Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu05g03562 ATGCAGGCTATCTGGTTGATGCTGTTGTTGGTGGTGAATATTGCATTAGGGAATTCAGATATTGATGCACTTCTTGAACTCAAGAAGGGTATTAAAAATGACCCTTTTGGATTAGTTCTTAATTCTTGGGATTCAAAGTCATTAGACTCTGATCAATGTCCACAAAACTGGTATGGAATATTATGTAGTGAAGGCAATGTTTTATCTATCACTTTGGACAATGCTGGTTTGGTTGGAGAGTTTAATTTCCTTGCAATTAGTACCCTTACAATGCTTCACAACTTGTCACTTGTAAACAACAATTTCTCAGGAAGTATGTTACATATTAGTCCGATGAAATCACTTAAATATCTCGATTTGTCTCTCAACAAGCTCACCGGCTCACTTCCTCCTAGCTTCGTCGAATTGAGTAGTTTAGTGTATCTGAATCTTTCTTCAAATGAATTTAGTGGCACTATTCCGAACGTGTTTCACAAACTTGACCAGTTGATGTATTTAGATTTTCACGGTAATAGCTTTTCAGGCGATATTATGGATATATTTTATCAGATGGGAAGTGTGTTACATGTTGACTTAAGCAACAACAGGTTTTCTGGTACACTTGATTTGGGACTTGGAGATGTTTCATTTCTATCTTCAATTCAACATTTGAATGTTAGTCATAATTCCTTGGTTGGTGAACTATTTGCTCATGATGGTATGCCATACCTTGATAATTTAGAGATCTTTGATGCTACTAATAATCAGCTAGTTGGTCGTATACCTTCCTTCACATTTGTTGTATCGCTAAGGATTCTTCGACTTGCATGCAATCAGTTGACAGGTTCTCTGCCAGAAGCTTTGTTGAAGGAAAGTTCAATGGTGTTGTCTGAACTCGATCTTAGTCAAAACAAGCTTGAAGGTTTCATCGGAAGCATTACCTCAATGACTCTCAGGAAGCTTaatatatcttcaaacaaatTGTCAGGTCCAATACCTCTCAAAGTAGGTCACTGTGCCATCATAGATTTGAGTAACAATGTGCTGTCAGGTAACATGTCAAGGATCAAGTATTGGGGGAACTATGTGGAAGTTATTCAGCTAAGTACTAACTTTTTGTCCGGAACTCTGCCAAACGAAACAACGCAATTTTTAAGGTTAACTTCACTTAAGGTATCCAATAACTCATTGGAGGGATTTCTGCCACCTGTTTTAGGAACATATCCGGAACTAAAAGAGATCGATCTTAGTCTCAACCGGCTTTCTGGTTTCCTCCTACCAACCCTTTTCGTCTCAACCAAATTGAGTACTCTTAATCTCTCATACAATGAGTTTTCTGGTCCAATTCCTTTTCAACTTCCAAATAATAATTCATTGGTTTCTTCCGAAAATTTCAGTTTGACGGCTCTTGATCTTTCAAACAACAACTTGAGTGGAACTCTTTCTTCAAAAATTATCGAGCTTCATAATTTGGCATATCTCAATCTATGTAACAACAAATTGGAAGGTACTATTCCTAACAATCTTCCAGATGAATTAAGAGGATTCAATGTgtcctttaataatttttctgGCGCTGTACCTCATAACTTATTGAAGTTTCCCGAGTCAGCATTTCATCCAGGAAATACTATGCTGCTATATCCAAATTCTCAATTATCACCAAAAGATAATTCAATCTTAGGTTTGAGGTCACACAAGAAATATTTTCCTAGGAGTGTCTGGATTACATGTTTGGTTACCGGCATTTTTGTGATTGCTATTATGGCTGCAATGATTTATTATAGGATTCatcagaaaaaagaaagaacttCTAAACAAGATGCAACAACAAGTGACATCGTCCAAGAGAGTACTTCTCCATCAAACAGAAGAAATTTGGAATCATTACCGCCTTCTCAAAGTGATGATACCGGAAACATTAATCCAACCTTAATGAAGGCTAAAGATCCTGAATTAGTTAAGAACGAGGAAGGAACGTcttctccaatgtctattttaTCGGCTTCGAATCCTTCACCTTCTACAAGTCATCAGTTCGAGAATCCAAGCTCCCTTAAAGTATCATCTCCGGATAAACTGGTTGGTGACTTGCATCTATTTGATGGATCATTGATGCTAACTGCGGAAGAACTTTCGTGTGCTCCAGCTGAAGTTATTGGTAGGAGTTGTCATGGAACACTCTACAAAGCTACACTTGAATCTGGTCATGTTTTGGCTGTTAAATGGTTAAGAGAAGGAATAACGAAAGGAAAAAAGGAGTTAGCGAGGGAAATTAAGAAACTTGGGACAATCAAGCATCCAAGCTTGGTTTCTCTTCTTGGTTGCTACTTAGGGCCAAAGGAGCATGAGAGACTGATTATATCAAATTACATGAATGCATATTCTTTGGACATTTATCTCCATGAAGCTGATAAAAGAAATCTCCATCCTTTGTCTGTTGATGAAAGGCTCAGGGTGGCCGTAGAAGTGGCTCGATGTTTACTTTATCTGCATACCGAGAAAGCCATACCTCATGGCAATCTCAAATCCACAAACATTCTAATAGAAACTCCCAACAGAAATGTCTTGCTCACTGATTACAGCCTGCACCGGATACTCACCGCTGCTGGTACTTCCGAGCAAATTCTGAATGCCGGTGCACTTGGTTACCGACCTCCTGAGTTTGCTAGATCAACCAAACCATGCCCTTCCTTAAAAAGTGATGTCTATGCATTCGGAGTTGTTTTGTTAGAGCTCTTATCAGGAAGAAAATCCGGAGAAATTGTTTCCGGGATTTCTGGCGTGGTTGAACTTACCGAATGGGTGAGATTCTTAGCTGAACAAGGCCGCTCTAACCAATGCTTCGAAAAATCCCTCGTGGAAAATCACAACGGAGAAGGACCATTTATGATTCTTGAAAACATGCTAAAAGTAGCTCTTAGATGCATCCTTCCAGCATCTGAGAGACCTGATATGAAAACAGTCTTTGATGATCTTTCAACAATAAGGGAGAGTTGA 2979 0.379 