Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu05g03789 ATGGATGAGGATAGATACAAGAAAATTCTGAGGACTTGCATGGTTGATGAAGAGAAAGGAAGAATGAGGATAAGAACCAAAGTTTGTGTTGCTTCGGTTGTTGTCATTGTCTGCATTGCTATTGGAACAATCACAGCACACTTTGTCGAGGATCTAAATTGGGCCAACAGTTTTTATCTCTCCGTTACTTCGTTACAATGCTTGCAAAAGAGAAGCCGCGAGATGACAAAATGGATTCTTCAGAAGAAAATAACCTTAACAGATTTAGCGGCTGCAGATCTTGATCATGATGGATCAATCAGTAAATCTGACTTTGTCATATACAAGCTTAAGCAGATGGGGAAAATTACTGAGATAGACATTCTACAAATTAGCAAGCAATTTGATTCATTGGACCATGCCATGTATGGCAAGATCACTCTAGCTGACCTCATGGAAACTGTCTAA 447 0.3893 MDEDRYKKILRTCMVDEEKGRMRIRTKVCVASVVVIVCIAIGTITAHFVEDLNWANSFYLSVTSLQCLQKRSREMTKWILQKKITLTDLAAADLDHDGSISKSDFVIYKLKQMGKITEIDILQISKQFDSLDHAMYGKITLADLMETV 148
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu05g03789 148 PANTHER POTASSIUM CHANNEL, SUBFAMILY K 1 65 IPR003280 GO:0005267|GO:0016020|GO:0071805
Tsu05g03789 148 ProSitePatterns EF-hand calcium-binding domain. 93 105 IPR018247 -
Tsu05g03789 148 SUPERFAMILY Voltage-gated potassium channels 5 65 - -
Tsu05g03789 148 Gene3D - 3 68 - -
Tsu05g03789 148 PANTHER OS01G0696100 PROTEIN 68 144 - -
Tsu05g03789 148 PANTHER POTASSIUM CHANNEL, SUBFAMILY K 68 144 IPR003280 GO:0005267|GO:0016020|GO:0071805
Tsu05g03789 148 SUPERFAMILY EF-hand 59 146 IPR011992 -
Tsu05g03789 148 PANTHER OS01G0696100 PROTEIN 1 65 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tsu05g03789 Tsu-Chr5 49145363 49146447 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tsu05g03789 11 146 Ion Channels AT4G18160 40.571 1.10e-36 128
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu05g03789 K05389 - gmx:100789639 213.386