Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu05g03617 ATGGAACAGAGAagaaattcatcatcatcatcatggtTTCTTCTATTCTCAATTCTTTCTTGTCTTTTTCTCTCTAATTTCTTAGGATCTGTTAGAGCTTACAAAAATTACACAGTTGGAGATTCTTTAGGTTGGTTTGACAATCTTGAAAAGCCTACTGTTAATTACCAGAAGTGGGTTGCCAAGAAAGAATTCAGCTTGGGAGATTTCCTCATTTTCAACACAGACAATAACCACTCTCTTGTACAAACATACAACTTCACCACATACAAACTATGTGATTATGATGATGCACAAGACAAAGACATAGTCCAATGGTCATATGCTGATCCGTCGAACACCGGGATACAACCGGTGACAGTAGCGGTTCCTTTACTCAAGGAAGGTCCGACATATTTCTTCTCGAGTGATTATGATGGCGAACAATGCAAAAATGGACAACATTTTAACATAAACGTGACTCATGGACAAGGGTTGCCTAAGAGTCTTCGACCCTCCGATGATGCTCAATCTCCTATTAGTCCAATTTCCGGTGATGACGAGTCAGCACCAGACACAAATGTTCCTTCCAATTTCAATCATCCTAAAGAAGACAAAGACGATGAAAAAAGTACTGACAACGATGACAAAGATAACGAGAAATCAAATTCGGATTCAGTGTTAAAGTATGCACAACTTCACAACAAGTTGTATGGGTCTCTTGTCTTGTTAGggacatttttcttatttaattag 735 0.3646 MEQRRNSSSSSWFLLFSILSCLFLSNFLGSVRAYKNYTVGDSLGWFDNLEKPTVNYQKWVAKKEFSLGDFLIFNTDNNHSLVQTYNFTTYKLCDYDDAQDKDIVQWSYADPSNTGIQPVTVAVPLLKEGPTYFFSSDYDGEQCKNGQHFNINVTHGQGLPKSLRPSDDAQSPISPISGDDESAPDTNVPSNFNHPKEDKDDEKSTDNDDKDNEKSNSDSVLKYAQLHNKLYGSLVLLGTFFLFN 244
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu05g03617 244 Gene3D - 34 158 IPR008972 -
Tsu05g03617 244 PANTHER BNAA08G26900D PROTEIN 7 224 - -
Tsu05g03617 244 MobiDBLite consensus disorder prediction 167 191 - -
Tsu05g03617 244 ProSiteProfiles Phytocyanin domain profile. 35 155 IPR003245 GO:0009055
Tsu05g03617 244 MobiDBLite consensus disorder prediction 192 217 - -
Tsu05g03617 244 MobiDBLite consensus disorder prediction 154 217 - -
Tsu05g03617 244 Pfam Plastocyanin-like domain 45 147 IPR003245 GO:0009055
Tsu05g03617 244 PANTHER BLUE COPPER PROTEIN 7 224 IPR039391 GO:0009055
Tsu05g03617 244 SUPERFAMILY Cupredoxins 35 153 IPR008972 -
Tsu05g03617 244 ProSiteProfiles Prokaryotic membrane lipoprotein lipid attachment site profile. 1 21 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tsu05g03617 Tsu-Chr5 47530504 47532730 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tsu05g03617 18 203 Phytocyanin Superfamily AT1G08500 62.304 4.15e-78 233
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu05g03617 - - ccaj:109789262 300.827
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tsu05g03617 05 47530504 47532730 Tsu05g03617 05 47530504 47532730 ECH