Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu05g03673 ATGGATTCCATTAACACTTGCTGTGACCAGTGGAAGAACAAATACTTGAAAGCTCAACAATCTCGTAATGCTCTTCGTCAAGCTGTCAAGTTTCTTGAACACAAAATCAATGAAATTCATtcccacaacaacaacaacaacaacaatgTGTGTGTTGTAAAAAAAGAATCTGGGGAAAAATTGGAAGAACTTAATGTTGGGGTGCCTGCGGAGAATAATGAATTTGTTAGCTTCAAATCTCGGATTGTTCCGTCTCTTCATCGGGGATGTGATGGGGTTACTCGGGACAGGGACAAAAATGAGAAGGTATTAGATTTTCAAGCTTGTATAGCTGAGAAGGATAAGGAAATATGTAGATTGAAGGAGTTTCTGGATACTGAAAAGAGAAGGGTTGATTCTAAGAGGAAGAGAGCTGCCGAAACTTGGAAGTTGCTGGAACAAGAAAAGAATAAGGGGGCACAGATTGCAAGAATTACAGCAGAGAAGACTGAGGGGTATAGGTTTCAAATTGATCAATTGGAGAAACAATGGAAAACCAAATACTTGAAAGCTCAAGAGTCGCGTAATGCTCTTCGCCAAGCTGTCAAGTTTCTCGAACACAAAGTCAATGAAACTGAAGCCCTGAATAACAATGCATGTGTTGTCAACATTGAAACTGGGGAAAAATCGGAAGAACTTAATGCTGCGGAGAATAATGAAGTCTGTAGCTTCAAGCCTCGGATTGTTACGTCTGTTCATCGGGGATGTGATGGGAATGCTCGAGATGGGGACGAGAATGAGAAGGTATTAGGTGTTCAAGCTTGTATAGCTGAGAAGGACAAGGAAATCTGTAGACTGAAGGAGCTTTTGgagattgaaaagaaaagggtGGATTCTAAGAGGAAGAAAGCTGCAGAAACTTGGAAGTTACTAGAACAAGAAAAGAATAAGGGGGCGCAGATTGAAAGAATTAAAGCGGAGAAGGCTGAGGGGTATAGGGTTCATATTGGTCAATTGGAGAAACAAGTTAGTGAAGCTAAACAGAAATTGAAATCGGAGGTGTCTGCATTCAAAGCGGCGACCAGAAGGTATGAATGTAAAAAGCGCATGATATTAGCAGAGAAAAGAAAAGCTGAGTTAGGGATGGCAAAAGCTAATGAAAAGTTGGAGGAGGTTGAAAAACACAAAGCCATTGAGATGGTTAAATTAGAAGATAACTGGAACAAGTTCTTGGAAGAAAAATGTCGCGCTGATCAGATGTCTCAGCAGCTAGAAGAGGGTAAGAGGACAATTGAGGATTTGAAGCGGAAGATGCATGAGCTCTCATCCCTGGGAAAACACACTGTAATGGATGCTGATATCAGTCTGAAAGCTCAAAGTAGTCAATGTTCTAAAGTGAACCATTTGAAAAACAATCTGACAGTTGAAAAGTTACGAGCAAAGTATACCAAGCAAAACTATAAGTTTGAAGCAAGTTGTTACAGTATGTTAGGACACAAATTAGGTAGTCTAAAGATTGGTTTCGTTCAGCTTCTACAACGCTTTGATGTACTAGATGCATCCTTTTTGCCTGTTTCAGGAAGCACACGTGACCAAACAAAGAAGTTTTTCGACGTGGATAATGTTGGTTTGGTGGTGACTGTTTTGAAGTCTCTAGTTATGTTACTCGAGGATGACAGCCTATCTGATGTTACTGCTCCTTGTCTTCCTTCGATAAACCAGCCACATACTGAATTTTGCACAAGTGTTAGTTGCCCGTTCTTAGAAGTCACTGAATCCATTAATGCAATTGCATGCTTGCTCTTAGAAGAGATAAAGAACTGTTTGCCTCAAGGGATGAACCAAGTTGATTTGTCAGATTCTGGATTAATGCCAGGCAATGATAATGTTGGACAACAGTCTAATTGGGATGTGGATCAATGTGCCACTAACAAGAATAATGTTGTGTCTGGTTGTTTGAGAAAGTGCTTGGTTTCTGATACTCGACCACATGCTCTTAAGAATGCCATCCTCTGTCACCTTAGTGATATCGTGTCATTGGTGGAACTGGTAGCAAACAAAATGAGCTGGCACTGGACTGATATCAAACTTGTTCCACAGCTGCTCAATATGCTTAACACTTGTGTAGAAGAGAAAATATCTGTTGCTATCGTTGTACTTCTCGGTCAACTTGGGAGGATTGGAGTTGATAGTGGTGGATATGAAGATCGAGGAGTTGAGAACCTGCGatATGCTATTGAAGAGTTTTTGGAACATAGGCCTATTCAGTTGAGATGGTGGCTTAAACTTGTTGCTTGGGAGACAAGGGTCCTATGGATTCTTTCTGGTGCATCTATTGTTGTCTACCTTTTCAATTACATGCTAAGTTTTGCTACCTTAATGTTTTGTGGACATTTGGGATCATTAGAGCTTGCTGGTGCATCTATAGCTAATGTTGGTATTCAAGGTCTTGCTTATGGAATTATGCTAGGGATGGCAAGTGCAGTACAAACTGTGTGTGGACAAGCTTATGGAGCCAAAAAATATGCAGTAATGTGCATCACATTGCAAAGAGCAGTAGTCTTACATTTTGGAGCGGCAGTGATTCTCACATTTCTTTACTGGTTCTCTGGAGATTTTCTAAGACTCATAGGACAGATAGATAGCATAGCCGAGCAAGGCCAAGTTTTCGCTCGTGGTCTTATTCCTCAACTCTATGCATTTGCATTGAGCTGTCCAATGCAAAGGTTTCTCCAAGCACAGAACGTTGTTAATCCTCTTGCATATATGGCAGTTGGAGTGTTCACTCTTCATGTGCTTCTTAGTTGGTTAGTTGTCTATGTTTTAGACTATGGACTTATTGGTGCAGCCTTTACTCTCAGCTTTTCTTGGTGGTGTCTTGTCTTGTTAAATGGACTGTACATCATTCTTAGCCCAAGATGCCGGGAAACTTGGACCGGCTTCAGTATGAAAGCATTCATAGGAATTTGGCCTTACTTTAAGCTCACAGCTGCTTCTGCTGTGATGTTATGCTTGGAGATATGGTACAGTCAGGGACTAGTACTCATATCAGGGCTGCTCTCCAATCCCACAGTGGCACTGGATTCTATTTCAATTTGCATGAATTACTTAAACTGGGATATGCAAATTATGTTGGGTCTTGGTGCAGCAGCCAGTGTGCGAGTTAGCAATGAATTAGGAGCAGCACATCCAAGAGTAGCGAAATTGTCTGTCTTCGTAGTGAATGGAAATAGCATCATAATTAGTGTAGTTCTTGCCGCGATCATTATGATATTCCGGGTTGCTTTGAGTGAGCTTTTCACTTCTAACTCTGTAGTACTTGAAGCTGTATCTAACTTGACACCATTGCTTGCCATCTCTGTCCTCTTAAATGGCATTCAACCTATATTATCAGGTGTTGCAGTTGGAAGTGGATGGCAAGCTTTGGTGGCATATGTGAACTTGGTCTGTTACTATGTCATTGGTCTTCCTGTTGGATGTGTTCTTGGTTTCAAAACTTCTTTAGGAGTAGCTGGTATCTGGTGGGGATTGATCCTTGGAGTTCTTATACAGACTGTTACACTAATAATTCTGACTGCCAGaacaaattgggaagcagaGGTTGAAAAAGCTATTGTTCGCGTCAAGAGGGCTTCTGAAGATGATACCTTGGATCAACTGGTTGCCGACGTATGA 3654 0.4042 MDSINTCCDQWKNKYLKAQQSRNALRQAVKFLEHKINEIHSHNNNNNNNVCVVKKESGEKLEELNVGVPAENNEFVSFKSRIVPSLHRGCDGVTRDRDKNEKVLDFQACIAEKDKEICRLKEFLDTEKRRVDSKRKRAAETWKLLEQEKNKGAQIARITAEKTEGYRFQIDQLEKQWKTKYLKAQESRNALRQAVKFLEHKVNETEALNNNACVVNIETGEKSEELNAAENNEVCSFKPRIVTSVHRGCDGNARDGDENEKVLGVQACIAEKDKEICRLKELLEIEKKRVDSKRKKAAETWKLLEQEKNKGAQIERIKAEKAEGYRVHIGQLEKQVSEAKQKLKSEVSAFKAATRRYECKKRMILAEKRKAELGMAKANEKLEEVEKHKAIEMVKLEDNWNKFLEEKCRADQMSQQLEEGKRTIEDLKRKMHELSSLGKHTVMDADISLKAQSSQCSKVNHLKNNLTVEKLRAKYTKQNYKFEASCYSMLGHKLGSLKIGFVQLLQRFDVLDASFLPVSGSTRDQTKKFFDVDNVGLVVTVLKSLVMLLEDDSLSDVTAPCLPSINQPHTEFCTSVSCPFLEVTESINAIACLLLEEIKNCLPQGMNQVDLSDSGLMPGNDNVGQQSNWDVDQCATNKNNVVSGCLRKCLVSDTRPHALKNAILCHLSDIVSLVELVANKMSWHWTDIKLVPQLLNMLNTCVEEKISVAIVVLLGQLGRIGVDSGGYEDRGVENLRYAIEEFLEHRPIQLRWWLKLVAWETRVLWILSGASIVVYLFNYMLSFATLMFCGHLGSLELAGASIANVGIQGLAYGIMLGMASAVQTVCGQAYGAKKYAVMCITLQRAVVLHFGAAVILTFLYWFSGDFLRLIGQIDSIAEQGQVFARGLIPQLYAFALSCPMQRFLQAQNVVNPLAYMAVGVFTLHVLLSWLVVYVLDYGLIGAAFTLSFSWWCLVLLNGLYIILSPRCRETWTGFSMKAFIGIWPYFKLTAASAVMLCLEIWYSQGLVLISGLLSNPTVALDSISICMNYLNWDMQIMLGLGAAASVRVSNELGAAHPRVAKLSVFVVNGNSIIISVVLAAIIMIFRVALSELFTSNSVVLEAVSNLTPLLAISVLLNGIQPILSGVAVGSGWQALVAYVNLVCYYVIGLPVGCVLGFKTSLGVAGIWWGLILGVLIQTVTLIILTARTNWEAEVEKAIVRVKRASEDDTLDQLVADV 1217
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu05g03673 1217 Coils Coil 181 208 - -
Tsu05g03673 1217 Coils Coil 1187 1207 - -
Tsu05g03673 1217 Coils Coil 322 349 - -
Tsu05g03673 1217 Pfam MatE 992 1152 IPR002528 GO:0015297|GO:0016020|GO:0042910|GO:0055085
Tsu05g03673 1217 Pfam MatE 771 930 IPR002528 GO:0015297|GO:0016020|GO:0042910|GO:0055085
Tsu05g03673 1217 Coils Coil 410 437 - -
Tsu05g03673 1217 Coils Coil 8 35 - -
Tsu05g03673 1217 CDD MATE_eukaryotic 760 1196 IPR045069 GO:0042910|GO:1990961
Tsu05g03673 1217 Coils Coil 368 399 - -
Tsu05g03673 1217 TIGRFAM matE: MATE efflux family protein 772 1167 IPR002528 GO:0015297|GO:0016020|GO:0042910|GO:0055085
Tsu05g03673 1217 PANTHER MULTIDRUG RESISTANCE PROTEIN 734 1201 - -
Tsu05g03673 1217 PANTHER PROTEIN DETOXIFICATION 41 734 1201 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tsu05g03673 Tsu-Chr5 48089335 48099219 Transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu05g03673 K03327 - mtr:MTR_5g090200 834.713
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tsu05g03673 05 48089335 48099219 Tsu03g01555 03 15398770 15412384 PCT