Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu05g03770 ATGCATAAAGGAAAGAAATCATTGGAGATGGACTTTTTCTCGGATTATGGCGATGCCAACCGGTATAAAATTCAAGAAGTAATTGGGAAAGGTAGTTATGGTGTTGTTTGTTCAGCTGTTGATACTCATACTGGTGAAAAAGTTGCAATTAAAAAGGTTCATGGTATCTTTGAGCATATATCCGATGCTGCACGTATTCTTCGTGAGATAAAGTTGCTCAGACTTCTTCGACATCCCGATATTGTTGAAATTAAGCACATTATGTTGCCTCCTTCAAGCAGAGAATTCAAAgatatatatgttgtttttgAGCTTTTGGAATCTGATCTGCATCAAGTCATTAAAGCCAATGCCGACTTAACAAAAGAGCACTATCAGTTTTTTCTATATCAGTTACTTCGAGCATTGAAGTATATTCACACTGCAAATGTCTATCATCGAGACTTGAAGCCAAAGAATATTCTGGCCAATGCAAACTGTAAACTTAAAATCTGTGATTTTGGGTTAGCTAGAGTTGCTTTCAGTGACACTCCAACAACTGTATTTTGGACGGACTATGTTGCTACAAGGTGGTATAGAGCACCCGAGCTCTGTGGATCATTTTACTCAAAGTATACGCCGGCAATTGATATCTGGAGTATAGGATGCATCTTTGCTGAAGTATTAATAGGAAAACCACTTTTCCCCGGAAAAAGTGTTGTACATCAGTTGGATCTGATCACAGATCTGCTTGGGACCCCCTCAATGGATGCTATATCTCGgGTACGCAATGATAAAGCAAGGAGATACCTAACTAGTATGAGGAAAAAGCAGCCTATTCCATTTGCACAAAAATTTCCTAACGCAGATCCTTTATCACTACGACTACTGGAAAGGTTGCTTGCCTTTGATCCAAAAGACCGGCCTACTGCTGAAGAGGCATTAGCTGATCCTTACTTCAAGGGACTTGCGAAAATTGAAAGGGAACCATCCTGTGAGCCCATTACACAAAtggagtttgaatttgaaaagagAAGAGTAACAAAGGGAGAAATCCGAGACTTGATTTTCCATGAGATTCTAGAGTACCATCCTCAACTAAATGGAACAGAGAGAACTAATTTTCTTTATCCAAGTGCTGTTGATCAATTTGACAAGCAGTTCACGCATCTTGAGGAAACTGGTGGTAAAAGTGATCCTGTTGTGCCACTTGAAAGAAAACATGCATCGCTTCCCAGGTCAACAATCGTACATTCAAATATGACACCCCAAAAAGAGCAGTCGAATATTGCTTCCCACAAAAACCGGCAAACAACTGAGGAGTATAATACTAAATATATGGAATCCAGCGGCATTCGAGGACTGCAAATAATTCCATTGGAAACACCTGGTAAAGTTGTTAGGCCAGTTGTTAAATATGAGCATGGGAGTATAGTCAATGATTCGAGAACATCAATGAAAGGCAAAGCATACCCAACAGTGTTGAATCAAGGCCGAAGTAGCATCAAGTTTAACCATAAGTATTGA 1506 0.3871 MHKGKKSLEMDFFSDYGDANRYKIQEVIGKGSYGVVCSAVDTHTGEKVAIKKVHGIFEHISDAARILREIKLLRLLRHPDIVEIKHIMLPPSSREFKDIYVVFELLESDLHQVIKANADLTKEHYQFFLYQLLRALKYIHTANVYHRDLKPKNILANANCKLKICDFGLARVAFSDTPTTVFWTDYVATRWYRAPELCGSFYSKYTPAIDIWSIGCIFAEVLIGKPLFPGKSVVHQLDLITDLLGTPSMDAISRVRNDKARRYLTSMRKKQPIPFAQKFPNADPLSLRLLERLLAFDPKDRPTAEEALADPYFKGLAKIEREPSCEPITQMEFEFEKRRVTKGEIRDLIFHEILEYHPQLNGTERTNFLYPSAVDQFDKQFTHLEETGGKSDPVVPLERKHASLPRSTIVHSNMTPQKEQSNIASHKNRQTTEEYNTKYMESSGIRGLQIIPLETPGKVVRPVVKYEHGSIVNDSRTSMKGKAYPTVLNQGRSSIKFNHKY 501
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu05g03770 501 CDD STKc_TDY_MAPK 21 358 - -
Tsu05g03770 501 ProSitePatterns MAP kinase signature. 57 160 IPR003527 GO:0004707|GO:0005524|GO:0006468
Tsu05g03770 501 ProSitePatterns Protein kinases ATP-binding region signature. 28 52 IPR017441 GO:0005524
Tsu05g03770 501 Pfam Protein kinase domain 22 313 IPR000719 GO:0004672|GO:0005524|GO:0006468
Tsu05g03770 501 SUPERFAMILY Protein kinase-like (PK-like) 18 317 IPR011009 -
Tsu05g03770 501 PANTHER MITOGEN-ACTIVATED PROTEIN KINASE 7 462 - -
Tsu05g03770 501 SMART serkin_6 22 313 IPR000719 GO:0004672|GO:0005524|GO:0006468
Tsu05g03770 501 Gene3D Transferase(Phosphotransferase) domain 1 108 336 - -
Tsu05g03770 501 Gene3D Phosphorylase Kinase; domain 1 37 359 - -
Tsu05g03770 501 PANTHER MITOGEN-ACTIVATED PROTEIN KINASE 7 462 - -
Tsu05g03770 501 ProSiteProfiles Protein kinase domain profile. 22 313 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tsu05g03770 Tsu-Chr5 49001975 49008372 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tsu05g03770 2 428 MAP Kinase Gene Family AT2G42880 83.796 0.0 750
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CMGC_MAPK Tsu05g03770 Pkinase 5.8e-66 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu05g03770 - - aprc:113848523 815.839
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tsu03g01427 03 13681546 13687850 Tsu05g03770 05 49001975 49008372 PCT