Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu05g03706 atgatgatgatgtctTCGTCAGGTGGAGCATTCAGGCTTCGTTGGGATGTATTTTTGAGTTTCAGAGGAGAAGATACGCGCAAATGTTTCACAAAAAAACTATACGAATCTCTTTATCGCGAAGGAATTCGTGCTTTCATGGACGACGAGGGTTTGGATCGTGGGGACCACATACAAACAAGTTTGCTTCAAGCCATTGATGACTCTGCTGCTTCCATTGTTATTATTTCTCAACACTATGCTGATTCTCATTGGTGTCTCGATGAACTCGCCAGAATTTGTGATTCCGGAAGGCTTGTTATTCCTGTTTTCTATAAGGTCGATCCTTCTCATGTTAGGAAACAATTGGGTTCTTTTAAAAAAGGTTTTGATTATCTTGAACAAAGGTTTCAAGATCAGAAAGATAAAGTTTCCAAGTGGAGACAATCTATGCTTAAACTTGGTGGATTTGCTGGCtttgttttcaaaaataatagTGATGATAGCGAGCATGAGAATCTGATACGCCGATTGGTACAAAGAGTTTTGAAGGAGTTAAGTAATACTCCAATGGTTGTGTCTGAGTTTGCAGTGGGGCTCAACAAACGTGTTGACAAGGTGATGGATTTATTACAAGTTCGATCCAACGGTGTCAATGTTTTGGGGTTGTATGGGATGGGTGGTATTGGTAAGACAACCCTAGCCAAGGCTCTTTTCAATAGTCTTGTTGGTCGTTTCGAGCGTAGATGCTTCATTTCCAATGTGAGACAATTTTCATCTAAAGAAGATGGTCTGGTTTCTCTTCAAAGCAATGTCATTAAAGATCTTTCTCCTGAAAATGCTCAGAGTGTAATCATTGATGTCAATGCTGGTATATCTGTTATCAAAAGAATAATTCATGAAAATCGAGTTCTGCTAGTGTTGGATGATGTTGATAATGTAAATCAGCTCGATGCTTTGATTGGTAAAAGGGAGTGGTTTTATGAAGGAAGCTGTATAATAATTACAACACGGGATATAACTGCTTTGCCGGAAAAACATGTCAATAAGTTGTATGAAGTTACAGAATTGGATACTGAAGAAGCTCTGGAGTTATTCAGTTACCATGCACTAAGGAAAAAGGAACCTCCACAAAATTTTCTggatttttcaaataaaattgtgTCTCTTACAGGAAGAATGCCATTGGCTTTGGAAGTGTTTGGTTGCTTTCTGTTTGATAAGAGGAAAGTGAATGAATGGGAGGATGCTGTTGAGAAGCTGAAAACAATTCGCCCCAGGAGTCTTCATGATGTGTTGAAGATAAGTTATGATGGGTTGGATGAACAAGAGAAGTGTATATTCCTTGATATTGCTTGTTTCTTTGTTCATATGGGAACAAAGCGCGATGATGTGATTGATATAATGAGAGGTTGTGGTTTTAGAGGAGAGATAGCTATGACAACCCTTGTAGAGAAATGCTTAATCAAAATAAGACAGGACGACAATACCTTGTGGATGCATGATCAGATTAGAGATATGGGAAGACAGATTGTTCTTAATGAAAACCATGTTGATCCTGGGATGCGTAGTAGATTGTGGGATCGAGCTGAAATCATGTCTGTTTTGAAGAGTAAGAAGGGAACAAGATGCGTACAAGGAATTGTACTAGATTTTAAGGAAGGACCGAGTTATCGTCATCAACATCAAGCAGAGAAATATAACACAGTTATACTTGATACAAAATCTTTTGAACCAATGGTTAGCTTGAGATTGCTTCAGATCAATAATCTGAGTTTGGAAGGCAAGTTTCTTCCAGATGAACTGAAGTGGCTACAATGGCAAGGATGTCCTTTAGAAGGCATACCTTTGGATACTTTGCCACGTGAACTGGCTGTCCTTGATTTCTCAAATGGCTGGAAAATTAAAAGCTTGTCGGGATTGGAAAAACACAAGGTACCAGAGAACCTAATGGTTATGAACCTCTCCGACTGCTACAACCTTTCTGCAATCCCTGATTTATCTTGGTGTCCCAGGTTAGAGAAAATTAATTTGGAGAGCTGCATTAATCTAGAAAGGATTCATGAATCAATTGGCAGTTTAACTACCTTGCGTAATTTGAATTTGACGCGTTGTGAAAAGCTTATTGAACTTCCTAGTGATGTCTCTGGACTGAAACATTTGGAGTGCCTCTTTCTTTCTAAGTGCAAAAAGTTGAAAGCATTGCCAGAAAACTTAGGCATTCTTAAATCTCTGAAAACACTTTTTGCGGATGACACTGCTATAGTAAAGTTGCCAGAGTCCATTTTCCGCCTGACCAAACTCGAACGACTTGTTTTAAATCGTTGCTATAATTTGAGGAGACTACCGAACTGCATTGGAAAACTATGTTCTTTGCAAGAATTATCTCTTGATCAATCAGGTTTACAAGAATTACCCAATACTGTTGGATCCTTGAAAAACCTTGAGAAATTAAGTTTGATTTGGTGTGAATCTGTCACTCGAATGCCTGATTCTATAGGAAATCTTGAATCGTTGACAGAACTTTTGGCTTACGGCAGTGGAATTAAAGAGCTTCCTTCCACCATTGGTTCTTTATCTTATCTGAGGACGTTATCGGTTGGAAATTGTAAACTTCTCAGTAAGTTGCCCGACTCACTTAAAACTATGGCCTCAATAATTGAACTTGAGTTAGATGGAACGTCTATACGACATCTTCCAGATGAAATTGGAGAATTGAAACAACTGAGGAAACTTGAGATTGGGAATTGTAGCAGTCTTGAATCGTTACCAGAATCCATTGGCCACCTAGCATCTCTTACTACATTGAACATAATCAATGGAAATATAAGAGAATTGCCAGCGTCGATTGGATTACTAGACAATCTTGTTAACTTAACACTGAACAAATGTAGAATGCTTAAACAGCTTCCAGCTTCTATAGGCAACTTGAAATCTCTTTGTCACTTAAAGATGGAGGAAACAGCTATGAAAGACTTGCCTGAAAGTTTCGGTATGCTCTCAAGCTTGAGAACACTGAGAATGGCAAAGAGGCCTCATTTAGTTCCCATATCAGTGGAGAACACTGGCTCTTTTGTGCTACCGTCTTCTTTTTGTAATCTGACCTTGCTATATGAGTTGGATGCTCGTGCCTGGAGATTATCTGGGAAAATTCCTGACGATTTCGAGAAGCTATCATTATTAGAGACTTTAGATTTGGGCCAAAATAATTTTCACAGCCTTCCTTGCAGTTTGAAAGGTCTTTCCTTTCTCAAAAAGCTCTCACTGCCAAATTGCACACAGCTGATTTCTCTCCCCTCACTTCCTTCAAGCTTGATCGAGCTAAACGCTGATAAGTGCTACGCATTAGAAACTATACATGACATGTCAAATTTAGAGAGTTTGGAGGAGCTGAAACTCACAAATTGCGAGAAAGTGGTGGATATTCCAGGTCTTGAATGCTTGAAGTCCTTGAAAAGATTGTACTTGAGTGGTTGCAATGCATGCTCCTCTAAAGTATGCAAAAGACTTTCAAAGGTTGCACTGAGAAATTTTCAGAACTTGAGCATGCCAGGAACCAAATTACCTGAATGGTTTTCAGCCAAAACTGTAAGCTTTTCGAAGCGCAAAAATCTCGAGTTAACAAGTGTAGTTGTAGGTGTTATTGTTTCAATTAACcacaacattgatatacctataaagagagaagaaatgCCTTGTATCATTGATGTTGAAGCAAGTGTTTTCAAACTTgggaaacaaatatttaatacaACTTTAAACATACAAGGAGTGCCAAGGACAAATGTAGATCACATACACTTGTGTAGATTCCAGAATTACCATCAATTGGTAGCCTTTCTAAAAGATGCTGATACTTTTTCTGTGACCACGAGAAGTCCTCCTTTTGATAAAGGATTGAAGTTGAAGAAATGCGGAGTTCATTTAATCTTTGAAGGGGATGATGATTATGAGGGAGAGGAAGAATCAATAGACATAGGCCTACAATCTGTCTCAGAAAGGTTGGCCAGGTTTTTTAACACTTGTGATGAAGGTGTTGATGATATTGAGAGTGAAGATGATCAGTGTCAACATGAATTGGAGCAAGAAAAGCAAGAGCATGGAAGAACTAAATTACTTTCTGTTAAAGGAAATTACATGCTTTTCTTCCAGCTTAGTCTATTCTTTGTGCTGTTGAGTTGGTTTTGGTTCAAGTTTATGTCTAGTGCTGTAAAAAGAGATTGA 