Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu05g03745 ATGTCATCCAAGAACTCTTTGGATGCAAAATTGTCAAAGACGTCCTTTTTGGGTTTGAAAAGATGGGTTTTGATTGGGATAGGTTTTGGTGCATTTATAGTGGTGTTTCTTTGTATATTGTATATTTGGGTGCTGTTTCGGAGGAAGTCTAGGGGTAGGAGATCTCTGGACAAATCCCAAATACCGAATGTGTCAAAAGATATCAATGTTGACAAGGTTGCGGTGCAGAATTCTCATGTTCAACATGGAAATACGTTTGTTCCCGATGATAATAATTCAGACAAGATATCGATTCATATGAGGGCAAGCAAACTCAGTGATCCGGATAGTGCAAGTCATTGCAGTTCAGTTTATCATCACGAGAGAGGATTAAGTGCGCTTTCATGGGAAGAAGGGAGCTCTGGGAATTATAAGAAGCAGTCTACATTGTCATATGGAGGAGGGCCAATGTCTTCTCCCTCTCCTTTGATTGGTTTGCCGGAATTTTCTCATCTTGGTTGGGGCCACTGGTTTACACTTAGAGATCTTGAACAAGCAACCAATTGTTTCTCGACTGAGAACGTTCTCGGTGAGGGTGGATATGGAGTTGTTTACAAGGGAAGACTGATAAACGGAACTGAGGTTGCAGTGAAGAAACTTCTTAACAACTTGGGACAAGCAGAGAGAGAATTCAGGGTTGAAGTGGAGGCTATAGGCCATGTTAGACATAAGCATCTTGTGCGCCTGCTTGGATATTGCGTAGAAGGAGTTCACAGGCTGCTGGTGTACGAATATGTGAACAATGGTAACTTAGAACAATGGTTACATGGCGGCAAGTACAAACTTGGGACACTTACCTGGGAGGCCCGCATGAAAGTTATACTTGGCACAGCCAAAGCGCTTGCTTACTTACATGAAGCGATTGAGCCAAAAGTTATTCACCGGGATATAAAGTCTAGCAACATATTGATTGATACCGAGTTCAATGCAAAAGTTTCCGATTTTGGTTTGGCCAAACTCTTGGAATCAGGAGAAAGTTACATAACTACTAGAGTAATGGGAACGTTTGGTTACGTAGCACCGGAATATGCAAACAGTGGTTTGTTAAATGAGAAGAGTGATATTTACAGCTTCGGTGTTCTCCTGCTGGAAGCAGTTACTGGCAGGGACCCTGTAGACTATGCGCGTCCTTCTAACGAGGTTAATCTTGTTGAATGGCTCAAGATGATGGTGGGGGCAAGGAGATCCGAGGAAGTTGTGGACTCTAGCATTGAAGTTAAACCATCTGGACGTGCTTTAAAACGTTCCCTTCTGGTTGCACTTAGGTGTATTGATCCCGATGCTGACAAGAGGCCTAAAATGAGTCAAGTTGTTAGGATGCTTGAAGCCGATGAATATCCATTTCGAGAGGATCGAAGGAATAGAAAGAGCACGACTACCAGCTTCGAAATTGAAACGGTCAAGGAAATTTCTGATCAAGCTGATGTTGAAAAGGCGGAGCATGTGTCAGAAACAACTCAAGGAAAGGATTGA 1512 0.4312 MSSKNSLDAKLSKTSFLGLKRWVLIGIGFGAFIVVFLCILYIWVLFRRKSRGRRSLDKSQIPNVSKDINVDKVAVQNSHVQHGNTFVPDDNNSDKISIHMRASKLSDPDSASHCSSVYHHERGLSALSWEEGSSGNYKKQSTLSYGGGPMSSPSPLIGLPEFSHLGWGHWFTLRDLEQATNCFSTENVLGEGGYGVVYKGRLINGTEVAVKKLLNNLGQAEREFRVEVEAIGHVRHKHLVRLLGYCVEGVHRLLVYEYVNNGNLEQWLHGGKYKLGTLTWEARMKVILGTAKALAYLHEAIEPKVIHRDIKSSNILIDTEFNAKVSDFGLAKLLESGESYITTRVMGTFGYVAPEYANSGLLNEKSDIYSFGVLLLEAVTGRDPVDYARPSNEVNLVEWLKMMVGARRSEEVVDSSIEVKPSGRALKRSLLVALRCIDPDADKRPKMSQVVRMLEADEYPFREDRRNRKSTTTSFEIETVKEISDQADVEKAEHVSETTQGKD 503
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu05g03745 503 CDD STKc_IRAK 189 455 - -
Tsu05g03745 503 ProSitePatterns Serine/Threonine protein kinases active-site signature. 305 317 IPR008271 GO:0004672|GO:0006468
Tsu05g03745 503 ProSitePatterns Protein kinases ATP-binding region signature. 189 212 IPR017441 GO:0005524
Tsu05g03745 503 Gene3D Transferase(Phosphotransferase) domain 1 259 473 - -
Tsu05g03745 503 MobiDBLite consensus disorder prediction 461 481 - -
Tsu05g03745 503 PANTHER RECEPTOR-LIKE KINASE PLANT 2 496 - -
Tsu05g03745 503 SUPERFAMILY Protein kinase-like (PK-like) 163 456 IPR011009 -
Tsu05g03745 503 PANTHER OS01G0323000 PROTEIN 2 496 - -
Tsu05g03745 503 SMART serkin_6 183 454 IPR000719 GO:0004672|GO:0005524|GO:0006468
Tsu05g03745 503 ProSiteProfiles Protein kinase domain profile. 183 462 IPR000719 GO:0004672|GO:0005524|GO:0006468
Tsu05g03745 503 Gene3D Phosphorylase Kinase; domain 1 165 258 - -
Tsu05g03745 503 Coils Coil 203 223 - -
Tsu05g03745 503 Pfam Protein kinase domain 184 452 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tsu05g03745 Tsu-Chr5 48686137 48688775 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tsu05g03745 160 457 Trihelix Transcription Factor Family AT1G70460 49.505 5.29e-92 293
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_RLCK-V Tsu05g03745 Pkinase 1.4e-47 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu05g03745 - - gmx:100778444 799.275
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tsu05g03745 05 48686137 48688775 Tsu05g03745 05 48686137 48688775 ECH
Tsu03g01440 03 14005092 14008692 Tsu05g03745 05 48686137 48688775 PCT