Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu05g03771 ATGGAAGAAGGAGACATGGAAACAGATAGAAACATAACCATACCAGCATTTCTCACCCAAAAGATGAAtactactagtactactacTGCTACTATTACTACCGAAAAGTCTCTGCATGTCTTCAGGCGAAGCCGAAGACGGTGCAGAGACAGTGGTAGTAAGGAGGAGATGATGTTGATAAAGGAAGATGCTGAggagaaagaagatgaagaagatggtgatgatagagaagagatagagagaaagaTTCATGCATTGCAAAGGATTGTACCAAATGGTGAGTCTTTTGGTGTGGACAAACTTTTTGATGAAACTGCTGGCTATATTATTGCTTTACAATATCAAGTCAAAGCTTTGAAAGCTCTTACTGGTTTCTTTGAAAAGTTGGAGAAAGACAAGACTAAACTTGGAGGCTATCGTTTCTTTCTCTATCACTTTCCCGGAAAATCCACCAATTTTCCCAAGAAAATTCATCCTCCATTTTCTCGCTTCACTCTAACGCATCACACTCTTCACGAATTAGCCATGGCGGACGACGGCGTTTCCAACGGCGGCGTCGATAATCAGTACGAGGAACAATCAGTGACGAAGATCTCAGCGTTGGAGCAAGAAAGAGACGAATTGGTTACTGAGAACAATGCGAAGAAAGAGGAGATCAAGAAACTGACTGATGAACTCGAGGAACTGAGGAGCAAGAGTGAGGAAAAGAGGGAGAAGATCGAAGAGTTGCTGGCGGAAGTTGAAAGGTCGCAAGATTCGGTGAAGGCTGCGGAGGTTATTGCGGCTAGAGCGGCGGATCTTGAGACGCAAGTGTCGAGGATGCAACACGATATGATATCGGATATGAGTGCTTCGGAGGAATTGAAGAAAGAGTGTGATGGATTGAAGGAGGTTTTGAAAGAGAAGGAGTCTAGGGTTGAGGAATTGGTGAAGGAAGTTGAATCTTTGAAGAAGGTGAAAGCGGAGAGTGAGGCGAGGTTGAAGGATTTAGAGAAGAGGATTGGTGTTCTTGAGATGAAGGAAATTGATGAGAGGAATAAGAGGATTAGGGTTGAAGAGGAGTTGAGGGATAAGATTGGTGAGAAAGATAGGGAAATTGAGGGTTTTAGGAACAAGGTTGAGGAATTGGAGAAGGTTGCTGGTGAGAACAGTCATGAGATAGGGGATTGGGTTAAAGAGAAACTGAGTTTGGAGAAGGCGCTTAGAGAATCTGAGGAGAAAGCAAAGGTTTTTGAATCGAATATTATTCAATTGCGCAATGAAGCAGGAGAAGCTGAGAAGATGATCAGATCATTGAATGAAAAAGCTGTTGAGATAGTCGATAGAGATATAAACGGGAATGGGACAGAGCGAGAAGGGGGGAATGAACGCAAGTTGCAGTGGCCGATTGTTGCAGCGGGAGCAGGATCTACGGTAGCTGTTGCAGCTTTGATCTATGTGTACTGTGCGAAGCGGAGTTGA 1461 0.4196 MEEGDMETDRNITIPAFLTQKMNTTSTTTATITTEKSLHVFRRSRRRCRDSGSKEEMMLIKEDAEEKEDEEDGDDREEIERKIHALQRIVPNGESFGVDKLFDETAGYIIALQYQVKALKALTGFFEKLEKDKTKLGGYRFFLYHFPGKSTNFPKKIHPPFSRFTLTHHTLHELAMADDGVSNGGVDNQYEEQSVTKISALEQERDELVTENNAKKEEIKKLTDELEELRSKSEEKREKIEELLAEVERSQDSVKAAEVIAARAADLETQVSRMQHDMISDMSASEELKKECDGLKEVLKEKESRVEELVKEVESLKKVKAESEARLKDLEKRIGVLEMKEIDERNKRIRVEEELRDKIGEKDREIEGFRNKVEELEKVAGENSHEIGDWVKEKLSLEKALRESEEKAKVFESNIIQLRNEAGEAEKMIRSLNEKAVEIVDRDINGNGTEREGGNERKLQWPIVAAGAGSTVAVAALIYVYCAKRS 486
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu05g03771 486 Coils Coil 198 260 - -
Tsu05g03771 486 Coils Coil 352 379 - -
Tsu05g03771 486 Coils Coil 394 435 - -
Tsu05g03771 486 SUPERFAMILY Tropomyosin 257 436 - -
Tsu05g03771 486 Gene3D - 192 354 - -
Tsu05g03771 486 PANTHER TRANSCRIPTION FACTOR PAR1 22 136 - -
Tsu05g03771 486 MobiDBLite consensus disorder prediction 49 77 - -
Tsu05g03771 486 Coils Coil 285 340 - -
Tsu05g03771 486 MobiDBLite consensus disorder prediction 62 76 - -
Tsu05g03771 486 PANTHER TRANSCRIPTION FACTOR IBH1-LIKE 1 22 136 IPR044660 GO:0006355
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tsu05g03771 76 160 Basic Helix-Loop-Helix Transcription Factor Gene Family AT3G21330 34.831 7.88e-06 46.2
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu05g03771 - K10374 mtr:MTR_5g091710 390.193