Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu05g03697 ATGTGTAATGGAAAAGTTGAATTCAGTGTGAATATGACAAACGAGGAAACAGTGGCAGCTGCACTACCAATGCAAGAACATTGGTTGCCACTATCAAATCTTGATTTGATTCTTCCTCCTGTTGATGTTAGTGTCTTTTTTTGCTACAATAAACCTATAATTACTATTGGCACCCACCATAATAATATTGTGGAGTGTTTGAAAAATTCATTAGCTGAGGCTCTTGTTTCTTATTATGCCTTTGCTGGTGAAATTGTGGCTAATTCCATGGGTGAACCTGAGTTACTTTGCAACAATCGTGGTGTGGATTTTGTTGAAGCTTTTGCTGATATTGAATTACAATCTCTCAATTTGTATAATCCAGATGAATCTGTTGAAGGGAAGCTTGTTCCAAAGAAGAAACATGGTGTGCTTGCTGTTCAGGTAACATGGATGAAATGTGGTGGATTAGTAGTAGCGTGCACTTTTGACCATCGCATAGCAGATGCCTATTCTGCAAACATGTTCTTTGTATCTTGGGCTGAGATTGCCCGACCCAAGAATAACAAATCTTTCATTCCAACAACACAACCTTGTTTTAGGAGGTCTCTTTTGACCCCACGGCGCCCACCTTCCATTCATCCTTCACTTTATGATATGTATGTCCCCATCACTGATCTACCTCCTCCACCTGCACCTGAGCTTGAATCCGATATTAAAACTGATCCAATAATAAGTCGCATATACTACGTCACAAGTGAAGAACTCAACAACATGCAGTCATTAGCCAACTCAAACAACAGTTCTAGCACTAAGCGCTCAAAACTTGAATCATTTTCTGCTTTATTGTGGAAGATGGTTGCTGCGGCCGCTTCAACTGATAATGAAAATATTGTTGCAAAAATGGGGTTGGTTGTTGATGGAAGAAAGAGGCTAAGCAACGGTGACAAAAACAAGGAAGAGATTATGAGTTCATATTTTGGGAACGTGCTTTCAATTCCCTATGGTGGTAGATTGGGGAACGAGTTGGTTGAAAATCCATTAAGTTGGGTGGCAGACCGAGTTCATGATTTTTTGGAGGAGGCAGTGACTGAGGAGCATTTCTTGGGACTAATTGATTGGGTGGAAGAGCATCGACCAATTCCGGGGTTGGCGAGGATTTATTGTGGTAGCACTGGTGGAGAAGGGGGCCCGACATTTGTGGTGTCGTCCGGCCAAAGGTTTCCCGAGTCGAAGGTGGATTTTGGATGGGGGAAGCCTGTGCTTGGATCTTATCATTTTCCTTGGGGTGGTGATGCTGGATATGTTATGCCAATGCCTAGTCCTAAAAGGAATGGTGATTGGTTGCTCTATATGCACCTCCCTAAGACACACTTGCACTACATGGAGGCTCGAGCTCCCCATTTCTTTAGGCCAATCTCTTGGGATTACCTTCtcaattga 1422 0.4241 MCNGKVEFSVNMTNEETVAAALPMQEHWLPLSNLDLILPPVDVSVFFCYNKPIITIGTHHNNIVECLKNSLAEALVSYYAFAGEIVANSMGEPELLCNNRGVDFVEAFADIELQSLNLYNPDESVEGKLVPKKKHGVLAVQVTWMKCGGLVVACTFDHRIADAYSANMFFVSWAEIARPKNNKSFIPTTQPCFRRSLLTPRRPPSIHPSLYDMYVPITDLPPPPAPELESDIKTDPIISRIYYVTSEELNNMQSLANSNNSSSTKRSKLESFSALLWKMVAAAASTDNENIVAKMGLVVDGRKRLSNGDKNKEEIMSSYFGNVLSIPYGGRLGNELVENPLSWVADRVHDFLEEAVTEEHFLGLIDWVEEHRPIPGLARIYCGSTGGEGGPTFVVSSGQRFPESKVDFGWGKPVLGSYHFPWGGDAGYVMPMPSPKRNGDWLLYMHLPKTHLHYMEARAPHFFRPISWDYLLN 473
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu05g03697 473 Gene3D - 225 457 IPR023213 -
Tsu05g03697 473 PANTHER HXXXD-TYPE ACYL-TRANSFERASE FAMILY PROTEIN 8 467 - -
Tsu05g03697 473 Pfam Transferase family 9 457 - -
Tsu05g03697 473 Gene3D - 7 212 IPR023213 -
Tsu05g03697 473 PANTHER TRICHOTHECENE 3-O-ACETYLTRANSFERASE 8 467 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tsu05g03697 Tsu-Chr5 48253121 48255063 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tsu05g03697 10 456 Monolignol Biosynthesis Gene Families AT5G48930 25.109 9.56e-35 133
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu05g03697 - - cam:101501659 797.349