Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu05g03638 ATGTTGAGAGTTTCTCAATTTCGTGTTGgatttgcgattccaaaactctCTCCACTTTCATCAATTCCTTcactcttctctttctcttttccTTCTCATTCTCACTCTCAAATCCACACTTTTTCTTCCACAAAAACCTTCCATTTTCACTCaccttcttctcttcctctttCACCCTTTACTTCAATCATGCCTCTAAAAGCATCAGctTCATATAGTAGTGGTGTTGAAGGTGGAGGAGAAAGGGAAATATTGGTGCAGCATCTGTTGGTGAAAGAAGATGACCAGAAACTATTGTTGGATATTCAAAAGAGAGTTGCTGCAGGTGAAGATTTGAGCGATCTTGCCGTGGACCATTCAATTTGCCCATCTAAAGATGAAGGAGGAATGCTTGGGTGGGTGAGAAAGGGACAAATGGTTCCTGAATTTGAGGAGGCTGCATTTGGTGCACCTTTAAACAAAGTTGTAAGGTGCAAGACTAAATTTGGATGGCACCTGCTGCAGGTTTTATCTGAAAGGGAAGAATCAGTACTTCAAGACATTAAACCGGATGAGCTGCATGTGAAATTTCAAGATCCCAACTTTTCGGAGGAGGCACAGTTAATTGATGTTCGAGAGCCTGAAGAAGTGGAAATAGCATCTTTGCCAGGATTTACAGTTCTTCCCCTCCGGCAATTTGGAAGCTGGGGGCCTGAAGTAAACACCAAATTCGACCCTCAAAAGGATACATATGTTCTGTGTCATCACGGCGTGCGGTCGTTACAGGTTGCCAGGTGGTTGCAGTCACAGGGGTTCCGGAAAGTATACAATATTTCTGGAGGAATCCATGCCTATGCAGTTCAGGTCGATCCATCAGTTCCTACATACTGA 870 0.4034 MLRVSQFRVGFAIPKLSPLSSIPSLFSFSFPSHSHSQIHTFSSTKTFHFHSPSSLPLSPFTSIMPLKASASYSSGVEGGGEREILVQHLLVKEDDQKLLLDIQKRVAAGEDLSDLAVDHSICPSKDEGGMLGWVRKGQMVPEFEEAAFGAPLNKVVRCKTKFGWHLLQVLSEREESVLQDIKPDELHVKFQDPNFSEEAQLIDVREPEEVEIASLPGFTVLPLRQFGSWGPEVNTKFDPQKDTYVLCHHGVRSLQVARWLQSQGFRKVYNISGGIHAYAVQVDPSVPTY 289
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu05g03638 289 Gene3D - 175 286 IPR036873 -
Tsu05g03638 289 ProSiteProfiles PpiC-type peptidyl-prolyl cis-trans isomerase family profile. 81 171 IPR000297 GO:0003755
Tsu05g03638 289 Pfam PPIC-type PPIASE domain 92 171 - -
Tsu05g03638 289 CDD RHOD_2 180 283 - -
Tsu05g03638 289 Pfam Rhodanese-like domain 194 279 IPR001763 -
Tsu05g03638 289 Gene3D - 79 174 IPR046357 GO:0003755
Tsu05g03638 289 SMART rhod_4 181 284 IPR001763 -
Tsu05g03638 289 SUPERFAMILY Rhodanese/Cell cycle control phosphatase 177 287 IPR036873 -
Tsu05g03638 289 ProSiteProfiles Rhodanese domain profile. 195 287 IPR001763 -
Tsu05g03638 289 PANTHER PEPTIDYL-PROLYL CIS-TRANS ISOMERASE 1 289 - -
Tsu05g03638 289 SUPERFAMILY FKBP-like 82 170 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tsu05g03638 Tsu-Chr5 47714045 47718229 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tsu05g03638 82 289 Sulfurtransferasese or Rhodanese AT5G19370 67.308 4.37e-104 303
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu05g03638 - - mtr:MTR_5g089330 465.692