Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu05g03594 ATGGGAAATTGTTTCAGAAAACCAGTTTGTCATGTTTCTTCCACAACTTTATTTGGAACTACAAAGACTCAAAGTAAGACAAAGCAAATTTCCAATTCTCCGGACCAAAAAACCGATTTGAAAACTTCAGAAACAAATGATGATGTATCCATCTCCAATAATGTTAAGTCTTTCAGCTTCAATGATCTAAAAGAGGCGACTAGGAACTTCCGGCAAGAAAATTTAATCGGCGAAGGAGGGTTTGGATTTGTCTTCAAAGGATGGATAGATGAGAACACCGGCGCTCCTACAAAACCAGGAAATGGAATTGTAGTTGCCATTAAGCGGCTTAAACCGGAAAGTTTTCAAGGTCACAAGGAATGGCTTGCAGAAGTAAATTATCTAGGCCAACTTCACCATGAAAATTTGGTGAGACTTATTGGTTACTGTTCAGAAGGAAAAAACAGGCTTCTAGTTTATGAGTTTATGCAGAAAGGAAGTttggaaaatcacttattcAGAAAAGGTGTTCAACCGATTTCCTGGATGACACGGATTAATATTGCGATTGGTGTAGCAAGAGGACTAGCATTCTTACACTCCCTTGATGCAAATGTTATTTATCGCGATTTAAAGGCTTCCAACATCCTACTTGATTCGGACTTCAATGCAAATCTTTCGGATTTCGGCTTAGCAAGAGATGGTCCAACCGGAGATAACACTCATGTTTCAACTCGAGTTATCGGAACTCATGGTTATGCCGCACCAGAATATGTAGCCACAGGTACATTTTTCATTTGCCTTACCGATTTTTACTTTTTTCGGTTATGTCCAAGTTTTCTAAATGTGTTGAGCCTAAACAGGTCATTTAACACCAAGGAGCGATGTGTACAGCTTCGGCGTTGTCTTGTTAGAGTTACTAACAGGAAAGCGTGTGGTTGA 921 0.3887 MGNCFRKPVCHVSSTTLFGTTKTQSKTKQISNSPDQKTDLKTSETNDDVSISNNVKSFSFNDLKEATRNFRQENLIGEGGFGFVFKGWIDENTGAPTKPGNGIVVAIKRLKPESFQGHKEWLAEVNYLGQLHHENLVRLIGYCSEGKNRLLVYEFMQKGSLENHLFRKGVQPISWMTRINIAIGVARGLAFLHSLDANVIYRDLKASNILLDSDFNANLSDFGLARDGPTGDNTHVSTRVIGTHGYAAPEYVATGTFFICLTDFYFFRLCPSFLNVLSLNRSFNTKERCVQLRRCLVRVTNRKACG 306
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu05g03594 306 Pfam Protein tyrosine and serine/threonine kinase 73 267 IPR001245 GO:0004672|GO:0006468
Tsu05g03594 306 Gene3D Phosphorylase Kinase; domain 1 44 155 - -
Tsu05g03594 306 Gene3D Transferase(Phosphotransferase) domain 1 156 291 - -
Tsu05g03594 306 ProSitePatterns Protein kinases ATP-binding region signature. 76 108 IPR017441 GO:0005524
Tsu05g03594 306 SUPERFAMILY Protein kinase-like (PK-like) 45 257 IPR011009 -
Tsu05g03594 306 ProSitePatterns Serine/Threonine protein kinases active-site signature. 199 211 IPR008271 GO:0004672|GO:0006468
Tsu05g03594 306 PANTHER TYROSINE KINASE FAMILY PROTEIN 17 269 - -
Tsu05g03594 306 ProSiteProfiles Protein kinase domain profile. 70 306 IPR000719 GO:0004672|GO:0005524|GO:0006468
Tsu05g03594 306 SMART serkin_6 70 306 IPR000719 GO:0004672|GO:0005524|GO:0006468
Tsu05g03594 306 MobiDBLite consensus disorder prediction 21 48 - -
Tsu05g03594 306 PANTHER OS01G0588500 PROTEIN-RELATED 17 269 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tsu05g03594 Tsu-Chr5 47375486 47378378 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tsu05g03594 46 285 Glycoside Hydrolase AT3G07070 49.796 3.69e-74 232
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_RLCK-VIIa-2 Tsu05g03594 PK_Tyr_Ser-Thr 2.5e-36 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu05g03594 - - gmx:102664409 438.343