Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu05g03573 atggaggttttaagttttacaaaaaatatgttgttgatgatgatgatgagtgcTATGATGTGTCACATGGTAAAATCTAAGGAACACTTTGTTGGAGGGAGTGAGTTTGGATGGGTACCACTACCTGCTAATAACTTGACCAATTGGTCATTGAATGAGCACTTTCACTTGAATGATTGGCTATACTTTGGATATGACAGACGCTATTTCAATGTGCTAGAGGTGAACAAAACAAGTTATGAAAACTGCATAGATGCCGGATTCTTAAAGAACGTAAGCGGAGGCGCCGGACGAGACGTTTTTCAGCTGACAAAGGAGAAGACTTATTACTTTCTAAGTGGAGGAGGTTACTGTCGGCGAGGGTTGAAGGTTGCCATTGATGTTAATGATTATGTTGCACCAGCTCCTGCACCTACACCTCACAAAAGTGGTGCTTCTGCTTTAGATGCTTATAATATCTACCATTCACTTGTGGTGCTCATCTTAATCTTGATGTGCAGCAACTTCTTGGGATAA 516 0.376 MEVLSFTKNMLLMMMMSAMMCHMVKSKEHFVGGSEFGWVPLPANNLTNWSLNEHFHLNDWLYFGYDRRYFNVLEVNKTSYENCIDAGFLKNVSGGAGRDVFQLTKEKTYYFLSGGGYCRRGLKVAIDVNDYVAPAPAPTPHKSGASALDAYNIYHSLVVLILILMCSNFLG 171
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu05g03573 171 Pfam Plastocyanin-like domain 43 121 IPR003245 GO:0009055
Tsu05g03573 171 PANTHER BLUE COPPER PROTEIN 10 164 IPR039391 GO:0009055
Tsu05g03573 171 PANTHER OS03G0758500 PROTEIN 10 164 - -
Tsu05g03573 171 Gene3D - 26 132 IPR008972 -
Tsu05g03573 171 ProSiteProfiles Phytocyanin domain profile. 27 130 IPR003245 GO:0009055
Tsu05g03573 171 SUPERFAMILY Cupredoxins 26 128 IPR008972 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tsu05g03573 Tsu-Chr5 47222098 47223319 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tsu05g03573 10 160 Phytocyanin Superfamily AT2G27035 37.748 7.12e-32 110
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu05g03573 - - mtr:MTR_5g088180 225.328