Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu05g03696 ATGTGTATTGGAAAAGTTGAATTCAGTGTGAATATGACAAACGAGGAAACAGTGGCAGCTGCATTACCAATGCAAGAACATTGGTTGCCACTATCAAATCTTGATTTGATTCTTCCTCCTGTTGATGTTAGTGTCTTCTTTTGTTACAATAAACCTATAATTACTATTGGCACCCACCATAATAATATTGTGGAGTGTTTGAAAAATTCATTAGCTGAGGCTCTTGTTTCTTATTATGCCTTTGCTGGTGAAATTGTGGCTAATTCCATGGGTGAACCTGAGTTACTTTGCAACAACCGTGGTGTGGATTTTGTTGAAGCTTTTGCTGATGTTGAATTACAATCTCTCAATTTGTATAATCCAGATGAATCTGTTGAAGGGAAGCTTGCTCCAAAGAAGAAACATGGTGTGCTTGCTGTTCAGGCAACTTGGATGAAATGTGGTGGATTAGTAGTGGCGTTTACTTTTGACCATCGTATAGCAGATGCCTATTCTGCAAACATGTTCTTTGTATCTTGGGCCGAGATAGCCCAACCCAagaataacaaatattttattccaACAACACAACCTTGTTTTAGGAGGTCCCTTTTGACCCCACGGCGCCCACCTTCCATTCATCCTTCACTTTATGACATGTACGTCCCCATCATTGATCTACCTCCTCCACCTGAGCTTGAATCTGATATTAAAACTGATCCAATAATAAGTCGCATATACTACGTGACAAGTGAAGAACTCAACAACATGCAGTCACTAGCCAACTCAAACAATAGTTCTAGCACTAAGCGCTCAAAACTTGAATCATTTTCTGCTTTATTGTGGAAGATGGTTGCCGCGGCCGCATCAACCGATAATGAAAATATTGTTGCAAAAATGGGATTGGTTGTTGATGGAAGAAAGAGGCTAAGCAACGGTGACAAAAACAAGGAAGAGATTATGAGTTCATATTTTGGGAATGTGCTTTCAATTCCCTATGGTGGTAGATTGGCGAATGAGTTGGTTGAAAATCCATTAAATTGGGTGGCAGACCGAGTTCATGATTTTTTGGAGGAGGCAGTGACGGAGGAGCATTTCTTGGGACTAATTGATTGGGTGGAAGAACATCGACCGGTTCCAGGGTTGGCGAGGATTTATTGTGGTAGCACTGGTGGAGAGGAGGGCCCGACATTTGTGGTGTCGTCCGGCCAAAGGTTTCCCGAGTCCAAGGTGGATTTTGGATGGGGGAAGCCCGTGCTTGGATCTTATCATTTTCCTTGGGGTGGTGATGCTGGATATGTTATGCCAATGCCTAGCCCTAAAAGGAATGGTGATTGGTTGCTATATATGCACCTTCCTAAGACACACTTGCACTACATGGAGGCTCAAGCTCCCCATTTCTTTAGACCAATCTCTTGGGATTACCttctcaattaa 1416 0.4174 MCIGKVEFSVNMTNEETVAAALPMQEHWLPLSNLDLILPPVDVSVFFCYNKPIITIGTHHNNIVECLKNSLAEALVSYYAFAGEIVANSMGEPELLCNNRGVDFVEAFADVELQSLNLYNPDESVEGKLAPKKKHGVLAVQATWMKCGGLVVAFTFDHRIADAYSANMFFVSWAEIAQPKNNKYFIPTTQPCFRRSLLTPRRPPSIHPSLYDMYVPIIDLPPPPELESDIKTDPIISRIYYVTSEELNNMQSLANSNNSSSTKRSKLESFSALLWKMVAAAASTDNENIVAKMGLVVDGRKRLSNGDKNKEEIMSSYFGNVLSIPYGGRLANELVENPLNWVADRVHDFLEEAVTEEHFLGLIDWVEEHRPVPGLARIYCGSTGGEEGPTFVVSSGQRFPESKVDFGWGKPVLGSYHFPWGGDAGYVMPMPSPKRNGDWLLYMHLPKTHLHYMEAQAPHFFRPISWDYLLN 471
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu05g03696 471 Gene3D - 223 455 IPR023213 -
Tsu05g03696 471 Gene3D - 4 212 IPR023213 -
Tsu05g03696 471 Pfam Transferase family 9 456 - -
Tsu05g03696 471 PANTHER HXXXD-TYPE ACYL-TRANSFERASE FAMILY PROTEIN 8 465 - -
Tsu05g03696 471 PANTHER TRICHOTHECENE 3-O-ACETYLTRANSFERASE 8 465 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tsu05g03696 Tsu-Chr5 48240571 48242220 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tsu05g03696 10 454 Monolignol Biosynthesis Gene Families AT5G48930 24.675 1.25e-33 129
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu05g03696 - - cam:101501659 781.941