Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu05g03786 ATGGAGTTCaatatactttttttgttaCTTCTCATTGGTTCTACTTCATTGATTTTCATCTCACACTTGGCTTCAGCTGCTACACCAAAGCTCAACACTCAAGAGGTGAAGGCATTGAAGGAAATAGGGAACAAGATTGGGAAAAAAGATTGGGATTTTGGAGTGGATCCTTGTAGTGGAAAAGCAAAATGGAATATTTCTGAATCTGCAAATAGAAAAGGCTTTGAAAGTTCTGTGGTTTGTAATTGTTCTTTCAATCATGATTCTTCTTGCCATGTTGTAAGCATATTCTTGAAGGCTCAGAATCTGTCTGGCACTCTCTCACCAGAGTTTTCGAAGCTTCGTTATCTCAAAATATTGGACCTTAGTCGTAACATCATCACTGGTTCTATACCTCCACAATGGGCTACAATGAAGTTGGTCGAGTTATCTTTCATGGGAAACAGATTATCAGGACCATTCCCTAAAGTTCTTACCAATATTACAACCCTAAAAAATGTGAGTATTGAAGGAAATCTGTTTACAGGCATTATTCCAACCGAAATCGGGAAGTTGATCAACTTAGAAAAACTCATTCTTGAATCAAATGGATTCACAGGAGCATTGCCGTTCGCGCTTTCCAAGTTGACCAAGTTGACTGATTTGAGGTTAAGTGACAATAACTTCTACGGCAAGATACCTGATTTCATTAGTAAATGGACATTGATCGAAAAGCTGCACATTCAAGGTTGCGCTCTTGAGGGGCCTATACCTTCCAGCATTTCTGCATTgacaaaattaagtgatttGAGGATAACTGATTTGAAAGGTAGCAAAAGCTCTAGTTTTCCGCCACTAAATAATATGAAATCCATGAAGACACTAGTTCTGAGAAAATGCTTCCTTAAAGGAGAGATCCCAGAATATATTGGATTAATGGAAAAACTGAAAATCTTAGATTTGAGTTTCAATAGCTTGAGTGGAAAGGTACCTGATTCTTTTAACGATCTTGACAAAGTTGACTACATGTATCTTACCTCGAACAACTTATCAGGAACGATACCAAGCTGGGTCCTtgcaaataacaaaaatatTGATGTCTCTTACAATAACTTTGAATGGGAAAGCTTAAGTCCAACTGAATGTCAACGAGGGAGCGTAAACACGGTCGAGAGCTACTCTTTATCTGCGACTAAGAAAAGTAATATTCATTCATGCTTAAAAAGAAACTTCCCGTGCTCGGATAATCCACGACATTACTCCTTGCGCATTAATTGTGGCGGTAATGAAGCAAATGTAAGTGGTAAGATCTATAGTGCTGACACAGAACGAAAAGGCGCTTCAATGTTCTACTCCACTCAGGATTGGGCTCTTAGCAGCACAGGGAGCTTCATGGACAATGATATCGACTCTGATCCCTATATTGTGACCAATAATTCTAGACTTCTTAATGTCTCACAAGTCAATTCAAAACTATACACAACAGCTCGAGTTTCGCCCCTTTCACTCACATACTACGGCCTCTGTATGATAAATGGAAATTACACTGTAAACCTTCACTTTGCAGAGATCATTTTCGTCAAAGATAGGTCGTTTAACAGTCTCGGGAGACGAATATTTGATGTCTACATCCAGGGGAACTTGGTTCTGAAAGACTTTGATATCGAACGAGAAGCTGGTGGTGCCGAGAAGCCAATTGTGAAGAAATTTAATGCTAATGTCACACAGAATACTTTGAAGATTCAATTCTATTGGGCTGGAAAAGGAACCACCGGTATACCAACAAGAGGAGTTTATGGTCCTTTAGTATCTGCTATATCGGTTGATCCTAATTTTAAACCTCCGTCAGATCATGGCAACAGAATTAAGGTCATAATACTGGCAGTTGGCATAGCCAGTGGTGTTCTAGTTGTTTTCCTTATTATGCTGATTGTCTTGAGGAGGAAGGGATTGTTAGGAGGCAAGGATCCTGTGTATAAAGAGCTTAGGGGTATAGATCTGCAAACAGGATTGTTCACCTTAAGACAAATAAAAGAAGCTACCAAAAACTTTGATGCAGCAAATAAACTTGGCGAAGGTGGTTTTGGTTCTGTTTACAAGGGGCAACTACCAGATGGTACAGTAATTGCGGTAAAGCAGCTGTcgtcaaaatcaaaacaaggaAACCGCGAGTTTGTGAATGAGATAGGAATGCTATCTGGACTTCAACATCCAAATCTTGTTAAGCTTCATGGATGTTGTGTGGAAGGGAACCAGCTAATACTGATATATGAGTATATGGAAAATAATTGTCTATCTCGCATTCTTTTCGGGAAGGGATCAGACAGTAAAGAGAAACTGGACTGGCTTACCAGGAAGAAAATTTGCCTTGGCATTGCTAAAGCTTTGGCTTATCTTCATGAAGAGTCgagaattaaaattatacatagGGATATAAAGGCAAGTAATGTGTTGCTGGACAAGGATTTTAATGCCAAAATTTCAGATTTTGGTTTGGCCAAACTCATTGAAGATGACAAAACACACGTTAGCACCCGGATTGCAGGAACGATTGGTTATATGGCTCCTGAGTATGCAATGCGCGGTTACTTAACAGACAAAGCAGATGTTTATAGCTTTGGCGTGGTTGCATTGGAAACTATCAGTGGAAAGAGCAATACAAATTACAGGCCGGATGATGAATTTTTCTACCTGCTTGATTGGGCCTATGTTTTACAAGAGAGAGGAACTCTTCTGGAGCTAGTTGATCCAGATTTGGGTTCAGAATATTCAACTGAGGAAGCCACTGTAATGCTAAATGTGGCTCTCTTGTGTACTAACGCAGCTCCTACACTTAGGCCAACAATGTGCCAAGTTGTAAGCATGCTTGAAGGTTGGACCGACATTCAGGATCTCCTATCGGATCCGGGATATTCAGCTGCTGGTTCAAGTTCCAAACATAAGAGCATAAGAAGTCACTTCTGGGAGAATCCAAGCAGATCACAAAGCATGTCAATACCTACTATTTATACCGATTCCACAAACTCGCATGTTGAAACAGAAGAGAGCCATCATCTTGTAAAAATTAACTCGGTTGGATCAGACGAATGA 3069 0.3904 MEFNILFLLLLIGSTSLIFISHLASAATPKLNTQEVKALKEIGNKIGKKDWDFGVDPCSGKAKWNISESANRKGFESSVVCNCSFNHDSSCHVVSIFLKAQNLSGTLSPEFSKLRYLKILDLSRNIITGSIPPQWATMKLVELSFMGNRLSGPFPKVLTNITTLKNVSIEGNLFTGIIPTEIGKLINLEKLILESNGFTGALPFALSKLTKLTDLRLSDNNFYGKIPDFISKWTLIEKLHIQGCALEGPIPSSISALTKLSDLRITDLKGSKSSSFPPLNNMKSMKTLVLRKCFLKGEIPEYIGLMEKLKILDLSFNSLSGKVPDSFNDLDKVDYMYLTSNNLSGTIPSWVLANNKNIDVSYNNFEWESLSPTECQRGSVNTVESYSLSATKKSNIHSCLKRNFPCSDNPRHYSLRINCGGNEANVSGKIYSADTERKGASMFYSTQDWALSSTGSFMDNDIDSDPYIVTNNSRLLNVSQVNSKLYTTARVSPLSLTYYGLCMINGNYTVNLHFAEIIFVKDRSFNSLGRRIFDVYIQGNLVLKDFDIEREAGGAEKPIVKKFNANVTQNTLKIQFYWAGKGTTGIPTRGVYGPLVSAISVDPNFKPPSDHGNRIKVIILAVGIASGVLVVFLIMLIVLRRKGLLGGKDPVYKELRGIDLQTGLFTLRQIKEATKNFDAANKLGEGGFGSVYKGQLPDGTVIAVKQLSSKSKQGNREFVNEIGMLSGLQHPNLVKLHGCCVEGNQLILIYEYMENNCLSRILFGKGSDSKEKLDWLTRKKICLGIAKALAYLHEESRIKIIHRDIKASNVLLDKDFNAKISDFGLAKLIEDDKTHVSTRIAGTIGYMAPEYAMRGYLTDKADVYSFGVVALETISGKSNTNYRPDDEFFYLLDWAYVLQERGTLLELVDPDLGSEYSTEEATVMLNVALLCTNAAPTLRPTMCQVVSMLEGWTDIQDLLSDPGYSAAGSSSKHKSIRSHFWENPSRSQSMSIPTIYTDSTNSHVETEESHHLVKINSVGSDE 1022
