Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu05g03753 ATGAACGGTCTCAGAATTCTCATTGTTCAATATACAGCCTTTTCATCTGAGCCTAAACATCTTCCAAATCATTTAAGGCTACTTGATTGGGATGTATATCCTTCAAAGACTTTCCCACCAAAATTTTACCCAAGGAATATCATCATCTTAAATTTGCCTAATAGTCAACTTACAATGGAAGAGCCATTTAAGCAATTTTCATATCTAATTCTCATGAATTTCTCCAATAATCAATCTATCACAACAATGCCTGATGTGTCCAAAGTTCAAAATTTGAGAGAATTGCGACTTGATGATTGTAAGAACTTAACCACGGTTCATAAATCCATTGGATTTCTCAAACATCTTGTCCACTTAAGTGCTTCGGGATGCACCAAACTTGAAAATTTTCTGCAAAGAATGTTTTTACCATCTCTAGAAGTCCTTAAACTTGATTGGTGTGAAAAACTTGAACACTTCCCAGATATAGTGAACGAGATGAATAAACCATTGAAGATTCATATGATAGGTACCTCTATTAAGAAGCTGCCAAATTCTGTAGGTAATCTTGTTGGACTTGTTTCAATAGACATGGAATGTAGCACGAAACTAGAATATCTACCAAGTTGCTTATTCAGGTTACCAAAGTTTGTTGCTTTTGACTTTGGAAGTTGTCCTAAACTTGGTGCATCTTTCAAAAGATTTCTACCTGATAGCCCTTCAGAAGGCAATGAACGTTCAACATTAAAAACAATGcgttttgaagaaagtggtTTGTCAGATGACGATATTCAGGCAATTCTCATATGTTTTCCAAAATTAGAAGAATTGTTTGTATCAAAGAACAATTTGGTCTCTCTGCCAGCGTGCATTAAAGAGTCTACTCACTTGACAAATCTTGATGTTAGTGATTGCAAAAAGCTTAAAGAAATTCCCCAATGCACCAACTTGAGAATTCTGAATGTAGATGATTGTACGAGTCTTGCACACATTTCAGAGTTGCCATCCACTATTCAAAAAATCGATGCAAGAAAATGCTTCAACTTTTCTCCAGAGACATCAAACTTGCTATGGGATCAGGTGAAAAAACAGAGGCATGGATTAGAAATTGTGATGCCTGGAATAGAGGTTCCAAAATGGTTCAATTATATATGCAAAGATGGAATTCCGTGTTTATGGGTTCGTGGGAAGTTTCACAATGTTGCTTTAGCGTTGGTGTTCCAATATGCGGATGGGAAGGAAAGAATAGATCCGGATTTTGTTCAACTTCATTTGGTTATCAACGGTCAATTTGTCCCTCAAAAAGTCTATTACAACTTCATAATTGAACCGCATCATGTTTTAGTTTGTGATCTACAACTCTTATTCAATGATGACGAGTCGATAAACCTTGATGCATTGCATGAATGGAATCAAGTGCAAATTTCATATGAAGTCAAGAACAGTATCGTGACACTAAGTGAATGGGGagtttttttgaacaaacaaGGAGCTGTTGACGTGACAGGACGTTGGGATGGTTACACCTATGGTTTCACCTATGATGTTTTCCTCAGTTTTAGAGGGAAAGACACGCAGATAAATTTTATTGCATATCTTCGCGAAGCATTTCAAATGAGGGGAATCAATGCTTTCTATGACGATAATAATCTGAGAATAGGGCAAGATAATTCACCTGCACTTTGCAAAGCCATAGAAGAATCTCATATCTCAGTTATTGTTTTATCTGAGGATTATGCATCTTCTACATGGTGCCTTGATGAACTCGCAAAGATCATGGAATGTACgaaaagaaacaacaaacaaaTTGCTTTTCCAATTTTTTACCATGTTGATCCATCGGATGTACGACATCAAAGAAAGAGCTATGGAGAAGCCATGGTTGCTCATCAGAAGAGGTTTGGAAAAGagtcagaaaaaataaaagcatgGACAGCAGCATTATCTGAAGTGGCAGACTTGAAAGGTCACCACATCCACACTGGATTCGAAATCAATCATGTTAAAGAGATTGCCGATAAGGTCCATGCTAATATAGCAACTAAACCTTTAATTGATGGTGAGAATCCAGTTGGACTTGATCAACGCATAGAAGAGGTGAAGTCCCTTCTAGACTTGAAGCCAAATGACGACACTGTATGCATATTAGGCATAATTGGACTTGGCGGAATAGGAAAAACTGAACTTGCCAAAGCATTGCATAACAAGATTGTGCGCCAATTTGAAGCGGTAAGTTTTCTTGCCAATGTTAGagagaaatcaaacaaaatcaatgGCCTAGAAGATCTGCAGAAGACccttttatcggagatgtttcAGCAGTCAGGAACCGAGTTGGGAAGTACAAGTAAAGGAATCTCCGAATTAAAACACAAGCTTGGAAGGAAAAAGGTTCTTTTGGTTGTTGACGATGTTGATGAGAGGAAACAATTAGAAAACTTGGCAGGAGGAAGTGATTGGTTTGGTCCAGGTAGTAGGATAATTATAACTACGAGAGACAAAGGTTTGCTCATGGGTACTCATCCAATAAAAGTTGAGGCTTATGAAATGCCTAAACTTAATGATCCACATTCTCTTGAGCTGTTCTGTCTAAATGCCTTTGGAAAAAGCCATCCTAAAACAGGATATGAAGCTATGTCTTCTCGTGCTGTTGGTTATGCAAAAGGTCTTCCATTGGCTTTAAAAGTTATAGGCTCCAATTTGGCTACTAGAAACAGTTTAAAAGATTGGGAGCATGCATTGGAAGATTATGAGAGGATTCCCCGTAAAGAGATTCAAGATGTGCTTAAAGTAAGCTATGATGTGTTGGAGCCTTATGCACAAAGACGTTGGGATGGTTACACCTATGGTTTCACCTATGATGTTTTCCTCAGTTTTAGAGGGAAAGACACGCAGATAAATTTTATTGCATATCTTCGCGAAGCATTTCAAATGAGGGGAATCAATGCTTTCTATGACGATAATAATCTGAGAATAGGGCAAGATATTTCACCTGCACTTTGCAAAGCCATAGAAGAATCTCATATCTCAGTTATTGTTTTATCTGAGGATTATGCATCTTCTACATGGTGCCTTGATGAACTCGCAAAGATCATGGAATGTACgaaaagaaacaacaaacaaaTTGCTTTTCCAATTTTTTACCATGTTGATCCATCGGATGTACGACATCAAAGAAAGAGCTATGGAGAAGCCATGGTTGCTCATCAGAAGAGGTTTGGAAAAGagtcagaaaaaataaaagcatgGACAGCAGCATTATCTGAAGTGGCAGACTTGAAAGGTCACCACATCCACACTGGATTCGAAATCAATCATGTTAAAGAGATTGCCGATAAGGTCCACACTAACATAGCACCTAAACCTTTAATTGATGGCGAGAATCCAGTTGGACTTGATCAACGCATAGAAGAGGTGAAGTCCCTTCTAGACTTGAAGCCAAATGACGACACTGTATGCATATTAGGCATAATTGGACTTGGCGGAATAGGAAAAACTGAACTTGCCAAAGCATTGTATAACAAGATTGTGCGCCAATTTGAAGCTGTAAGTTTTCTTGCCAATGTTAGAGAGAAATCAAACACAATCAATGGCCTAAAAAATCTGCAGAAAACCCTTTTAGAGTGGGGAAGTACAAGTAAAGGAATTAACGAACTAAAACACAAGCTTGGAAGGAAAAAGGTTCTTTTGGTTCTTGACGATGTTGATGAGAGGAAACAATTAGAAAACTTGGCAGGAGGAAATGATTGGTTTGGTCCAGGTAGTAGGATCATTATAACTACAAGGGACAAAAGTTTGCTCATGGGTACTTATCCAATAGAAGTAATTAAGACTTATGCAATGACTGAACTTAATGAACAACTTTCTCTTGAGTTGTTTTGTAGAAATGCCTTTGGAAAAAGCAATCCTAAAACAGGATTTGAAGCTGTATCTTCTCGTGCCGTTGGCTATGCAAAAGGTCTTCCATTGGCTTTAAAAGTTATAGGCTCCAATTTGCGTactagaaaaagtttaaaagcTTGGGAGGATGCATTGGAAGATTATGAGAGGATTCCCCGTAAAGAGATTCAAGATGTGCTTAAAATAAGCTATGATGTGTTGGAGCCTTCTGCACAAAGTGTTTTCCTGGATATAGCTTGCTTCTTCAAAGGGGAAAGCATAAAATATGTTGAAGAAATACTTGAAGAATTCAGTGCAGCATCAAATATTGAAGAGCTTGTTAATAAATCTCTCTTGAATGTTGATGATGGATACTTGAATATGCATGACCTAATACAGGATATGGGTAGAGAGATTGTTAGGCAAGAGGCACCAAATAATCCTGCAAAACGCAGCAGATTATGGTTTCATCAAGATATCATTGATGTATTATCCTCCAATGATTCTgGGAGTGATGCAATTCAAGGGATATTGTTTGATCCTCCAGGAGAAGTAGATTCGGAAGGTTttccaagaaaaataaaagtagatTGGAATCATATTGTTTTTGAGAAGATGCACTATCTTCGAATTCTCATTGTTAGATGTATAACATTTTCATCCAAGCCTAAACGTCTTCCAAATCATTTAAGGCTACTTGACTGGAAGAATTACCCTTCAAAGACTCTCCCACCAGAATTTTATCCGAGCAAAATCATCAACTTAAATTTGCGTAATAGTGAACTTACAATCAAAAAACCATTTGAGCAATTTTTATATCTGACTGTAATGGATTTCTCACATAATAGTTTTATGAAAACAATGCCTGATGTGTCCAAAGTTGAAAATTTGAGGGAATTGCGACTTGATCGTTGTGATAACTTAACTACGGTTCATGAATCCATTGGATTTCTCAAACATCTTGTCCACTTAAGCGCTTCGTTATGCGGAAACCTTAAAATCTTTCTGCAAAAAATGTTTTTACCATCTCTAGAAGTCCTTGACCTTAATTGTTGTGAACAACTTGAACACTTCCCAGATATAGTGAAGGAGATGAATAAACCATTGAAGATTTATCTGAGGTATACGTCTATTAAGAAGCTGCCAAATTCTGTTGGTAATCTCATTGGACTTGTTTCAATTTACATGGGACATAGCCATAAACTAGAATATCTACCAAGTAGCTTATTCAGGTTACCAAATGTTGTTGCTTTTCAATTTGGAGGATGTTCTAAACTTGGTGAATCTTTCAAAAGATTTGTACCTGATAGCCCTTCAGAAGCCAATGAACATTCAACATTAAAAACAGTGTATTTTTCATGGAGTGGTTTGTTAGATGAAGATATTCATACAATTCTCATATGTTTTCCAAATTTAGAAGAATTGAATGTATCATCTAGTGACAATTTGGTCTCTCTCCCAGCTTGCATTGAAGAGTCTAATCACTTGACAAATCTTGATGTTAGTTGGTGCAAAAAGCTTAAAGAAATTCCCGAATGCACCAACTTGAGAATTCTGAATGTCAATAATTGTACGAGTCTTGTACACATTTCAGAGTTGCCTTGCACTATTCAAAAAATAGATGCAAGAGAATGCTTCAACTTGTCTTGGGAGACAATAAACATTCTATGGGATCAGGTGAAAAAAGAGAGGCATGGATTAGAAATTGTGATGCCTAGAACCAAGGTTCCAGAATGGTTCGATTGTAGTCGTAAAGGAGGAATTCCGTGTTTATGGATTCGTAGGAAGTTTCCCATTAATGTTTATGTGGCATTCATGTTCCAAAAGATGGATGGTGAGAAGGACAGATTCGATGCATATGTTTTTAAACTTTGTTTGGTTATCAACGGTCGATCTGTCCTTcagaaaaaatttaaaccaTTTCGGATTCAAACAAATCATGTTTTAGTTTGTGATCTAAGACGCTTATACAATGACGATGAGTGGTTAAGCATTGATGCATTACTTCTAAATCATGAATGGAATCAAGTTCAAATTTCATATGAAGATATCGGGCGGCACAGTGGCATGACACTAAGTGAATGGGGAGTTTTTGTGTCCAAACAAGGAACTGTTAACTGGGAAGAACATGTTCAATTCATGTGTCCAGATCCAACAAGCCCTTTTATGAGTGAGGTATCTATCATACTTTATGCTGGAACCAGTAGAGTTTGTTTGGGTGTCGTGTTGGATTTCGATTCGTCAGGGGGATTGGAG 6114 0.3618 MNGLRILIVQYTAFSSEPKHLPNHLRLLDWDVYPSKTFPPKFYPRNIIILNLPNSQLTMEEPFKQFSYLILMNFSNNQSITTMPDVSKVQNLRELRLDDCKNLTTVHKSIGFLKHLVHLSASGCTKLENFLQRMFLPSLEVLKLDWCEKLEHFPDIVNEMNKPLKIHMIGTSIKKLPNSVGNLVGLVSIDMECSTKLEYLPSCLFRLPKFVAFDFGSCPKLGASFKRFLPDSPSEGNERSTLKTMRFEESGLSDDDIQAILICFPKLEELFVSKNNLVSLPACIKESTHLTNLDVSDCKKLKEIPQCTNLRILNVDDCTSLAHISELPSTIQKIDARKCFNFSPETSNLLWDQVKKQRHGLEIVMPGIEVPKWFNYICKDGIPCLWVRGKFHNVALALVFQYADGKERIDPDFVQLHLVINGQFVPQKVYYNFIIEPHHVLVCDLQLLFNDDESINLDALHEWNQVQISYEVKNSIVTLSEWGVFLNKQGAVDVTGRWDGYTYGFTYDVFLSFRGKDTQINFIAYLREAFQMRGINAFYDDNNLRIGQDNSPALCKAIEESHISVIVLSEDYASSTWCLDELAKIMECTKRNNKQIAFPIFYHVDPSDVRHQRKSYGEAMVAHQKRFGKESEKIKAWTAALSEVADLKGHHIHTGFEINHVKEIADKVHANIATKPLIDGENPVGLDQRIEEVKSLLDLKPNDDTVCILGIIGLGGIGKTELAKALHNKIVRQFEAVSFLANVREKSNKINGLEDLQKTLLSEMFQQSGTELGSTSKGISELKHKLGRKKVLLVVDDVDERKQLENLAGGSDWFGPGSRIIITTRDKGLLMGTHPIKVEAYEMPKLNDPHSLELFCLNAFGKSHPKTGYEAMSSRAVGYAKGLPLALKVIGSNLATRNSLKDWEHALEDYERIPRKEIQDVLKVSYDVLEPYAQRRWDGYTYGFTYDVFLSFRGKDTQINFIAYLREAFQMRGINAFYDDNNLRIGQDISPALCKAIEESHISVIVLSEDYASSTWCLDELAKIMECTKRNNKQIAFPIFYHVDPSDVRHQRKSYGEAMVAHQKRFGKESEKIKAWTAALSEVADLKGHHIHTGFEINHVKEIADKVHTNIAPKPLIDGENPVGLDQRIEEVKSLLDLKPNDDTVCILGIIGLGGIGKTELAKALYNKIVRQFEAVSFLANVREKSNTINGLKNLQKTLLEWGSTSKGINELKHKLGRKKVLLVLDDVDERKQLENLAGGNDWFGPGSRIIITTRDKSLLMGTYPIEVIKTYAMTELNEQLSLELFCRNAFGKSNPKTGFEAVSSRAVGYAKGLPLALKVIGSNLRTRKSLKAWEDALEDYERIPRKEIQDVLKISYDVLEPSAQSVFLDIACFFKGESIKYVEEILEEFSAASNIEELVNKSLLNVDDGYLNMHDLIQDMGREIVRQEAPNNPAKRSRLWFHQDIIDVLSSNDSGSDAIQGILFDPPGEVDSEGFPRKIKVDWNHIVFEKMHYLRILIVRCITFSSKPKRLPNHLRLLDWKNYPSKTLPPEFYPSKIINLNLRNSELTIKKPFEQFLYLTVMDFSHNSFMKTMPDVSKVENLRELRLDRCDNLTTVHESIGFLKHLVHLSASLCGNLKIFLQKMFLPSLEVLDLNCCEQLEHFPDIVKEMNKPLKIYLRYTSIKKLPNSVGNLIGLVSIYMGHSHKLEYLPSSLFRLPNVVAFQFGGCSKLGESFKRFVPDSPSEANEHSTLKTVYFSWSGLLDEDIHTILICFPNLEELNVSSSDNLVSLPACIEESNHLTNLDVSWCKKLKEIPECTNLRILNVNNCTSLVHISELPCTIQKIDARECFNLSWETINILWDQVKKERHGLEIVMPRTKVPEWFDCSRKGGIPCLWIRRKFPINVYVAFMFQKMDGEKDRFDAYVFKLCLVINGRSVLQKKFKPFRIQTNHVLVCDLRRLYNDDEWLSIDALLLNHEWNQVQISYEDIGRHSGMTLSEWGVFVSKQGTVNWEEHVQFMCPDPTSPFMSEVSIILYAGTSRVCLGVVLDFDSSGGLE 2038
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu05g03753 2038 SUPERFAMILY Toll/Interleukin receptor TIR domain 941 1088 IPR035897 -
Tsu05g03753 2038 PANTHER RESISTANCE PROTEIN (TIR-NBS-LRR CLASS), PUTATIVE-RELATED 514 930 - -
Tsu05g03753 2038 Gene3D Ribonuclease Inhibitor 1657 1842 IPR032675 -
Tsu05g03753 2038 Gene3D Ribonuclease Inhibitor 1481 1656 IPR032675 -
Tsu05g03753 2038 Gene3D Ribonuclease Inhibitor 1 166 IPR032675 -
Tsu05g03753 2038 Gene3D Ribonuclease Inhibitor 167 360 IPR032675 -
Tsu05g03753 2038 ProSiteProfiles TIR domain profile. 505 645 IPR000157 GO:0007165
