Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu05g03717 ATGGCAAATTATGAAGAACAGTCTGATGGTTTCAACTATGATGTTTTCCTCAGTTTTAGAGGAGAAGACACACGACACGGTATTGTTGGATATCTTCTTGACGCATTCGAGAACAGGAGAATCAATGTTTTCTTTGATGATAAAAGTCTGACAATAGGGGAAGAATTGTCACCTGCATTTAATAAAGCCATAGAAGAATCTAATATCTCAGTTATTGTTTTTTCTGAGAATTATGCATCTTCCAGGTGGTGCCTTAATGAACTCGCGAAGATCATGGAATGTAcgaaaagaaacaagaaacaaaTTGCTTTTCCAATATTTTACCATGTTGATCCATCGGATGTACGACATCAAAGAAAGAGCTATGGAGAAGCCATGGTTGCTCATCAGAATAAGTTTGGAAAAGagtcagaaaaaataaaagcatgGAAAGCAGCATTGTCTGAAGTGGCAGACTTGAAAGGTCACCACATCCACACTGGGTTCGAAATCAATCATGTTAAAGAGATTGCCAATAAGGTCCACACTAATATAGCACCTAAACCTTTAATTGATGGTGAGAATCCAATTGGACTTGATCAACGCATAGAAGAGGTGAAGTCACTTCTAGACCTGAAGGCAAATGACAACACTGTATGCATATTAGGCATAATTGGACTTGGCGGAATAGGAAAAACTAAACTTGCCAAAGCATTGTATAACAAGATTGTGCGCCAATTTGAAGCTGTAAGTTTTCTTGCCAATGTTAGagagaaatcaaacaaaatcaatgGCCTAGAAGATCTGCAGAAGACccttttatcggagatgtttcAGCAGTCAGGAACCGAGTTGGGAAGTACAAGTAAAGGAATCTCCGAATTAAAACACAAGCTTGGAAGGAAAAAGGTTCTTTTGGTACTTGACGATGTTGATAAGATAAGACAATTAGAAAACTTGGCAGGAGGAAGCGATTGGTTTGGTCCAGGTAGTAGGATCATTATAACTACAAGGGACCAAGGTTTACTCATGGGCACTTATCCAATAGAAGTAATTAAGACTTATGCAATGACTGAACTTAATGAACAACTTTCTCTTGAGTTGTTTTGTCAAAATGCCTTTGGAAAAAGCCATCCTAAAACAGAATATGAAGCTATTTCATCTCGCGCGGTTGGTTATGCGAAAGATATAGCTTGCTTCTTCAAAGGAGAAATCATAGAATATGTTGAAGAAGTACTTGATGAATTCAGTGCAGCATCAAATATTGAAGAGCTTGTTAATAAATCTCTCTTGAATGTTGATGATGGATATTTGAATATGCATGACCTAATACAGGATATGGGTAGAGAGATTGTTAGGCAAGAGGCACCAAATAATCCTGCAAAACGCAGCAGATTATGGTTTCATCAAGATATCATTGATGTATTATCCTCCAATGATTCTgGGAGTGATGCAATTCAAGGGATAATGTTTGATCCTCCAGAACATATAAGAGAATTAGATTCGAATCATATTGCTTTTGAGAAGATGCACCATCTTAAAATTCTCATTGTTCGAGGATCAACTTTTTCATCCAAGCCTAAACATCTTCCAAATGATTTGAGGCTACTTGACTGGAAGGAATACCCTTCAAAGACTCTCCCACCAGAATTTTATCCGACGAAAATCATCAACTTAAATTTGCGTAATAGTCAACTTACAATCAAAAAACCATTTGAGCAATTTTTATGTCTAACTGTAATGGATTTCTCATATAGTAAATCTATGAAAACAATGCCTGATGTGTCCAAAGTTGAAAATTTGAGGGAATTGCGACTTGATCATTGTGATAACTTAACTACGGTTCATGAATCCATTGGATTTCTCAAACATCTTGTCTACTTAAGGGTTTCGGActgcagaaaacttaaaatctTTCTGCAAAAAATGTTTTTACCATCTCTAGAAGTCCTTGACCTTGATCGGTGTTACAAACTTGAACACTTCCCAAATATAGGGAACGAGATGAATAAACCATTGAAGATTCAAATGAAGGGTACCTCTATTAAGAAGCTGCCAAATTCTGTTGGTAATCTCATTGGACTTGTTTCAATTGACATGGAACATAGCCAAAAACTAGAATATCTACCAAGTAGCTTATTCAGGTTACCAAATGTTGTTGCTTTTAAATTTGGAGGATGTTCTAATCTTGGTAAATCTTTCAAAAGATTTCTACATGATGGCCCTTCAAAAGCCAAGGAACATTCAACATTAAAAACAGTGTATTTTTCATGTCATGGATTGTTAGATGAAGATATTCAGACAATTCTCATATGTTTTCCAAAATTAGAAGAATTGGATGTATCATTTAGTGACAATTTGGTCTCTCTCCCAGCTTGCATTAAAGAGTCTAATCACTTGACAGAGCTTCATGTTAGTTGTTGCGATAAGCTTAAAGAAATTCCCCAATGCACCAACTTGAGAATTCTGAATGTCAGTGATTGTACGAGTCTTGCACACATTTCAGAGTTGCCATGCACTATTCAAAGAATAAATGCAATTGGATGCTTCAACTTGTCTTGGGAGACAAGAAACATGCTGTGGGATCAGGTGACAAAAGAGAGGCATGGATTAGAAATTGAGATGTCTAATATCAAGGTACCAGAATGGTTCGATTGTAGTCGCAAAGGAGGAATTCCGTGTTTATGGATTCGTAGGAAGTTTCCCATTAATGTTTGTGTGGCATTGATGTTCCAAGAGATCAATGATGATATACATCTTGTTAAACTTTATTTGGTTATCAACGGTCAATCTGCCCGTCCCGAAAAATATAATCCATTCTTCTGTATTCAAACAAATCATGTTTTAGTTTGTGATCTAAGACACTTATACAATGATGATGAGTGGATAAGCATTGATGCATTACTTCTTAAGCATGAATGGAATCAAGTTCAAATTTCATGTGAAGATGTCTCGGACAGCAGTACCTTGACACTAAGTGAATGGGGAGTTTTTGTGTACAAACAAGGAACTGTTAACTGGGAAGAACATGTCCAATTCATGTGTCCTGATCCAACCAGGTACTCAAACCTCTGTAATGAAACAGACAAACCTCTGTAA 