Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu05g03699 ATGGCAAATTATGGAGACCAGTCATGTGGTTTCACCTACGATGTTTTCCTCAGTTTTAGAGGGGAAGACACACGTCACGATTTTATTGGATATCTTCGCGATGCGTTGCGGAAGAGAGGAATCAATGCTTTCTTTGATGATAAGAATTTGAGAATAGGGGATGATATTTCACCTGCACTTTTAAAAGCCATTGAAGAATCTAAGATCTCAGTTATTGTTTTTTCTGAGAATTATGCATCTTCTAGGTGGTGCCTTGGCGAACTTGTGAAGATCATCGAGTGCACGAAAAGAAATAACAATCAAATTGCTTTCCCAATTTTTTATCATGTTGATCCATCTGATGTACGAAATCAAAGAAATAGTTATGAAGAAGCCATGGTTACTCATCAGAATAGGTTTGGAAAAGACTTGGAAAATATAAAAGCATGGAAAACAGCATTATCTGAAGCTGCAGACTTGAAAGGCCACCATATCCACACTGGGTTCGAAATTGATCATATTAAAGAGATTGTTGAAAAGGTCCATGCTAAGATAGCTCCTAAACCTTTACTTGTTGGTGAGATTCCAGTTGGACTTGATCAACACATAGAAGAAGTGAAGTCACTTCTAGACATGAAGCCAAATGACGATACTATATCCATGTTGGGCATATGCGGACTTGGTGGAATAGGGAAAACAGAACTTGCCAAAGCATTGTACAACAAGATTGTGCACCAATTTGAAGCTGCAAGTTTTCTTGCCAATGTTAGagagaaatcaaataaaatcaatggccCAGAAGATTTACAACAGACACTTTTATCAGAGATGTTTGAGCAGCCTGAAACCGGGCTGGGAAGTACAAGTAAAGGAATCTATGAAATAAAACACAAGCTTGGAAAGAAAAAGGTTCTTTTGgttcttgatgatgttgatgagaAGAAACAATTAGAAAACCTGGCAGGAGGAAATGATTGGTTTGGTCCAGGTAGTAGGATCATTATAACTACAAGGGACAAAGGTTTGCTCATAGGTACTCATTCTTTTGTAGTTCAAAAATTTTATGAAATGACTCAACTTAATGATCAACATTCGCTTGAGTTGTTTTGTCAAAATGCCTTTGGTAAAAGCCATCCTAAAACAGGATATGAAGCTATGTCTTCTCGCGCGGTTAGTTATGCGAAAGGTCTTCCATTGGCTTTAAAAGTTATAGGCTCCAATTTGGCTactagaaaaagtttaaaagcTTGGGAGCATGCATTGAAAGAGTATGAAAGGATTCCACGTAAAGGGATGCAAGATGTTCTTAAAGTAAGCTATGATGTGTTGGAGCCTTATGCTCAGAGTGTTTTCCTTGATATAGCTTGCTTCTTCAAAGGGAAAAGAATAGAATATGTTGAAGAGATACTTGCTGAATTCAGTGCAGCATCGAATATTGAAGAGCTTGTTAATAAATCTCTCTTGATTGTTGAACATGGATACTTGAATATGCATGATCTAATACAGGATATGGGTAGAGAGATTGTTAGGCAAGAGGCACCGGATCCGGCGAAACGTAGTAGATTATGGTTTCATCAAGATGTCATCGATGTATTGTCAGCTGACGACAATGGAAGTGATGCAATTCAAGGGATAATGCTTGATCCTTCCCAACATATAAAAGTAGTAGATTGGAATGGTACTGCTTTTGAAAAGATGAACCGCCTCAGAATTCTCATTGTtcgaaaaacaaaattttcatcagAGCCTAAACATCTGTCAAATCATTTAAGGTTGCTTGATTGGGAGTTATACCCTTCAAAGTCTTTCCCACCAAAATTTTATCCGAAGAATATCATCATCTTAAATATGCCTTATAGTCGACTTACAATGGAAGAGCCACTTATGCAATTTCCATATTTGACTGTCATGAATTTCTCAAATAACCAATCTATCACAGCAATGCCTGATGTGTCCAATGTTGAAAATTTGAGAGAATTGCAACTTGATGATTGTAAGAACTTAACTATGGTTCATGAATCCATTGGATTTCTCAAACATCTTGTCCACTTAAGCGCTTCGGGATGCACCAAACTTGAAAACTTTCTGGAAAGAATGTTTTTACCATCTCTAGAAGTCCTTGACCTTAATTTGTGTGTAAAACTTGAACACTTCCCAGATATAGTGAACGAGATGAATAAACCATTGAAGATTCATATGATCCATACCTCTATTAAGAAGCTGCCAAATTCCATTGGTAATCTTATTGGACTTGTTTCGATAGAGATGCAACATAGCAAGAATCTTGAATATCTACCAAGTAGCTTATTCACGTTATCAAATCTTGTTGCTTTTAAATTTGGAGGATGTTCTAAACTTGGTGAATCTTTCAGAAGATTTCTACATGATAGTGCTTCAGATGCTACTGTCTGGTTAACCTTAAAAACTATACATTTTGAAAATAGTGGTTTGTCAGATGAAGATATTCAGGCAATTCTCGTATGTTATCCAAACTTAGAAGAGTTGATTGCATCAGATAACAATTTGGTCTCTCTCCCTGCGTGCATTAAAGAGTCTGCTCACTTGACAAATCTTGATGTTAGTAGTTGCAATATGCTTCGAAATATTCCCGAATGCACCAACTTGAGAATTCTGAATGTCCATGGTTGTGTGAATCTTGAACATATTTCAGAGCTTCCATgcactattaaaaaaatagatgcAAGATATTGCTTCAACTTTTCTTCAAAGACATCAGACATGCTATGGGATCAGGTGAAAAAAGAGAGGCATGGATTAGAAATTGTGATGCCTAGAACCAAGGTTCCAGAATGGTTTGATTATAGGTGCAAAGGAGGAGTTCCATGTTTATGGGTTCATGGCAATTTTCCCAATGTTTCTGTAGCATTGGTGTTCCAAGGTGTGGTTGGGAAGGAAAGTGAAATTGgtcagcaacttgttgaactTAACTTGGTTATCAACGGTCAATATGTCCCTCGCAAAGGCTATTACGACTTCAAAGTTGAACGAAATCATGTTTTAGTTTGTGATCTACGACTCTTGTTCAACGACGAGGAATGGCTAAGCCTTGATGCATTATTTCTTGAGCATGAATGGAATCAAGTGCAAGTTCCATATGAAGCCTCGCTCGGTGTGACACTAAGTGAATGGGGAGTTTATGTGTACAAACAAGGAACTATGAACTTGGAAGAACGTGTTCAATTCATATGTCCTGACCCAACAAGGTACTCGAACATAGCTAACATAATAGTACCGTCAAAAAATcctttgaagatgatgatggagAAGTTAGCTTTTGATGAAATGTTTAATGAGATATTGGCAGATATAAtggacattttttttgttgacaaattagCAGAAAACATGAACACAGAAAACCAAATTGCAGACAAAATGCAGGCAAATTTTACAAGATCATATAAtgataaagataaagatgaGCCTCCAACTCCAAGCCTAAACTATAAGGATGAGCTCCACCAAAGGACAAATTTTATGGGAGAATCCGAATTCGGATTATGGGTGGAACAATACTTGAttagactttacttacttcCGGGACGAATTCCAGATTACCAAGGTCCTCTTCCTCTGGAAATCAGAGGGTTAACACCCAAAGAAACCCCCCATAAGGATGAAATAATGAAACCACCTACGGATGCATATGTAGGAGAAACTTCCACCTCTGGCCATAAGAAAAGCTTGAAAGCACAAGCACGAGAAATATTGATGAAAATATTCTTGTTTGGAATGAGTGCAGGTAAATGGGTTATATTGTCACTCTTAAGATCTGCGGTACGAATGAAGATATATGTTGAAGGAATTTTCAATGAACTATGGGAAGCACACCTGAGCTTTTCCACTTTAGACTCAAGTAAAACTATTACAAATGGTTACCGGCCTACTTCGAAAACTATGTTTTGGGGTCCCGATTGTGGTTCATCTACACGACGATGGAGAGGGGCTCCTTATCTGTCTTCGCTTAGAGTTGGTAAAGGGGAACCAACAATTTCCTCTTCATATAGGATGAGATGTCGATCATCAACATCTCATACCTACAACATCTGTCAGTCACCGATGAACCTTCGTATGTCTCAAGAGACTAGACATGTGAGCATCTGTTTGATCTCCTCCGGTGCACACATTCAGAGGAACTTATGGAGTTGGATTCTACCATAG 4161 0.3627 MANYGDQSCGFTYDVFLSFRGEDTRHDFIGYLRDALRKRGINAFFDDKNLRIGDDISPALLKAIEESKISVIVFSENYASSRWCLGELVKIIECTKRNNNQIAFPIFYHVDPSDVRNQRNSYEEAMVTHQNRFGKDLENIKAWKTALSEAADLKGHHIHTGFEIDHIKEIVEKVHAKIAPKPLLVGEIPVGLDQHIEEVKSLLDMKPNDDTISMLGICGLGGIGKTELAKALYNKIVHQFEAASFLANVREKSNKINGPEDLQQTLLSEMFEQPETGLGSTSKGIYEIKHKLGKKKVLLVLDDVDEKKQLENLAGGNDWFGPGSRIIITTRDKGLLIGTHSFVVQKFYEMTQLNDQHSLELFCQNAFGKSHPKTGYEAMSSRAVSYAKGLPLALKVIGSNLATRKSLKAWEHALKEYERIPRKGMQDVLKVSYDVLEPYAQSVFLDIACFFKGKRIEYVEEILAEFSAASNIEELVNKSLLIVEHGYLNMHDLIQDMGREIVRQEAPDPAKRSRLWFHQDVIDVLSADDNGSDAIQGIMLDPSQHIKVVDWNGTAFEKMNRLRILIVRKTKFSSEPKHLSNHLRLLDWELYPSKSFPPKFYPKNIIILNMPYSRLTMEEPLMQFPYLTVMNFSNNQSITAMPDVSNVENLRELQLDDCKNLTMVHESIGFLKHLVHLSASGCTKLENFLERMFLPSLEVLDLNLCVKLEHFPDIVNEMNKPLKIHMIHTSIKKLPNSIGNLIGLVSIEMQHSKNLEYLPSSLFTLSNLVAFKFGGCSKLGESFRRFLHDSASDATVWLTLKTIHFENSGLSDEDIQAILVCYPNLEELIASDNNLVSLPACIKESAHLTNLDVSSCNMLRNIPECTNLRILNVHGCVNLEHISELPCTIKKIDARYCFNFSSKTSDMLWDQVKKERHGLEIVMPRTKVPEWFDYRCKGGVPCLWVHGNFPNVSVALVFQGVVGKESEIGQQLVELNLVINGQYVPRKGYYDFKVERNHVLVCDLRLLFNDEEWLSLDALFLEHEWNQVQVPYEASLGVTLSEWGVYVYKQGTMNLEERVQFICPDPTRYSNIANIIVPSKNPLKMMMEKLAFDEMFNEILADIMDIFFVDKLAENMNTENQIADKMQANFTRSYNDKDKDEPPTPSLNYKDELHQRTNFMGESEFGLWVEQYLIRLYLLPGRIPDYQGPLPLEIRGLTPKETPHKDEIMKPPTDAYVGETSTSGHKKSLKAQAREILMKIFLFGMSAGKWVILSLLRSAVRMKIYVEGIFNELWEAHLSFSTLDSSKTITNGYRPTSKTMFWGPDCGSSTRRWRGAPYLSSLRVGKGEPTISSSYRMRCRSSTSHTYNICQSPMNLRMSQETRHVSICLISSGAHIQRNLWSWILP 1386
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu05g03699 1386 Gene3D Ribonuclease Inhibitor 725 917 IPR032675 -
Tsu05g03699 1386 Gene3D Ribonuclease Inhibitor 517 724 IPR032675 -
Tsu05g03699 1386 Gene3D - 352 437 IPR042197 -
Tsu05g03699 1386 SUPERFAMILY L domain-like 490 886 - -
Tsu05g03699 1386 SMART till_3 12 153 IPR000157 GO:0007165
Tsu05g03699 1386 MobiDBLite consensus disorder prediction 1201 1222 - -
Tsu05g03699 1386 Pfam NB-ARC domain 193 436 IPR002182 GO:0043531
Tsu05g03699 1386 Pfam TIR domain 13 174 IPR000157 GO:0007165
Tsu05g03699 1386 Coils Coil 1109 1129 - -
Tsu05g03699 1386 PRINTS Disease resistance protein signature 214 229 - -
Tsu05g03699 1386 PRINTS Disease resistance protein signature 291 305 - -
Tsu05g03699 1386 PRINTS Disease resistance protein signature 387 401 - -
Tsu05g03699 1386 PRINTS Disease resistance protein signature 692 708 - -
Tsu05g03699 1386 Gene3D - 178 342 IPR027417 -
Tsu05g03699 1386 ProSiteProfiles TIR domain profile. 11 182 IPR000157 GO:0007165
Tsu05g03699 1386 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 182 447 IPR027417 -
Tsu05g03699 1386 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN 20 1060 IPR044974 GO:0006952
Tsu05g03699 1386 Gene3D - 12 177 IPR035897 -
Tsu05g03699 1386 PANTHER RESISTANCE PROTEIN (TIR-NBS-LRR CLASS), PUTATIVE-RELATED 20 1060 - -
Tsu05g03699 1386 SUPERFAMILY Toll/Interleukin receptor TIR domain 7 155 IPR035897 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tsu05g03699 Tsu-Chr5 48272741 48277740 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tsu05g03699 13 779 WRKY Transcription Factor Family AT4G12020 30.905 8.46e-86 308
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu05g03699 - - mtr:MTR_5g090940 1592.79