Tsu05g03753 2038 PANTHER RESISTANCE PROTEIN (TIR-NBS-LRR CLASS), PUTATIVE-RELATED 953 1985 - -
Tsu05g03753 2038 PANTHER RESISTANCE PROTEIN (TIR-NBS-LRR CLASS), PUTATIVE-RELATED 1 483 - -
Tsu05g03753 2038 SUPERFAMILY L domain-like 2 340 - -
Tsu05g03753 2038 Pfam NB-ARC domain 688 930 IPR002182 GO:0043531
Tsu05g03753 2038 Pfam NB-ARC domain 1127 1359 IPR002182 GO:0043531
Tsu05g03753 2038 Gene3D - 1276 1361 IPR042197 -
Tsu05g03753 2038 Gene3D - 845 930 IPR042197 -
Tsu05g03753 2038 SUPERFAMILY Toll/Interleukin receptor TIR domain 502 649 IPR035897 -
Tsu05g03753 2038 ProSiteProfiles TIR domain profile. 944 1084 IPR000157 GO:0007165
Tsu05g03753 2038 Gene3D - 942 1109 IPR035897 -
Tsu05g03753 2038 Gene3D - 503 671 IPR035897 -
Tsu05g03753 2038 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 674 935 IPR027417 -
Tsu05g03753 2038 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN 953 1985 IPR044974 GO:0006952
Tsu05g03753 2038 PRINTS Disease resistance protein signature 1311 1325 - -
Tsu05g03753 2038 PRINTS Disease resistance protein signature 1215 1229 - -
Tsu05g03753 2038 PRINTS Disease resistance protein signature 1147 1162 - -
Tsu05g03753 2038 PRINTS Disease resistance protein signature 1625 1641 - -
Tsu05g03753 2038 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 1114 1371 IPR027417 -
Tsu05g03753 2038 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN 514 930 IPR044974 GO:0006952
Tsu05g03753 2038 SMART till_3 945 1086 IPR000157 GO:0007165
Tsu05g03753 2038 SMART till_3 506 647 IPR000157 GO:0007165
Tsu05g03753 2038 SUPERFAMILY L domain-like 1426 1835 - -
Tsu05g03753 2038 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN 1 483 IPR044974 GO:0006952
Tsu05g03753 2038 Pfam TIR domain 507 667 IPR000157 GO:0007165
Tsu05g03753 2038 Pfam TIR domain 946 1106 IPR000157 GO:0007165
Tsu05g03753 2038 Gene3D - 672 836 IPR027417 -
Tsu05g03753 2038 Gene3D - 1110 1264 IPR027417 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tsu05g03753 Tsu-Chr5 48782813 48827243 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tsu05g03753 507 892 WRKY Transcription Factor Family AT4G12020 27.577 4.98e-30 129
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu05g03753 - - mtr:MTR_5g090940 1351.27