3078 0.3554 MANYEEQSDGFNYDVFLSFRGEDTRHGIVGYLLDAFENRRINVFFDDKSLTIGEELSPAFNKAIEESNISVIVFSENYASSRWCLNELAKIMECTKRNKKQIAFPIFYHVDPSDVRHQRKSYGEAMVAHQNKFGKESEKIKAWKAALSEVADLKGHHIHTGFEINHVKEIANKVHTNIAPKPLIDGENPIGLDQRIEEVKSLLDLKANDNTVCILGIIGLGGIGKTKLAKALYNKIVRQFEAVSFLANVREKSNKINGLEDLQKTLLSEMFQQSGTELGSTSKGISELKHKLGRKKVLLVLDDVDKIRQLENLAGGSDWFGPGSRIIITTRDQGLLMGTYPIEVIKTYAMTELNEQLSLELFCQNAFGKSHPKTEYEAISSRAVGYAKDIACFFKGEIIEYVEEVLDEFSAASNIEELVNKSLLNVDDGYLNMHDLIQDMGREIVRQEAPNNPAKRSRLWFHQDIIDVLSSNDSGSDAIQGIMFDPPEHIRELDSNHIAFEKMHHLKILIVRGSTFSSKPKHLPNDLRLLDWKEYPSKTLPPEFYPTKIINLNLRNSQLTIKKPFEQFLCLTVMDFSYSKSMKTMPDVSKVENLRELRLDHCDNLTTVHESIGFLKHLVYLRVSDCRKLKIFLQKMFLPSLEVLDLDRCYKLEHFPNIGNEMNKPLKIQMKGTSIKKLPNSVGNLIGLVSIDMEHSQKLEYLPSSLFRLPNVVAFKFGGCSNLGKSFKRFLHDGPSKAKEHSTLKTVYFSCHGLLDEDIQTILICFPKLEELDVSFSDNLVSLPACIKESNHLTELHVSCCDKLKEIPQCTNLRILNVSDCTSLAHISELPCTIQRINAIGCFNLSWETRNMLWDQVTKERHGLEIEMSNIKVPEWFDCSRKGGIPCLWIRRKFPINVCVALMFQEINDDIHLVKLYLVINGQSARPEKYNPFFCIQTNHVLVCDLRHLYNDDEWISIDALLLKHEWNQVQISCEDVSDSSTLTLSEWGVFVYKQGTVNWEEHVQFMCPDPTRYSNLCNETDKPL 1025
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu05g03717 1025 Gene3D - 11 176 IPR035897 -
Tsu05g03717 1025 Pfam NB-ARC domain 194 375 IPR002182 GO:0043531
Tsu05g03717 1025 Gene3D - 177 340 IPR027417 -
Tsu05g03717 1025 Gene3D Ribonuclease Inhibitor 665 853 IPR032675 -
Tsu05g03717 1025 SUPERFAMILY L domain-like 445 845 - -
Tsu05g03717 1025 Gene3D Ribonuclease Inhibitor 463 664 IPR032675 -
Tsu05g03717 1025 PANTHER RESISTANCE PROTEIN (TIR-NBS-LRR CLASS), PUTATIVE-RELATED 24 381 - -
Tsu05g03717 1025 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN 24 381 IPR044974 GO:0006952
Tsu05g03717 1025 SMART till_3 12 153 IPR000157 GO:0007165
Tsu05g03717 1025 ProSiteProfiles TIR domain profile. 11 178 IPR000157 GO:0007165
Tsu05g03717 1025 PRINTS Disease resistance protein signature 636 652 - -
Tsu05g03717 1025 PRINTS Disease resistance protein signature 291 305 - -
Tsu05g03717 1025 PRINTS Disease resistance protein signature 214 229 - -
Tsu05g03717 1025 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN 389 993 IPR044974 GO:0006952
Tsu05g03717 1025 PANTHER RESISTANCE PROTEIN (TIR-NBS-LRR CLASS), PUTATIVE-RELATED 389 993 - -
Tsu05g03717 1025 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 181 389 IPR027417 -
Tsu05g03717 1025 SUPERFAMILY Toll/Interleukin receptor TIR domain 5 155 IPR035897 -
Tsu05g03717 1025 Pfam TIR domain 12 174 IPR000157 GO:0007165
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tsu05g03717 Tsu-Chr5 48486818 48492173 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tsu05g03717 4 805 WRKY Transcription Factor Family AT4G12020 29.076 1.99e-77 277
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu05g03717 - - var:108338187 818.92