Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Tsu05g03798 | ATGGCTTGTAGTAGCAACCAAATTGTCTCTTCATCTAGAATGACATGGAAATATGATGTGTTTGTGAGCTTCAGAGGTGAAGACACACGCAACAATTTCACTGATCACCTTTTTGGTGCTTTTCATAGAAAAGGCATTGTTGCCTTCAAGGATGATACAAAGCTCAAGAAAGGGGAAGATATATCATCTGAGCTTCTAAAAGCCATTGAAGGATCTCAAATTTTGATTGTTATCTTCTCAAGAAACTATGCTTCTTCCAAATGGTGCTTGCGGGAACTAGCAAAAATTGCTGAATGCGAAGTATTAGGACAAACTGTGCTACCTATTTTCTATGATGTGAGTCCATCTGAGGTACGAAAGCAAAGTGGAGATTTTGAAAAAGCGTTTAGGGAGCATGGattcaaagaaaaattagaGGAAGTGCAAAGATGGAGGGGAGCTCTAACACAAGTAGCCAACCTCTCTGGTTATGATTTAAAGGATAAGGGACAATATGCAGAGATTGAAAGAATTGTTAAAGATGTAACAAGCTTATTGGGTCACAAATTTTCAACAATACCTGATGATATAGTTGGGATGCACTCACAAGTGGAAAAATTAGAAGACCTTATGATGTTGGACTCCGATGATGATGTTCGAGTTGTAGGGATTTCTGGAATGGGCGGAATAGGGAAGACAACTCTTGCTAATGTTTTGTATGCTAGAATCTCTAATCAATTTGAAGCTTGCTGCTATATTGAAGATGTAAGTAAAACTTATGGAGGTTATGGCCCAACTGAAGTGCAAAAGCAACTTCTTTGTCAAACTCTCAAAGAAGAAAATCTTCAGATATACAATGGTTATATGGCATCTAATTTGATTCGAACTAGGCTATGTCAACTAAAATCCCTTGTAATCCTTGATAATGTTGATCAAGCTGAACAACTGGATAAATTAGCCATGAAACGAGAGTGGCTAGGTACTGGGAGCAGAATGATCGTAATTTCTAGAGATTGTCATATCTTGAGAGAGCATGTAGATGAAGTTTACGAAGTTCAACGCTTGGATCACAGTAATGCCCTTCAATTGTTTTGTAGGAAAGCTTTCAAAAGTGATGATATCTTGACCGGTTACACAGACTTGACAAATGATGTACTAAAATATGCCAATGGCCATCCATTAGCAATTAAAGTATTGGGATCATTTTTGTATGGTCGAGATGTCTCTGAATGGAGAAGTGCATTGGAAAGATTAAGAGAGAATCCAATGGCAGGTATTATGGATGTACTCCGAATTAGTTTTGATGGGCTATTGGATACAGAAAAGGGTATATTTCTTGATATTGCTTGTTTCTTTGTAAGAGAAAGGGAGATATATGTGAAGAAAGTTTTAGAATTTCGTGGATTTCATCCTGAAATTGGTTTAAGAGTTCTCCATGATAAGTCATTCATTACTTTTAATCGATGGGGGCGTTTGTGTATGCATAATTTATTCAAAGAACTCGGCAAGAGTATCGTTAGAGAAAAATCGCCCAAAGAACCAAGAAAGTGGAATAGATTGTGGGACTACAAGGATGTCCACAAAGTTATGTCAGAAAACATgGAAACAAAAAACCTTGAAGCGATAGTACTGAAGCGTTCTGCAAacattgaaaaaatacaaacaatgtCAACTTTGAGGGCAGAAAGTTTATCACAAATGAAAAGCCTTAAATTGCTCAAGCTGTGGCATTTGAATTTCTCAGGAAGTCTCAATTTTCTTTCAAGTGAATTGGGGTATCTATGTTGGGATAAATATCCTTTCACAAGTTTGCCATCGAGTTTTGAGCCGGATAAACTTGTTGAACTGATACTACCTCATAGCAACATCAGGCAACTATGGGAGGGCACAAAGTCTCTTCATTATTTGACACATCTTGATCTCTCTCACTCGAGAAATCTTATTATGATGCCAAGTTTTTTGGAGATTCCAAATCTTGAGTTCCTAGATCTTCAAGGATGCATAAAACTTGCGCAGATTGATCCATCCATTATTACCTTAAGAAGACTATCCAcgttaaatttgaaaaattgtacAAATCTTGTTAGTATTCCTAACAAAATTTTTGGTCTGACTTCTCTTCAATCCCTAGATCTCTCAGGCTGCCCAAATTTTTGGTTCGGGGGACAAAGAAAAATAGAACATTTGGAGATGCTTGAAAACAAAGAAACTACTACCGAATACCAACCAACATCCTTCATCTACAAAGTTTTAAAGTCACCCTtcagattttttaattttcaaaaaagtaGAAATCCAATTGGTTTATTGTTGCCTTTGGTGTCTCCTTTGTCATGTTTACAACATCTACGCCTAAGTTTCTGCAATCTTCCTCAAATCCCTGCAGCTATTGGGTGGTTACACTGCTTAGAAACACTAAATTTGAGGGGTAACAATTTTGTTACATTACCTAGCTTCAAagaactttttaaacttaaagATTTGAACTTGGAGCACTGTAAGCAGCTGAAATATTTACCTGAACTCCCATCAAAAACTGTCTTTCCAGTAAGAAGCACCtattatgtattaaatatgTTTGGTTGCCCCAGTTTAACCGACATAGAATGTTGTTATGGAATGGTTTTATCTTGGATGATACAACTCCTTCAGGTGCACATGCAATCCGATCTCCCAACTGGTGGGATTGAGATTGTGATTCCTAGAATGGAAATTCCAATGTGGTTCAATAAACAAAATGCGGGCAGTTCAATAAGCATGGAACCATTACCCAATATGGATGACAAGAATTTGATAGGTGTTGCTGTTGCTTCCTGCATAACACTTGTAGCACATGATTATCCAACTGAAATGTCACCTGGTATTAGTTTCGGTTTTAAAGgaaaaaatttattcactCGATGGATTTTATAA | 2892 | 0.3589 | MACSSNQIVSSSRMTWKYDVFVSFRGEDTRNNFTDHLFGAFHRKGIVAFKDDTKLKKGEDISSELLKAIEGSQILIVIFSRNYASSKWCLRELAKIAECEVLGQTVLPIFYDVSPSEVRKQSGDFEKAFREHGFKEKLEEVQRWRGALTQVANLSGYDLKDKGQYAEIERIVKDVTSLLGHKFSTIPDDIVGMHSQVEKLEDLMMLDSDDDVRVVGISGMGGIGKTTLANVLYARISNQFEACCYIEDVSKTYGGYGPTEVQKQLLCQTLKEENLQIYNGYMASNLIRTRLCQLKSLVILDNVDQAEQLDKLAMKREWLGTGSRMIVISRDCHILREHVDEVYEVQRLDHSNALQLFCRKAFKSDDILTGYTDLTNDVLKYANGHPLAIKVLGSFLYGRDVSEWRSALERLRENPMAGIMDVLRISFDGLLDTEKGIFLDIACFFVREREIYVKKVLEFRGFHPEIGLRVLHDKSFITFNRWGRLCMHNLFKELGKSIVREKSPKEPRKWNRLWDYKDVHKVMSENMETKNLEAIVLKRSANIEKIQTMSTLRAESLSQMKSLKLLKLWHLNFSGSLNFLSSELGYLCWDKYPFTSLPSSFEPDKLVELILPHSNIRQLWEGTKSLHYLTHLDLSHSRNLIMMPSFLEIPNLEFLDLQGCIKLAQIDPSIITLRRLSTLNLKNCTNLVSIPNKIFGLTSLQSLDLSGCPNFWFGGQRKIEHLEMLENKETTTEYQPTSFIYKVLKSPFRFFNFQKSRNPIGLLLPLVSPLSCLQHLRLSFCNLPQIPAAIGWLHCLETLNLRGNNFVTLPSFKELFKLKDLNLEHCKQLKYLPELPSKTVFPVRSTYYVLNMFGCPSLTDIECCYGMVLSWMIQLLQVHMQSDLPTGGIEIVIPRMEIPMWFNKQNAGSSISMEPLPNMDDKNLIGVAVASCITLVAHDYPTEMSPGISFGFKGKNLFTRWIL | 963 |
Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Tsu05g03798 | 963 | Gene3D | - | 180 | 346 | IPR027417 | - | |
Tsu05g03798 | 963 | SUPERFAMILY | L domain-like | 552 | 864 | - | - | |
Tsu05g03798 | 963 | Pfam | Leucine Rich Repeat | 605 | 624 | IPR011713 | - | |