MQAIWLMLLLVVNIALGNSDIDALLELKKGIKNDPFGLVLNSWDSKSLDSDQCPQNWYGILCSEGNVLSITLDNAGLVGEFNFLAISTLTMLHNLSLVNNNFSGSMLHISPMKSLKYLDLSLNKLTGSLPPSFVELSSLVYLNLSSNEFSGTIPNVFHKLDQLMYLDFHGNSFSGDIMDIFYQMGSVLHVDLSNNRFSGTLDLGLGDVSFLSSIQHLNVSHNSLVGELFAHDGMPYLDNLEIFDATNNQLVGRIPSFTFVVSLRILRLACNQLTGSLPEALLKESSMVLSELDLSQNKLEGFIGSITSMTLRKLNISSNKLSGPIPLKVGHCAIIDLSNNVLSGNMSRIKYWGNYVEVIQLSTNFLSGTLPNETTQFLRLTSLKVSNNSLEGFLPPVLGTYPELKEIDLSLNRLSGFLLPTLFVSTKLSTLNLSYNEFSGPIPFQLPNNNSLVSSENFSLTALDLSNNNLSGTLSSKIIELHNLAYLNLCNNKLEGTIPNNLPDELRGFNVSFNNFSGAVPHNLLKFPESAFHPGNTMLLYPNSQLSPKDNSILGLRSHKKYFPRSVWITCLVTGIFVIAIMAAMIYYRIHQKKERTSKQDATTSDIVQESTSPSNRRNLESLPPSQSDDTGNINPTLMKAKDPELVKNEEGTSSPMSILSASNPSPSTSHQFENPSSLKVSSPDKLVGDLHLFDGSLMLTAEELSCAPAEVIGRSCHGTLYKATLESGHVLAVKWLREGITKGKKELAREIKKLGTIKHPSLVSLLGCYLGPKEHERLIISNYMNAYSLDIYLHEADKRNLHPLSVDERLRVAVEVARCLLYLHTEKAIPHGNLKSTNILIETPNRNVLLTDYSLHRILTAAGTSEQILNAGALGYRPPEFARSTKPCPSLKSDVYAFGVVLLELLSGRKSGEIVSGISGVVELTEWVRFLAEQGRSNQCFEKSLVENHNGEGPFMILENMLKVALRCILPASERPDMKTVFDDLSTIRES 992
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu05g03562 992 MobiDBLite consensus disorder prediction 594 681 - -
Tsu05g03562 992 PANTHER OS07G0626500 PROTEIN 1 990 - -
Tsu05g03562 992 SUPERFAMILY Protein kinase-like (PK-like) 710 986 IPR011009 -
Tsu05g03562 992 MobiDBLite consensus disorder prediction 651 681 - -
Tsu05g03562 992 Pfam Protein tyrosine and serine/threonine kinase 711 984 IPR001245 GO:0004672|GO:0006468
Tsu05g03562 992 Gene3D Ribonuclease Inhibitor 183 353 IPR032675 -
Tsu05g03562 992 PRINTS Leucine-rich repeat signature 481 494 - -
Tsu05g03562 992 PRINTS Leucine-rich repeat signature 460 473 - -
Tsu05g03562 992 SUPERFAMILY L domain-like 41 340 - -
Tsu05g03562 992 Gene3D Ribonuclease Inhibitor 457 545 IPR032675 -
Tsu05g03562 992 Gene3D Ribonuclease Inhibitor 354 456 IPR032675 -
Tsu05g03562 992 Gene3D Ribonuclease Inhibitor 17 182 IPR032675 -
Tsu05g03562 992 PANTHER LEUCINE-RICH REPEAT PROTEIN KINASE FAMILY PROTEIN 1 990 - -
Tsu05g03562 992 Gene3D Transferase(Phosphotransferase) domain 1 785 992 - -
Tsu05g03562 992 SUPERFAMILY L domain-like 335 527 - -
Tsu05g03562 992 Pfam Leucine rich repeat 92 148 IPR001611 GO:0005515
Tsu05g03562 992 Gene3D Phosphorylase Kinase; domain 1 705 784 - -
Tsu05g03562 992 Pfam Leucine rich repeat N-terminal domain 18 63 IPR013210 -
Tsu05g03562 992 Pfam Leucine Rich repeat 308 323 IPR001611 GO:0005515
Tsu05g03562 992 Pfam Leucine Rich repeat 457 472 IPR001611 GO:0005515
Tsu05g03562 992 MobiDBLite consensus disorder prediction 602 635 - -
Tsu05g03562 992 ProSiteProfiles Protein kinase domain profile. 707 989 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tsu05g03562 Tsu-Chr5 47139963 47145186 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tsu05g03562 69 989 Receptor kinase-like Gene Family AT5G07280 29.796 9.14e-78 275
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-III Tsu05g03562 PK_Tyr_Ser-Thr 7.4e-29 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu05g03562 - - cam:101512473 1553.11
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tsu05g03562 05 47139963 47145186 Tsu05g03562 05 47139963 47145186 ECH