Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu05g03710 ATGGAAAATGCCTTAAGAGCATGCTGTAAAGGTATTAAGATTGGGAAAATTCTGATCCACAGAGAAGGTGACAATGGTCAACAGGGTTGTGACGTTACTCGTGGTATCGCTGCAAATTACTTAGACACTCGGTTAAACTCTTTGACTGACTATTGGTGTAATTCGGCTGTTCAAGCGATTTCGTTACTTATACAAAAGTGCGTACCAGAATCCaacattatatttcttaatcTCATATCTGCTCCTAAAGGTGTTCATGTGGTCTGCAAAAGTTTCCCAAGAATTAAAATAGTGACATCTGAGATAGAGATTGGTTTGAACGAAGATTTTCGTGTCATACCGGGCATGGGTGAGTTTGGAGATCGGTACTTTGGAACCGATGATGATGAACAAGTGATGGTTATTTCACAGTAA 414 0.3865 MENALRACCKGIKIGKILIHREGDNGQQGCDVTRGIAANYLDTRLNSLTDYWCNSAVQAISLLIQKCVPESNIIFLNLISAPKGVHVVCKSFPRIKIVTSEIEIGLNEDFRVIPGMGEFGDRYFGTDDDEQVMVISQ 137
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu05g03710 137 Pfam Uracil phosphoribosyltransferase 1 126 - -
Tsu05g03710 137 Gene3D - 1 126 IPR029057 -
Tsu05g03710 137 SUPERFAMILY PRTase-like 1 127 IPR029057 -
Tsu05g03710 137 PANTHER URIDINE KINASE 1 129 - -
Tsu05g03710 137 PANTHER URIDINE KINASE 1 129 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tsu05g03710 Tsu-Chr5 48383860 48385151 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tsu05g03710 1 129 PRT Gene Family AT1G55810 74.419 1.08e-58 186
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu05g03710 K00876 - gmx:100527893 190.274