Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu05g03763 ATGTACAAAAAGGAACAAATTGCTTTTCCAATATTTTACCATGTTGATCCATCGGATGTacgaaatcaaagaaagagcTATGGGAAAGCCATGTTTGCTCATCAGAAGAGGTTTGGAAAAGACTCGGAAAAAATAAACACATGGACAGCTGCATTGTCTGACGTTGCAAACTTGAAAGGTCACCATATCAACACTGGGTTTGAAATCGATCATGTTAAAGAGATTGCAGAAAAGGTCCATGCTAATATAGCTCCTAAACCATTAATTGATGGCGAGAATCCAGTTGGACTTGATCAACAAATAGAAGAAGTGAAGTCACTTCTAGACTTGAAGCCAAAAGACGATACTGTATGCATGTTGGGCATAATTGGACTTGGCGGAATAGGGAAAACTGAACTTGCCAAAGCGTTGTATAACAAGATTGTGCACCAATTTGAAGATGCAAGTTTTCTTGCCAATGTTAGAGAGAAATTGAACAAAACCAATGTCCCAGAAGATCTACAAAAGACCCTTCTATCGGAGATGTTTGAGAAACAAGAAACCGAGTGGGGAAGTACATGTAAAGGAATCGACGAAATAAAACACAAGCTTGGAAGAAAAAAGGTTCTTTTGGTTCTTGACGATGTTAATGAGATGAAACAATTAGAAAACTTGGCAGGAGGAAGTGATTGGTTTGGTCCAGGTAGTAGGATCATTATAACTACAAGGGACAAAGGTTTGCTCATGGGTAATCGtctaataaaagtaattaagaCTTATGTAATGACTGAACTTAATTATCAACATTCTCTTGAGTTATTTTGTAGAAATGCCTTTGGAAAAAGCAATCATAAAACAGGATACGAAGCATTGACTTCTCGTGCCGTTGGTTATGCAAAAGGTCTTCCATTGGCTTTAAAAGTTATAGGCTCCAATTTGGCTactagaaaaagtttaaaagcTTGGGAGTCTGCATTGGAAGATTATCAGAGAATTCCCCGTAAAGGGATTCAAGACGTGCTTAAAGTAAGCTATGATGTATTGGAGTCTAATGCTCAAAGTGTTTTCCTGGATATAGCTTGCTTCTTCAAAGGGGAAAGAATAGAATATGTTGAAGAAATACTGAATGAATTCAGTGCTGTATCAAATATTGAAGAGCTTGTTAATAAATCTCTCTTGAATATTGATAATGGATACTTGAATATGCATGACCTAATACAAGATATGGGTAGAGAGATTGTTAGGCAAGAGGCGCCGAATAATCCCGCAAAACGTAGTAGATTATGGTGTCATGAAGATGTCGTTGATGTATTATCAGCCAATGATTGTGGAAGTGATACAATTCAAGGTATAAAGCTTGTTACTTGCCAACTTATAACCAAAGTAGATTGGAATTTTGAGAAGATGAATCGTCTCAGAATTCTCATCGTTCGAGATGGAAGTTTTTCATCAGGGCCTAAACATCTACCAAATCATCTAAGGCTACTTGACTGGAGGACATATTATTCAAAGACTTTCCCACCAAAATTTTATCCGAAGAATATCATCATCTTAAATTTGCCTTTTAGTCGACTTACAATGGAAGATCCATTTAAGCAATTTTCGTATTTGACTGTCATCAATTTTTCGAATAATAAATCTATCACAGCAATGCCGGATGTGTCCAAAGTTGAAAATTTGAGAGAATTGCGACTTGATTATTGTTCAAACTTAACTATGTTTCATGAATCTGTTGGATTTCTCAAACATCTTGTCCACTTAAGTGCTCCGGGATGCACCAAACTTGAAAACTTTCTGCAAAGAATGTTTTTACCATCTCTAGAAGTCCTTGTACTTTATGAGTGTGGAAAACTTGAACACTTTCCAGATATAGTGAAAAAGATGTATAAACCATTGAAGATTCATATGAGTTATACGTCTATTAAGAAGCTGCCAAATTCCATTAGTAAACTTATTGGACTTGTTTCAATAGATATGAAATATAGCGAGAAACTAGAATATCTACCAAGTAGCTTATTCAGGTTACCAAATGTTGTTACTTTCAACTTCGGAAGTTGTTCTAAACATGGTGAATCTTTCAAAAGATTGCTACCTGATAACCCTTCTTCAGAAACCAATGAACGTTCAACATTAAAAACAATTCATGTTGAAAATAGTAAATTGTCAGATGAAGATATTGAGGCAATTCTCATATGTTTTCCAAATTTAGAAGAATTGATTGTATCATGTAATTACAATTTGGTCTCTCTCCCAGCTTGCATTAAAGAGTCTAATCACTTGACATATCTTGATGTTAGTTGGTGCGAAAAGCTTAAAGAAATTCCCGAATGCACCAACTTGAGAATTCTGAACATCTGTGGTTGTAGGAGTCTTACACACATTTCAGAGTTGCCATGCACTATTCAAATAATCGATGCAAGAAAATGTATCAACTTTTCTTCGGAGACATCGGACATGCTATGGGATCAGGTGAAAAAAGATAGGCATGGATTAGAAATTGTGATGCCTAAAACCAAGATTCCAAAATGGTTCGATTATATATGCAAAGGAGGAATTCCCTCTTTATGGATTTATGAGAAGTTTTCCAATGTTGCTTTAGCATCGCTATTCGAAGGTGAGATAGCATATGTTCAGGATGTTCAACTTCATTTAGCTATAAACGGTCAATATGTCCCTCGCAAAGGCTATTACAACTTCAGCATTGGATCGGATCATGTTTTAGTTTGTGATCTACGCCACTTATTCAATGACGAGGAGTGGCTAAGCCTTGATTGGTTACTTCTTAAGAATGAATGGAATCTTGTGCAAATTTCATATGAAATCAACAAGATTCATGACCCAACGGACAATGACATGACACTAAGTGAATGGGGAGTTTTTATGTACAAATAA 