Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu05g03713 ATGGCAAATTATGAAGAGCAGTCGGATTGTTTCACCTATGACGTTTTCCTCAGTTTTAGAGGGGAAGACACGCGGAACAGTTTTATCGGATATCTTCGTGAAGAGTTTCGAAAAAGGAGAATCAATGCTTTCTATGATGATAAAAATCTTAGAATAGGGGAAGACATGTCACCTGCATTTTTTAAAGCCATAGAAGAATCTAATATCTCAGTTATTGTTTTATCTAAGGATTATGCATCTTCTACGTGGTGTCTTGATGAACTAGTGAAGATCATGGAATGTACGgaaagaaacaagaaacaaaTTGCTTTTCCAATATTTTACCATGTTGATCCATCTGATGTACGAAAACAAAGAAACAGCTATGGCAAAGCCATGGTTGCTCATCAGAAGAGGTTTGGAAAAAACACGGAGAAAATAAAAGCATGGACAGCAGCATTGTCTAAAGTGCCAAACTTGAAAGGTCACCACCACCATATCCACAATGGGCATGAAATCGATCATGTCAAAGAGATTGCTGAAAAGGTCCACGCTAATATAGCTCCTAAACATTTACTTGTTGGTGAGAATCCAGTTGGACTTAATCAACACATAGAAAAGGTGAAGTCACTTCTAGACTTGAAGCCAAATGACGATACTATGTGCATGTTGGGCATAATTGGACTTGGCGGAATAGGGAAAACCGAACTTGCCAAAGCAATGTATAACAAGATTGTGCACCAATTTGAAGCTGCAAGTTTTCTTGCCAATGTTAGagagaaatcaaacaaaatcaatgGCCTAGAAGATCTGCAGAAGACccttttatcggagatgtttcAGCAGCCAGAAACCGAGTTTGGAAGTACAAGTAAAGGAATCTACGAAATAAAACACAAGCTTGAAAGGAAAAAGGATATGGGTAGAGAGATTGTTAGGCAAGAGGCACCAAATAATCCTGCAAAACGTAGTAGATTATGGTTTCATCAAGATGTCATTGATGTATTATCAGCCAACGATTCAGGGAGTGATGCAATTCAAGGGATAATGCTTGAACCTCCAGATTATATGACAGAAGTATATTTGAATGATTCTTCTTTTGAGAAGATGAGCCGTCTCAGAATTCTCACTGTTCGATTTACAACTTTTTCATCCGAGCCTAAACATCTTCCAAATCATTTAAGGCTACTTGACTGGGAGAAATACCCTTCAAAGACTCTCCCACCAAAATTTTACCCGAGGAATATAATCATCTTAAATTTGCGTAATAGtcaatttacaataaaaaaaccaTTTCAGCAATTTTCATATCTGACTGTCATGGATTTCTCATATAGTAAATCTATCAAAAGAATGCCTGATGTGTCCAAAGTTGAAAATTTGAGAGAATTGAAACTTGATTGTTGTGAGAACTTAACTACCCTTCATGAATCCATTGGATTTCTCAAACATCTTGTCCACTTAAGCGCATCGAGATGCACCAATCTTAACCACTTTCTGCAAAGAATGTTTTTACCATCTCTAGAAGTCCTTGACCTTAAATATTGTGTAAATCTTGAACACTTCCCAGATATAGTGAACAAGATGAATAAGCCATTGGAGATTCGTATGAGTCATACCTCTATTAAGAAGCTGCCAGATTCCATTGGTAATCTTATTGGACTTGTTTCAATAAACATGTATGGTTGCATGAAACTCAAATATCTACCAATTAGCTTATTCAGGTTACCAAATGTTGTTGGTTTTAACTTTAAAGGATGTACTAAACTTGGTGAATCTTTGAGAAGATTTCTACATGATAGCCCTTCAGAAGCCAATGGACATTCAACATTAAAAACAATGTATTTTTCATGTAGTGGTTTGTCAGATGAAGATATTCTTACAATTCTCATATGGTTTccaaaattagaaaaattgagTGTATCATTTAGTTACAATTTGGTCTCTCTCCCAGCTTGCATTAAAGAGTTTAATCACTTGACATATCTCGATGTCAGTCATTGCAAAAAGCTTAAAGAAATTCCCCACTGCACCAACTTGAGAATTCTGAAGGTCGAGCATTGTACGAGTCTTGCACACATTTCAGAGTTGCCATGCACTATTCAAACAATAGATGCAAGAAAATGCCTCGAGTTTTCTTCGGAGACATCTGACATGCTATGGGATCAAGTGAAAAAAGAGAGGCATGGATTAGAAATTGTGATGTCTAGATACTACAAGGTACCAAAATGGTTCGATTATAGTCGCAAAGGAGGAATTCCGTGTTTATGGGTTCGTGAGAAGTTTCCCATTAGTAATTGTGCTTTTGCATTGGTGTTCCAAGCTGCTCCAGATGGGATTTACAGGCTGGATTTTGTTCAACTTCATTTGGTTATCAACGGTCAATCTGTCTCTCACAAAGTCGGCTATTTCTCTGTTATTGAACCAGATCATGTTTTAGTTTGTGATCTACGACTCTTCTACAATGACGAGGAATGGCTAAGCATTGATGCATTACTTCTTAAGCATGAATGGAATCAAGTACAAATTTCATATGAATATGACAGAATTAGCGTGACACTAAGATCCAATTATGACGATAGAGGATTTTTCAAACATGACGATTCCAATGATGCCGCTGATAATGAAAATTGCGATGATATAACAATTGGCATAGACGATATTCCTAATCCTACTAATCAAGAAGTTGATGAAACTCAGGACACTCCTTACCCCTCTGAAGTCAATAACGCGCGATCCCGGTGGGATCCCGGTGATGCGGCGCGGAGCGGAGCAGCTAACCTTCTCGGTGGGATCCCGGGTTCTCAATGGAGCGGATCAGTGCGCAGGTCGCGGATATCCGACGCGGGATTGGACCAGCCGcaattcattcttctcttcaaAATCACGATCCAAAACATCAAAGCTTCATCGTACTCTTCATCTCCACCTCCTAACTTCTTCAAAGCTTCATCATCTCTCCAAAAATTGGTGTATGAAAATGATAATTTAACTTGGTCTCAAGTTGCCGAAGCAAGTGGGGTTAATGAGCCTCTAGTTTACACTAGGAGCCAAAGAGCAAAAGATTTGGCAGTTGCATGTGCACGCAAGGAAACAATGGCACAACAAGTGGAGGATGAAGGTGTTGAAGAAATTGGAGATGATGTTGAAGATAATGTTGTGGAGGCCGATGAGGATTATGAAGAAAACAATGAGTTTGATGATAATTATTAG 3192 0.3731 MANYEEQSDCFTYDVFLSFRGEDTRNSFIGYLREEFRKRRINAFYDDKNLRIGEDMSPAFFKAIEESNISVIVLSKDYASSTWCLDELVKIMECTERNKKQIAFPIFYHVDPSDVRKQRNSYGKAMVAHQKRFGKNTEKIKAWTAALSKVPNLKGHHHHIHNGHEIDHVKEIAEKVHANIAPKHLLVGENPVGLNQHIEKVKSLLDLKPNDDTMCMLGIIGLGGIGKTELAKAMYNKIVHQFEAASFLANVREKSNKINGLEDLQKTLLSEMFQQPETEFGSTSKGIYEIKHKLERKKDMGREIVRQEAPNNPAKRSRLWFHQDVIDVLSANDSGSDAIQGIMLEPPDYMTEVYLNDSSFEKMSRLRILTVRFTTFSSEPKHLPNHLRLLDWEKYPSKTLPPKFYPRNIIILNLRNSQFTIKKPFQQFSYLTVMDFSYSKSIKRMPDVSKVENLRELKLDCCENLTTLHESIGFLKHLVHLSASRCTNLNHFLQRMFLPSLEVLDLKYCVNLEHFPDIVNKMNKPLEIRMSHTSIKKLPDSIGNLIGLVSINMYGCMKLKYLPISLFRLPNVVGFNFKGCTKLGESLRRFLHDSPSEANGHSTLKTMYFSCSGLSDEDILTILIWFPKLEKLSVSFSYNLVSLPACIKEFNHLTYLDVSHCKKLKEIPHCTNLRILKVEHCTSLAHISELPCTIQTIDARKCLEFSSETSDMLWDQVKKERHGLEIVMSRYYKVPKWFDYSRKGGIPCLWVREKFPISNCAFALVFQAAPDGIYRLDFVQLHLVINGQSVSHKVGYFSVIEPDHVLVCDLRLFYNDEEWLSIDALLLKHEWNQVQISYEYDRISVTLRSNYDDRGFFKHDDSNDAADNENCDDITIGIDDIPNPTNQEVDETQDTPYPSEVNNARSRWDPGDAARSGAANLLGGIPGSQWSGSVRRSRISDAGLDQPQFILLFKITIQNIKASSYSSSPPPNFFKASSSLQKLVYENDNLTWSQVAEASGVNEPLVYTRSQRAKDLAVACARKETMAQQVEDEGVEEIGDDVEDNVVEADEDYEENNEFDDNY 1063
