Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu05g03640 atgtTGAGAGTTTATCAATTAAGAAGAGTTGGATTGTTGATTCCAAAACTCTCTTCACTTTCAACAATTCCTTCAATCTTCTCTTTTCCTTCTCATTCTCACTCACAAATCCACActttttcatcaacaaaaacCATCCATCTTCACTCACATTCTTGTCTTACTCTTACACCATTTACTTCTCCAAAACAATCAGctTCATATAGTACTGTTGAAGGTGGTAGGGAAAGGGAAATATTGGTGCAACATTTGTTGGTGAAAGAAGATGATCAGAAACTATTGTTGGATCTTCAAAAGAGAATCTCTGCAGGTGAAAATTTGAAGGATCTTGCTGTGAACCATTCAATTTGCCCTTCTAAAGATGAAGGAGGAGTGCTTGGATGGGTGAGAAAGGGACAAATGGTTCCTGAACTTGAGGAGGCTGTGTTTACTGCACCTTTAAACAAAGTTGTAATGTGCAAGACAGAATTTGGATGGCACCTGCTGCAGGTTTTATCTGAAAGGGAAGAATCTGTATTTGAAGACATTCAACCTGACGAGCTGCATGTGAAACTTCAAGATCCCAGCTTCTCCGAGAAGGCACAGTTAATTGATATTCGAGAGCCTCAAGAAGTGGACAAAGCATCTTTGCCAGGATTTAAGGTTCTTTCCCTCCTACAATTTGGAACATGGGGGCCTGAGATAAACTCCAAATTTGATCTTCAAAAGGATACCTATATTCTGTGTCATCACGGCATACGGTCGCTACAGGTTGCCAGGTGGTTGCAGGCAAAGGGATTCAGGAAAGTATACAATATTTCTGGAGGAATCCATGCCTATGCAGAGAAGGTCAATCCTTCGGTTCCTACATACGCGAGAGAAAGTTTTGGTGAGAGGACCCCATTCAATATTTTAGCAGGTCACCCTTTCAAAACTGCCAACTTTTACTTGAGAGGCAAGGCATCCGATGGTCGCAAGTTACATATTGTCTTGGATATGCCAATTTGGAATTCTAAAGTTCTTTCTAAGGTCAAAGCTTTTGTTTTGACAGATTTACTCAATAATATTCGTACTGAATTACTGATGACTTGTGTTGCAAGTTACGCGCCTCGTGTGTGTCATGTGTAG 1107 0.3984 MLRVYQLRRVGLLIPKLSSLSTIPSIFSFPSHSHSQIHTFSSTKTIHLHSHSCLTLTPFTSPKQSASYSTVEGGREREILVQHLLVKEDDQKLLLDLQKRISAGENLKDLAVNHSICPSKDEGGVLGWVRKGQMVPELEEAVFTAPLNKVVMCKTEFGWHLLQVLSEREESVFEDIQPDELHVKLQDPSFSEKAQLIDIREPQEVDKASLPGFKVLSLLQFGTWGPEINSKFDLQKDTYILCHHGIRSLQVARWLQAKGFRKVYNISGGIHAYAEKVNPSVPTYARESFGERTPFNILAGHPFKTANFYLRGKASDGRKLHIVLDMPIWNSKVLSKVKAFVLTDLLNNIRTELLMTCVASYAPRVCHV 368
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu05g03640 368 Gene3D - 170 311 IPR036873 -
Tsu05g03640 368 SUPERFAMILY FKBP-like 77 165 - -
Tsu05g03640 368 ProSiteProfiles Rhodanese domain profile. 190 282 IPR001763 -
Tsu05g03640 368 Pfam Rhodanese-like domain 191 275 IPR001763 -
Tsu05g03640 368 Gene3D - 74 169 IPR046357 GO:0003755
Tsu05g03640 368 SUPERFAMILY Rhodanese/Cell cycle control phosphatase 171 284 IPR036873 -
Tsu05g03640 368 PANTHER PEPTIDYL-PROLYL CIS-TRANS ISOMERASE 9 284 - -
Tsu05g03640 368 SMART rhod_4 176 279 IPR001763 -
Tsu05g03640 368 Pfam PPIC-type PPIASE domain 83 166 - -
Tsu05g03640 368 ProSiteProfiles PpiC-type peptidyl-prolyl cis-trans isomerase family profile. 76 166 IPR000297 GO:0003755
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tsu05g03640 Tsu-Chr5 47731276 47734717 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tsu05g03640 77 284 Sulfurtransferasese or Rhodanese AT5G19370 63.462 1.17e-94 283
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu05g03640 - - mtr:MTR_5g089330 462.611
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tsu05g03640 05 47731276 47734717 Tsu05g03640 05 47731276 47734717 ECH