Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu05g03578 ATGGGGATTCAAACAATGGGTTCTCAAAGTAATGGGCAACAGTCTCATTTACAGGCTAATAATCAGTTAATTAAGCAAAATTCATGGTATGGTCTTACTCTTGATGAGGTTAACAATCTACTCGGAGATTTAGGAAAGCCGTTAGGGAGCATGAATCTCGACGAGCTTCTTCAGAATGTATGGACTGCTGAAGGAAATAACATTGTAGGGGTAGAGAGTGAGCATGTTTCGTCTTCGTCTTCTCTTCAACGTCAGGCTAGTATGACGTTGGCTCGTGCTTTAAGTGGGAAAACGGTGGATGATGTATGGAGAGAAATCCAGCTAGGTCAGAAGAAACAATACGGAGATGATGTGAAAATTGAGGATAGGGAAATGAGTCTTGGTGGTACAACGTTGGAAGATTTTTTAGTACAAGCGGGGCTTTACGCTGGTGCTTCAGTTAGTCCGATGGTGGGTTTGGATGCAATGGATACTGCTATTCCTCAAAGCGTTCAACCGAAAACAAGTTTGTTATCCTCTTCTTCGATTAGTAGTTTGTCAGATGCAAAACCGGGTCGTAAAAGGGATGGACCGGATGCGTATGAGAAGGCTCTAGAAAGGAGGCTGAGAAGGAAAATCAAGAATAGGGAATCTGCTGCTCGTTCACGAGCAAGAAAACAGGCTTACCACAATGAACTGGTTACCAAGGTTACTCTTCTAGAACAGCAAAATACGCAGCTCAAGAAAGAGAAGGAGTTTGAGCAGGCGCTACCACTTGAACCATCAGCTGAACCGAAATATCGTCTTCGAAGAATAAGTTCTGCCCTTTTCTGA 813 0.433 MGIQTMGSQSNGQQSHLQANNQLIKQNSWYGLTLDEVNNLLGDLGKPLGSMNLDELLQNVWTAEGNNIVGVESEHVSSSSSLQRQASMTLARALSGKTVDDVWREIQLGQKKQYGDDVKIEDREMSLGGTTLEDFLVQAGLYAGASVSPMVGLDAMDTAIPQSVQPKTSLLSSSSISSLSDAKPGRKRDGPDAYEKALERRLRRKIKNRESAARSRARKQAYHNELVTKVTLLEQQNTQLKKEKEFEQALPLEPSAEPKYRLRRISSALF 270
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu05g03578 270 MobiDBLite consensus disorder prediction 164 181 - -
Tsu05g03578 270 CDD bZIP_plant_BZIP46 200 249 - -
Tsu05g03578 270 Gene3D - 198 250 - -
Tsu05g03578 270 Coils Coil 223 250 - -
Tsu05g03578 270 Pfam bZIP transcription factor 200 244 IPR004827 GO:0003700|GO:0006355
Tsu05g03578 270 PANTHER CAMP-RESPONSE ELEMENT BINDING PROTEIN-RELATED 37 267 IPR043452 GO:0003700|GO:0045893
Tsu05g03578 270 SUPERFAMILY Leucine zipper domain 200 246 IPR046347 GO:0003700|GO:0006355
Tsu05g03578 270 MobiDBLite consensus disorder prediction 164 194 - -
Tsu05g03578 270 ProSiteProfiles Basic-leucine zipper (bZIP) domain profile. 198 243 IPR004827 GO:0003700|GO:0006355
Tsu05g03578 270 PANTHER BZIP TRANSCRIPTION FACTOR 37 267 - -
Tsu05g03578 270 SMART brlzneu 196 268 IPR004827 GO:0003700|GO:0006355
Tsu05g03578 270 ProSitePatterns Basic-leucine zipper (bZIP) domain signature. 203 218 IPR004827 GO:0003700|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tsu05g03578 Tsu-Chr5 47258290 47260363 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tsu05g03578 18 270 bZIP Transcription Factor Family AT3G56850 42.414 1.94e-55 179
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bZIP Tsu05g03578 bZIP_1 7.9e-12 CL0018
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu05g03578 K14432 - gmx:100798549 369.777
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tsu05g03578 05 47258290 47260363 Tsu05g03578 05 47258290 47260363 ECH