4203 0.3771 MMMMSSSGGAFRLRWDVFLSFRGEDTRKCFTKKLYESLYREGIRAFMDDEGLDRGDHIQTSLLQAIDDSAASIVIISQHYADSHWCLDELARICDSGRLVIPVFYKVDPSHVRKQLGSFKKGFDYLEQRFQDQKDKVSKWRQSMLKLGGFAGFVFKNNSDDSEHENLIRRLVQRVLKELSNTPMVVSEFAVGLNKRVDKVMDLLQVRSNGVNVLGLYGMGGIGKTTLAKALFNSLVGRFERRCFISNVRQFSSKEDGLVSLQSNVIKDLSPENAQSVIIDVNAGISVIKRIIHENRVLLVLDDVDNVNQLDALIGKREWFYEGSCIIITTRDITALPEKHVNKLYEVTELDTEEALELFSYHALRKKEPPQNFLDFSNKIVSLTGRMPLALEVFGCFLFDKRKVNEWEDAVEKLKTIRPRSLHDVLKISYDGLDEQEKCIFLDIACFFVHMGTKRDDVIDIMRGCGFRGEIAMTTLVEKCLIKIRQDDNTLWMHDQIRDMGRQIVLNENHVDPGMRSRLWDRAEIMSVLKSKKGTRCVQGIVLDFKEGPSYRHQHQAEKYNTVILDTKSFEPMVSLRLLQINNLSLEGKFLPDELKWLQWQGCPLEGIPLDTLPRELAVLDFSNGWKIKSLSGLEKHKVPENLMVMNLSDCYNLSAIPDLSWCPRLEKINLESCINLERIHESIGSLTTLRNLNLTRCEKLIELPSDVSGLKHLECLFLSKCKKLKALPENLGILKSLKTLFADDTAIVKLPESIFRLTKLERLVLNRCYNLRRLPNCIGKLCSLQELSLDQSGLQELPNTVGSLKNLEKLSLIWCESVTRMPDSIGNLESLTELLAYGSGIKELPSTIGSLSYLRTLSVGNCKLLSKLPDSLKTMASIIELELDGTSIRHLPDEIGELKQLRKLEIGNCSSLESLPESIGHLASLTTLNIINGNIRELPASIGLLDNLVNLTLNKCRMLKQLPASIGNLKSLCHLKMEETAMKDLPESFGMLSSLRTLRMAKRPHLVPISVENTGSFVLPSSFCNLTLLYELDARAWRLSGKIPDDFEKLSLLETLDLGQNNFHSLPCSLKGLSFLKKLSLPNCTQLISLPSLPSSLIELNADKCYALETIHDMSNLESLEELKLTNCEKVVDIPGLECLKSLKRLYLSGCNACSSKVCKRLSKVALRNFQNLSMPGTKLPEWFSAKTVSFSKRKNLELTSVVVGVIVSINHNIDIPIKREEMPCIIDVEASVFKLGKQIFNTTLNIQGVPRTNVDHIHLCRFQNYHQLVAFLKDADTFSVTTRSPPFDKGLKLKKCGVHLIFEGDDDYEGEEESIDIGLQSVSERLARFFNTCDEGVDDIESEDDQCQHELEQEKQEHGRTKLLSVKGNYMLFFQLSLFFVLLSWFWFKFMSSAVKRD 1400
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu05g03706 1400 Gene3D Ribonuclease Inhibitor 1010 1212 IPR032675 -
Tsu05g03706 1400 PRINTS Disease resistance protein signature 897 913 - -
Tsu05g03706 1400 PRINTS Disease resistance protein signature 213 228 - -
Tsu05g03706 1400 PRINTS Disease resistance protein signature 384 398 - -
Tsu05g03706 1400 PRINTS Disease resistance protein signature 291 305 - -