Tsu05g03798 | 963 | PANTHER | LEUCINE-RICH REPEAT-CONTAINING PROTEIN | 12 | 849 | IPR044974 | GO:0006952 | |
Tsu05g03798 | 963 | SUPERFAMILY | Toll/Interleukin receptor TIR domain | 10 | 157 | IPR035897 | - | |
Tsu05g03798 | 963 | PANTHER | RESISTANCE PROTEIN (TIR-NBS-LRR CLASS), PUTATIVE-RELATED | 12 | 849 | - | - | |
Tsu05g03798 | 963 | ProSiteProfiles | Leucine-rich repeat profile. | 795 | 816 | IPR001611 | GO:0005515 | |
Tsu05g03798 | 963 | Gene3D | Ribonuclease Inhibitor | 515 | 735 | IPR032675 | - | |
Tsu05g03798 | 963 | Pfam | TIR domain | 17 | 176 | IPR000157 | GO:0007165 | |
Tsu05g03798 | 963 | PRINTS | Disease resistance protein signature | 695 | 711 | - | - | |
Tsu05g03798 | 963 | PRINTS | Disease resistance protein signature | 214 | 229 | - | - | |
Tsu05g03798 | 963 | PRINTS | Disease resistance protein signature | 290 | 304 | - | - | |
Tsu05g03798 | 963 | PRINTS | Disease resistance protein signature | 382 | 396 | - | - | |
Tsu05g03798 | 963 | Gene3D | - | 347 | 431 | IPR042197 | - | |
Tsu05g03798 | 963 | ProSiteProfiles | TIR domain profile. | 16 | 179 | IPR000157 | GO:0007165 | |
Tsu05g03798 | 963 | SUPERFAMILY | "Winged helix" DNA-binding domain | 419 | 523 | IPR036390 | - | |
Tsu05g03798 | 963 | SMART | till_3 | 17 | 154 | IPR000157 | GO:0007165 | |
Tsu05g03798 | 963 | Gene3D | Ribonuclease Inhibitor | 752 | 882 | IPR032675 | - | |
Tsu05g03798 | 963 | Pfam | NB-ARC domain | 196 | 416 | IPR002182 | GO:0043531 | |
Tsu05g03798 | 963 | Gene3D | - | 14 | 179 | IPR035897 | - | |
Tsu05g03798 | 963 | SUPERFAMILY | P-loop containing nucleoside triphosphate hydrolases | 181 | 441 | IPR027417 | - |
Select | Gene | Chromosome | Start | End | Duplicated_type |
---|---|---|---|---|---|
Tsu05g03798 | Tsu-Chr5 | 49190652 | 49194291 | Dispersed/Proximal |
Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
---|---|---|---|---|---|---|---|---|
Tsu05g03798 | 18 | 811 | WRKY Transcription Factor Family | AT4G12020 | 30.826 | 8.53e-89 | 310 |
Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Tsu05g03798 | - | - | mtr:MTR_4g080777 | 1371.3 |