2871 0.3539 MYKKEQIAFPIFYHVDPSDVRNQRKSYGKAMFAHQKRFGKDSEKINTWTAALSDVANLKGHHINTGFEIDHVKEIAEKVHANIAPKPLIDGENPVGLDQQIEEVKSLLDLKPKDDTVCMLGIIGLGGIGKTELAKALYNKIVHQFEDASFLANVREKLNKTNVPEDLQKTLLSEMFEKQETEWGSTCKGIDEIKHKLGRKKVLLVLDDVNEMKQLENLAGGSDWFGPGSRIIITTRDKGLLMGNRLIKVIKTYVMTELNYQHSLELFCRNAFGKSNHKTGYEALTSRAVGYAKGLPLALKVIGSNLATRKSLKAWESALEDYQRIPRKGIQDVLKVSYDVLESNAQSVFLDIACFFKGERIEYVEEILNEFSAVSNIEELVNKSLLNIDNGYLNMHDLIQDMGREIVRQEAPNNPAKRSRLWCHEDVVDVLSANDCGSDTIQGIKLVTCQLITKVDWNFEKMNRLRILIVRDGSFSSGPKHLPNHLRLLDWRTYYSKTFPPKFYPKNIIILNLPFSRLTMEDPFKQFSYLTVINFSNNKSITAMPDVSKVENLRELRLDYCSNLTMFHESVGFLKHLVHLSAPGCTKLENFLQRMFLPSLEVLVLYECGKLEHFPDIVKKMYKPLKIHMSYTSIKKLPNSISKLIGLVSIDMKYSEKLEYLPSSLFRLPNVVTFNFGSCSKHGESFKRLLPDNPSSETNERSTLKTIHVENSKLSDEDIEAILICFPNLEELIVSCNYNLVSLPACIKESNHLTYLDVSWCEKLKEIPECTNLRILNICGCRSLTHISELPCTIQIIDARKCINFSSETSDMLWDQVKKDRHGLEIVMPKTKIPKWFDYICKGGIPSLWIYEKFSNVALASLFEGEIAYVQDVQLHLAINGQYVPRKGYYNFSIGSDHVLVCDLRHLFNDEEWLSLDWLLLKNEWNLVQISYEINKIHDPTDNDMTLSEWGVFMYK 956
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu05g03763 956 PANTHER RESISTANCE PROTEIN (TIR-NBS-LRR CLASS), PUTATIVE-RELATED 9 940 - -
Tsu05g03763 956 Gene3D - 257 342 IPR042197 -
Tsu05g03763 956 Gene3D Ribonuclease Inhibitor 423 624 IPR032675 -
Tsu05g03763 956 Gene3D Ribonuclease Inhibitor 625 822 IPR032675 -
Tsu05g03763 956 SUPERFAMILY L domain-like 395 794 - -
Tsu05g03763 956 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 86 352 IPR027417 -
Tsu05g03763 956 Pfam NB-ARC domain 98 343 IPR002182 GO:0043531
Tsu05g03763 956 SUPERFAMILY Toll/Interleukin receptor TIR domain 3 60 IPR035897 -
Tsu05g03763 956 Pfam TIR domain 3 79 IPR000157 GO:0007165
Tsu05g03763 956 Gene3D - 1 82 IPR035897 -
Tsu05g03763 956 PRINTS Disease resistance protein signature 119 134 - -
Tsu05g03763 956 PRINTS Disease resistance protein signature 292 306 - -
Tsu05g03763 956 PRINTS Disease resistance protein signature 548 564 - -
Tsu05g03763 956 PRINTS Disease resistance protein signature 196 210 - -
Tsu05g03763 956 Gene3D - 83 248 IPR027417 -
Tsu05g03763 956 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN 9 940 IPR044974 GO:0006952
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tsu05g03763 Tsu-Chr5 48947495 48952655 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tsu05g03763 2 679 WRKY Transcription Factor Family AT4G12020 31.534 1.98e-79 281
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu05g03763 - - mtr:MTR_5g090940 1214.52