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu05g03786 1022 Gene3D Ribonuclease Inhibitor 263 378 IPR032675 -
Tsu05g03786 1022 CDD STKc_IRAK 683 951 - -
Tsu05g03786 1022 ProSitePatterns Protein kinases ATP-binding region signature. 683 705 IPR017441 GO:0005524
Tsu05g03786 1022 Pfam Malectin domain 414 599 IPR021720 -
Tsu05g03786 1022 Gene3D - 411 603 - -
Tsu05g03786 1022 MobiDBLite consensus disorder prediction 1003 1022 - -
Tsu05g03786 1022 PANTHER PROMASTIGOTE SURFACE ANTIGEN PROTEIN PSA 69 987 - -
Tsu05g03786 1022 PANTHER LEUCINE-RICH REPEAT TRANSMEMBRANE PROTEIN KINASE-RELATED 69 987 - -
Tsu05g03786 1022 ProSiteProfiles Protein kinase domain profile. 677 953 IPR000719 GO:0004672|GO:0005524|GO:0006468
Tsu05g03786 1022 Gene3D Transferase(Phosphotransferase) domain 1 753 961 - -
Tsu05g03786 1022 SMART serkin_6 677 953 IPR000719 GO:0004672|GO:0005524|GO:0006468
Tsu05g03786 1022 Gene3D Ribonuclease Inhibitor 197 261 IPR032675 -
Tsu05g03786 1022 ProSitePatterns Serine/Threonine protein kinases active-site signature. 800 812 IPR008271 GO:0004672|GO:0006468
Tsu05g03786 1022 Gene3D Phosphorylase Kinase; domain 1 651 752 - -
Tsu05g03786 1022 SUPERFAMILY Protein kinase-like (PK-like) 661 976 IPR011009 -
Tsu05g03786 1022 MobiDBLite consensus disorder prediction 1000 1022 - -
Tsu05g03786 1022 Pfam Protein tyrosine and serine/threonine kinase 680 949 IPR001245 GO:0004672|GO:0006468
Tsu05g03786 1022 Gene3D Ribonuclease Inhibitor 34 196 IPR032675 -
Tsu05g03786 1022 SUPERFAMILY L domain-like 81 365 - -
Tsu05g03786 1022 Pfam Leucine rich repeat 285 343 IPR001611 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tsu05g03786 Tsu-Chr5 49115932 49124581 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tsu05g03786 215 1013 Receptor kinase-like Gene Family AT1G07650 63.321 0.0 1002
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_DLSV Tsu05g03786 PK_Tyr_Ser-Thr 3.5e-49 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu05g03786 - - gmx:100784864 1649.8