Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu05g03714 ATGGCAAATTCTGAAGAACAGTCAGATCGTTTCACCTATGATGTTTTCCTCAGTTTTAGAGGAGAGACACGGTACAGTTTTGTTGGATATCTTCGCGAAGAGTTTCGAAAGAGGGGAATCAATGCTTTCTATGATGATGAAAATCTGAGAATAGGGGAAGATTTGTCACCAGCATTTTGTAGAGCCATAGAAAAATCTAATATCTCAGTTATTGTTTTATCTGAGAATTATGCATCTTCTAGGTGGTGCCTTGATGAACTTGTGAAGATCATGGAATGTAcgaaaagaaacaagaaacaaaTTGCTTTTCCAATATTTTACCATGTTGATCCATCAGATGTACGAAAACAAAGAAACAGCTATGGCAAAGCCATGGTTGCTCATCAGAAGAGGTTTGGAAAAGACTCTGAGAAAATAAAAGCATGGACAGCAGCATTGTCTAAAGTGGCAGACTTGAAAGGTCAACACCACCATATCCACAATGGGCACGAAATCGATCATGTCAAAGAGATTGCTGAAAAGGTCCACGCTAATATAGCTCCTAAACCTTTACTTTTTGGTGAGAATCCAGTTGGACTTGATCAACACATAGAAAACGTGAAGTCACTTCTAGATTTGAAGCCAAATGACGACACTGTATGCATGTTGGGCATAATTGGACTTGGTGGAATAGGGAAAACTGAACTTGCCAAAGCAATGTATAATAAGATTGTGCACCAATTTGAAGCTGCAAGTTTTCTTGCCAATGTTAGAGAGAAATCGAAAAAAATCAATGGCCCAGAAGATCTGCAAAATACccttttatcggagatgtttcAGCAGCCAGAAACCAAGTTAGGAAGTACAACTAAAGGAATCTACGAAATAAAACACAAGATTGGAAGGAAAAAGGTTCTTTTGGtacttgatgatgttgaaaagatgAAACAATTAGAAAACTTGGCAGGAGGAAGTGATTGGTTTGGTCCAGGTAGTAGGATCATTTTAACTACAAGAGACAAAGGTTTGCTCATGGGTACTCTTCCAATAAAACTTAAGACTTATGAAATGACTGCCCTTAATGATCAACTTTCTCTTGAGTTGTTTTGTCGAAATGCCTTTGGAAGAAGCCATCCTAAAACAGAATATGAAGCTATTTCATCTCGTGCGGTTGGTTATGGGAAAGGTCTTCCGTTGGCTTTAAAAGTTATAGGCTCCAATTTGCGTactagaaaaagtttaaaagcTTGGGAGTCTGCATTGAAAGATTATGAGAGAATTCCCTGTACAGATATCCAAGATGTGCTTAAAGTAAGCTATGATGGGTTGGAGCCTAATGCTCAAAGTGTTTTCCTAGATATAGCTTGCTTCTTCAAAGGGGAAAGCGTAGAATATGTTGAAGAAGTACTTGGTGAATTCAGTGCAGCATCAAATATTGAAGAGCTTGTTAATAGATCTCTCTTGAATGTTGATGATGGATACTTGAATATGCATGATCTAATACAGGATATGGGTAGAGAGATTGTTAGGCAAGAGGCACCAAATAATCCTGCAAAACGTAGTAGATTATGGCTTCAACAAGATGTTATTGATGTATTATCGGCCAATGATTCGggGAGTGATGCAATTCAAGGGATAATGCTTGAACCTCCTCCGGGGACAATAGaagtaaattattatttttcaacagAACAATATTGGAATCCAACAGTTGTATATTGGAATGATTATGCTTTTGAGAAGATGAATCGTCTCAGAATTCTCATTTTTCGacatataaatttttcattagAGCCTAAACATCTGCCAAACCATTTAAGGCTACTTGACTGGGAGTTATACCCTTCAAAGACTTTACCACCAACATTTTATCCGAGGAATGTGATCAtcttaaatttgtcttttagtCGATTTACAATGGATGAGCCATTTgagCAATTTTCATATCTGACTGTCATGAATTTCTCATATAATAAATCTATCAAAAAAATGCCTGATGTGTCTAAAGTTGAAAATTTGAGAGAATTGCGACTTAATTTTTGTGAGAACTTAACTACGGTTCATGAATCCATTGGATTTCTCAAACATCTTGTCCACTTAAGCGTTTTGAATTGCATCAAACTTAAAAACTTTCCGCAAAGTATGTTTTTACCATCTCTAGAATTCCTTAGACTTGATCATTGTACACAACTTAAACACTTTCCAGATATAGTGAACAAGATGAATAAACCATTGGAGATTCTTATGAGGGATACCTCTATTAAGAAGCTGCCAAATTCCGTTGGTAATCTTATTGGACTTGTTTCAATGAACATGCATGGTTGCATGAAACTAAAATATCTACCAAGTAGCTTATTCAGGTTACCAAATGTTGTTACTTTTGAATTTGGATATTGTTCTAAACTTGGTGAATCGTTCAGAAGATTTCTACCTGATAGCCCTTCAGAAGTCAATGAACGTTCAACATTAAAAACAATGCATTTTGGAAATAGTGGTTTGTCAGATGAAGATATTCAAGCAATTCTCATATGTTTTCCAAAATTAGAAGAATTGAATGTATCATTTAGTTACAATTTGGTCTCTCTGCCAGCGTGCATTAAAGAGTCTACTCACTTGACAAATCTTGATGTTAGTTATTGCAATAAGCTTCAAAAAATTCCTGAATGCACCAACGTGAAAATCCTGAATGTCCGAGGTTGTAGCAGTCTTACACACATTTCAGAGTTGCCATGCACTATTAAATACATAAATGCTTCAAAATGCTTCAACATTTCTTTGGAGACATCAGACATGCTATGGGATCAGGTGAAAAAAGAGAGGCATGCATTAGTAATTGTGATGCCTGAAATCAACGTTCCAAAATGGTTTGATTATAGATGTAAAAGAGGAATTCCGTGTTTATGGGTTCGTGGGAAGTTTCCCATTAATGTTGCTTTAGCATGGGAGTTCCAATTAAAAGATGGGGCAGAAAGAATACATGGGAATCCGTATGGATGGCCTGAACTTCATTTGGTTATCAATGGTCAACGTGTCCCGCGCAAAGGCTATTACCACTTCCACATTGCACTGGGTCATGTTTTAGTTCATGACCTACGATTCTTATTGAATGAGGAGGACTGGCTAAGCATTGATGCATTACTTCTTGAGCATGAATGGAATCAAGTGCAAATTTCATATGAATTCATTAGAGACCTCATCACACTACGTGAATGGGGAGTTTTTGTGTACAAACAAGGAACTGTTAATTGGGAAGAATATGTTCAATTTACATGTCCTACAAAGGATCCAATTATGACAATAGAGGATTTCAAACATGAGGATTCCAATGATGCTGCTGTTAATGAAAATCGTGATGATCAAATAATTGGCATTGAAGATATTCCTAGTCCTAATACTCCTAAAGTTGATGTAACTCAGGACACTCCTTACTCCTCTGGTTTCTTCAGGAGGCTTTTGTACACTTGTTTTTCTAAGTGTTTCTCTTAG 3465 0.3547 MANSEEQSDRFTYDVFLSFRGETRYSFVGYLREEFRKRGINAFYDDENLRIGEDLSPAFCRAIEKSNISVIVLSENYASSRWCLDELVKIMECTKRNKKQIAFPIFYHVDPSDVRKQRNSYGKAMVAHQKRFGKDSEKIKAWTAALSKVADLKGQHHHIHNGHEIDHVKEIAEKVHANIAPKPLLFGENPVGLDQHIENVKSLLDLKPNDDTVCMLGIIGLGGIGKTELAKAMYNKIVHQFEAASFLANVREKSKKINGPEDLQNTLLSEMFQQPETKLGSTTKGIYEIKHKIGRKKVLLVLDDVEKMKQLENLAGGSDWFGPGSRIILTTRDKGLLMGTLPIKLKTYEMTALNDQLSLELFCRNAFGRSHPKTEYEAISSRAVGYGKGLPLALKVIGSNLRTRKSLKAWESALKDYERIPCTDIQDVLKVSYDGLEPNAQSVFLDIACFFKGESVEYVEEVLGEFSAASNIEELVNRSLLNVDDGYLNMHDLIQDMGREIVRQEAPNNPAKRSRLWLQQDVIDVLSANDSGSDAIQGIMLEPPPGTIEVNYYFSTEQYWNPTVVYWNDYAFEKMNRLRILIFRHINFSLEPKHLPNHLRLLDWELYPSKTLPPTFYPRNVIILNLSFSRFTMDEPFEQFSYLTVMNFSYNKSIKKMPDVSKVENLRELRLNFCENLTTVHESIGFLKHLVHLSVLNCIKLKNFPQSMFLPSLEFLRLDHCTQLKHFPDIVNKMNKPLEILMRDTSIKKLPNSVGNLIGLVSMNMHGCMKLKYLPSSLFRLPNVVTFEFGYCSKLGESFRRFLPDSPSEVNERSTLKTMHFGNSGLSDEDIQAILICFPKLEELNVSFSYNLVSLPACIKESTHLTNLDVSYCNKLQKIPECTNVKILNVRGCSSLTHISELPCTIKYINASKCFNISLETSDMLWDQVKKERHALVIVMPEINVPKWFDYRCKRGIPCLWVRGKFPINVALAWEFQLKDGAERIHGNPYGWPELHLVINGQRVPRKGYYHFHIALGHVLVHDLRFLLNEEDWLSIDALLLEHEWNQVQISYEFIRDLITLREWGVFVYKQGTVNWEEYVQFTCPTKDPIMTIEDFKHEDSNDAAVNENRDDQIIGIEDIPSPNTPKVDVTQDTPYSSGFFRRLLYTCFSKCFS 1154
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu05g03714 1154 SUPERFAMILY L domain-like 490 906 - -
Tsu05g03714 1154 PRINTS Disease resistance protein signature 708 724 - -
Tsu05g03714 1154 PRINTS Disease resistance protein signature 387 401 - -
Tsu05g03714 1154 PRINTS Disease resistance protein signature 292 306 - -
Tsu05g03714 1154 PRINTS Disease resistance protein signature 215 230 - -
Tsu05g03714 1154 Pfam TIR domain 13 175 IPR000157 GO:0007165
Tsu05g03714 1154 Pfam NB-ARC domain 194 423 IPR002182 GO:0043531
Tsu05g03714 1154 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN 8 879 IPR044974 GO:0006952
Tsu05g03714 1154 SMART till_3 12 152 IPR000157 GO:0007165
Tsu05g03714 1154 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 184 447 IPR027417 -
Tsu05g03714 1154 Gene3D Ribonuclease Inhibitor 568 739 IPR032675 -
Tsu05g03714 1154 Gene3D Ribonuclease Inhibitor 740 935 IPR032675 -
Tsu05g03714 1154 PANTHER RESISTANCE PROTEIN (TIR-NBS-LRR CLASS), PUTATIVE-RELATED 8 879 - -
Tsu05g03714 1154 Gene3D - 177 340 IPR027417 -
Tsu05g03714 1154 Gene3D - 352 437 IPR042197 -
Tsu05g03714 1154 SUPERFAMILY Toll/Interleukin receptor TIR domain 4 154 IPR035897 -
Tsu05g03714 1154 Gene3D - 6 176 IPR035897 -
Tsu05g03714 1154 ProSiteProfiles TIR domain profile. 11 150 IPR000157 GO:0007165
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tsu05g03714 Tsu-Chr5 48415760 48421402 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tsu05g03714 13 806 WRKY Transcription Factor Family AT4G12020 30.900 2.15e-80 288
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu05g03714 - - mtr:MTR_5g090940 1368.99