRDNHILREHVDEVYEVQLLDDSNALQLFCRKAFKSDDILTSYTDLTNDVLQYANGHPLAIKVLGSFLYGRDVSEWRSALERLRENPMAGIMDVLRISFDGLLDTEKGIFLDIACFFYIERETYVKEVLDFRGFHPEIGLSVLVDRSFITCECGGIYMHDLFRELGKSIVREKSPKEPRKWNRLWDYKDVHKVMSENMETENLEAIVLKSYCDNIDEIKAMSTLRAESLAQMNRLKLLELWNLNFSGSLNFLSSELGYLCWDKYPFTCLPSSFEPDKLVELILPHSNIRQLWEGKKPLHNLTRLDLSHSENLTMMPSFLEIPNLEFLNLEGCIKLVQIDPSIGILRRLSELNLKNCTNLVSIPNRIFGLSSLKSLNLSGCPNFLLEGQRKIEHLEMLENNEITTQYQPTSSIYKVLKSSFRFLIFQKSRDPPIGLLLPLVSRLSCLQHLDLSFCNLPQIPTAIGWLHCLDTLNLSGNNFVTLPSFKELFKLIDLNLEHCKQLKYLPELPSETVLSVRSTCCVLNIFGCPSLTDIECCYRMVLSWFIQLLLQVLTPSFFLLYMVLLLFD | 704 |
Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Tsu05g03800 | 704 | SUPERFAMILY | P-loop containing nucleoside triphosphate hydrolases | 3 | 249 | IPR027417 | - | |
Tsu05g03800 | 704 | Gene3D | - | 1 | 153 | IPR027417 | - | |
Tsu05g03800 | 704 | SMART | LRR_typ_2 | 481 | 505 | IPR003591 | - | |
Tsu05g03800 | 704 | SMART | LRR_typ_2 | 602 | 627 | IPR003591 | - | |
Tsu05g03800 | 704 | SMART | LRR_typ_2 | 579 | 600 | IPR003591 | - | |
Tsu05g03800 | 704 | PRINTS | Disease resistance protein signature | 22 | 37 | - | - | |
Tsu05g03800 | 704 | PRINTS | Disease resistance protein signature | 98 | 112 | - | - | |
Tsu05g03800 | 704 | PRINTS | Disease resistance protein signature | 432 | 448 | - | - | |
Tsu05g03800 | 704 | PRINTS | Disease resistance protein signature | 190 | 204 | - | - | |
Tsu05g03800 | 704 | Gene3D | Ribonuclease Inhibitor | 569 | 687 | IPR032675 | - | |
Tsu05g03800 | 704 | Pfam | Leucine Rich Repeat | 413 | 432 | IPR011713 | - | |
Tsu05g03800 | 704 | Gene3D | - | 155 | 239 | IPR042197 | - | |
Tsu05g03800 | 704 | Gene3D | Ribonuclease Inhibitor | 334 | 545 | IPR032675 | - | |
Tsu05g03800 | 704 | ProSiteProfiles | Leucine-rich repeat profile. | 604 | 625 | IPR001611 | GO:0005515 | |
Tsu05g03800 | 704 | PANTHER | LEUCINE-RICH REPEAT-CONTAINING PROTEIN | 1 | 659 | IPR044974 | GO:0006952 | |
Tsu05g03800 | 704 | PANTHER | REPEAT-CONTAINING PROTEIN, PUTATIVE-RELATED | 1 | 659 | - | - | |
Tsu05g03800 | 704 | SUPERFAMILY | L domain-like | 294 | 683 | - | - | |
Tsu05g03800 | 704 | Pfam | NB-ARC domain | 4 | 224 | IPR002182 | GO:0043531 |
Select | Gene | Chromosome | Start | End | Duplicated_type |
---|---|---|---|---|---|
Tsu05g03800 | Tsu-Chr5 | 49207770 | 49211918 | Dispersed/Proximal |
Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
---|---|---|---|---|---|---|---|---|
Tsu05g03800 | 19 | 675 | WRKY Transcription Factor Family | AT5G45050 | 30.725 | 4.45e-77 | 267 |
Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Tsu05g03800 | - | - | mtr:MTR_4g080777 | 1017.3 |