Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu05g03746 atggCTAATGAGAATCATAATCCTTTCTATCAACACAACCACCATGATGATGAACTAAATAACTCAAACTTTTCATTCTCACAAACCTTTCAAGGATTTGATCCTTCTTCTCATAGCACAAGTTTCACTGACTACTTTCATGGTTCTATGGATTATAACACTCTCTCAAAAGCCTTTGATTTGTCTTGTTCATCATCTGAAATGAATATTTCTTCCATTGATGATAACAATACAAAGAAATCTAGTGTAGGAAAAAGTGAGACACTAAATTCTtcagaatcatcatcatctaatGAAGCTGTGATACAAGAAGATTCAACCAAAAGTAACAAGAAAGATAAGCAACCAAAATTAGGGTGTGAAGATGGAGATGATGAAAAGGCTAAGAAAGATAAAGAGAATAAGactaaaaagaaagagaaaaagccAAAAGAGCCAAGATTTGCCTTCTTGACTAAAAGTGAGATTGATCATCTTGAAGATGGATATAGATGGAGAAAATATGGACAAAAAGcagtcaagaatagtccatacccAAGGAGCTATTATAGATGTACAAGTCAAAAGTGCATTGTGAAGAAAAGAGTGGAAAGATCATACCAAGATCCAACAATTGTGATGACAACATATGAAGGACAACACAACCACCATTGTCCAGCAACACTAAGAGGTAATGCTACCTCCATGTTGTTTTCATCACCATCACTCTTTGCTCCAACTTCAATGGGATTGGAACAAAGATTGCACCAAGATTTTCTTGCTCAATTTCTTCCAAGTTACACCCAACAAAGTaacattcaacaacaaatgttCCACCAAAATATTCCACAAATATtacctcatcatcaacaacaacagcagcagcaacagCAACAGTTTCAACTTCATGATGACTATGGTTTGTTGCAAGATCTACTTCCATCATCATTTCCAAGAAAACAAGAGCCATGA 951 0.3049 MANENHNPFYQHNHHDDELNNSNFSFSQTFQGFDPSSHSTSFTDYFHGSMDYNTLSKAFDLSCSSSEMNISSIDDNNTKKSSVGKSETLNSSESSSSNEAVIQEDSTKSNKKDKQPKLGCEDGDDEKAKKDKENKTKKKEKKPKEPRFAFLTKSEIDHLEDGYRWRKYGQKAVKNSPYPRSYYRCTSQKCIVKKRVERSYQDPTIVMTTYEGQHNHHCPATLRGNATSMLFSSPSLFAPTSMGLEQRLHQDFLAQFLPSYTQQSNIQQQMFHQNIPQILPHHQQQQQQQQQQFQLHDDYGLLQDLLPSSFPRKQEP 316
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu05g03746 316 PANTHER WRKY TRANSCRIPTION FACTOR PROTEIN 1-RELATED 21 309 IPR044810 GO:0003700
Tsu05g03746 316 MobiDBLite consensus disorder prediction 70 149 - -
Tsu05g03746 316 SMART WRKY_cls 159 218 IPR003657 GO:0003700|GO:0006355|GO:0043565
Tsu05g03746 316 ProSiteProfiles WRKY domain profile. 154 219 IPR003657 GO:0003700|GO:0006355|GO:0043565
Tsu05g03746 316 SUPERFAMILY WRKY DNA-binding domain 152 219 IPR036576 GO:0003700|GO:0006355|GO:0043565
Tsu05g03746 316 MobiDBLite consensus disorder prediction 70 104 - -
Tsu05g03746 316 Gene3D WRKY domain 144 220 IPR036576 GO:0003700|GO:0006355|GO:0043565
Tsu05g03746 316 MobiDBLite consensus disorder prediction 105 149 - -
Tsu05g03746 316 Pfam WRKY DNA -binding domain 160 216 IPR003657 GO:0003700|GO:0006355|GO:0043565
Tsu05g03746 316 MobiDBLite consensus disorder prediction 1 23 - -
Tsu05g03746 316 PANTHER WRKY TRANSCRIPTION FACTOR 71-RELATED 21 309 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tsu05g03746 Tsu-Chr5 48694596 48696968 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tsu05g03746 32 316 WRKY Transcription Factor Family AT4G18170 44.595 8.92e-58 187
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF WRKY Tsu05g03746 WRKY 1e-24 CL0274
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tsu05g03746 05 48694596 48696968 Tsu05g03746 05 48694596 48696968 ECH