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu05g03713 1063 MobiDBLite consensus disorder prediction 1028 1063 - -
Tsu05g03713 1063 SUPERFAMILY Toll/Interleukin receptor TIR domain 5 155 IPR035897 -
Tsu05g03713 1063 PRINTS Disease resistance protein signature 216 231 - -
Tsu05g03713 1063 PRINTS Disease resistance protein signature 496 512 - -
Tsu05g03713 1063 MobiDBLite consensus disorder prediction 1031 1063 - -
Tsu05g03713 1063 SUPERFAMILY L domain-like 306 703 - -
Tsu05g03713 1063 MobiDBLite consensus disorder prediction 878 913 - -
Tsu05g03713 1063 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 187 294 IPR027417 -
Tsu05g03713 1063 Gene3D - 183 305 IPR027417 -
Tsu05g03713 1063 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN 298 825 IPR044974 GO:0006952
Tsu05g03713 1063 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN 8 298 IPR044974 GO:0006952
Tsu05g03713 1063 MobiDBLite consensus disorder prediction 880 902 - -
Tsu05g03713 1063 ProSiteProfiles TIR domain profile. 11 180 IPR000157 GO:0007165
Tsu05g03713 1063 SMART till_3 12 153 IPR000157 GO:0007165
Tsu05g03713 1063 Gene3D - 12 182 IPR035897 -
Tsu05g03713 1063 Gene3D Ribonuclease Inhibitor 349 527 IPR032675 -
Tsu05g03713 1063 Gene3D Ribonuclease Inhibitor 528 722 IPR032675 -
Tsu05g03713 1063 Pfam TIR domain 13 176 IPR000157 GO:0007165
Tsu05g03713 1063 PANTHER RESISTANCE PROTEIN (TIR-NBS-LRR CLASS), PUTATIVE-RELATED 298 825 - -
Tsu05g03713 1063 PANTHER RESISTANCE PROTEIN (TIR-NBS-LRR CLASS), PUTATIVE-RELATED 8 298 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tsu05g03713 Tsu-Chr5 48404483 48412144 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tsu05g03713 301 590 WRKY Transcription Factor Family AT4G12020 35.922 4.28e-38 153
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu05g03713 - - mtr:MTR_5g090870 751.125