Tsu05g03706 1400 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN 12 1293 IPR044974 GO:0006952
Tsu05g03706 1400 PANTHER TMV RESISTANCE PROTEIN N-LIKE 12 1293 - -
Tsu05g03706 1400 Gene3D - 177 343 IPR027417 -
Tsu05g03706 1400 SUPERFAMILY L domain-like 866 1183 - -
Tsu05g03706 1400 SUPERFAMILY L domain-like 492 885 - -
Tsu05g03706 1400 Gene3D - 349 434 IPR042197 -
Tsu05g03706 1400 SMART till_3 14 150 IPR000157 GO:0007165
Tsu05g03706 1400 ProSiteProfiles TIR domain profile. 13 176 IPR000157 GO:0007165
Tsu05g03706 1400 SMART LRR_CC_2 805 838 IPR006553 -
Tsu05g03706 1400 SMART LRR_CC_2 899 926 IPR006553 -
Tsu05g03706 1400 SMART LRR_CC_2 852 879 IPR006553 -
Tsu05g03706 1400 SMART LRR_CC_2 663 690 IPR006553 -
Tsu05g03706 1400 SMART LRR_CC_2 1118 1144 IPR006553 -
Tsu05g03706 1400 Pfam TIR domain 15 183 IPR000157 GO:0007165
Tsu05g03706 1400 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 181 444 IPR027417 -
Tsu05g03706 1400 Coils Coil 1339 1359 - -
Tsu05g03706 1400 Pfam NB-ARC domain 195 418 IPR002182 GO:0043531
Tsu05g03706 1400 Gene3D - 12 176 IPR035897 -
Tsu05g03706 1400 Gene3D Ribonuclease Inhibitor 839 1009 IPR032675 -
Tsu05g03706 1400 Gene3D Ribonuclease Inhibitor 560 737 IPR032675 -
Tsu05g03706 1400 Gene3D Ribonuclease Inhibitor 743 838 IPR032675 -
Tsu05g03706 1400 SMART LRR_typ_2 735 758 IPR003591 -
Tsu05g03706 1400 SMART LRR_typ_2 876 899 IPR003591 -
Tsu05g03706 1400 SMART LRR_typ_2 923 946 IPR003591 -
Tsu05g03706 1400 SMART LRR_typ_2 1051 1073 IPR003591 -
Tsu05g03706 1400 SMART LRR_typ_2 782 805 IPR003591 -
Tsu05g03706 1400 SMART LRR_typ_2 829 852 IPR003591 -
Tsu05g03706 1400 SUPERFAMILY Toll/Interleukin receptor TIR domain 4 151 IPR035897 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tsu05g03706 Tsu-Chr5 48333796 48340415 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tsu05g03706 15 858 WRKY Transcription Factor Family AT4G12020 29.425 4.24e-74 271
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu05g03706 - - mtr:MTR_8g062130 2256.1