Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu05g03545 ATGCGTCCACCAATGAAGAAAATTGATTACAAAGTTGGGGACAAAGTAGAAGTATGCAGCAAAGAAGAAGGATTTGTGGGTTCATACTATGAAGCTACAATTGTTTCATGTCTTGATAATGGAAAATACGTGATTTGCTATAAGAATCTTCTTAAAGATGACGAGTCTGAATTTCTCACTGAAACACTTCTTCCAAAAGATTTTCGTCCATCACCGCCACGTGTTCGTAATCCTTTAAAGTTTCGACTCAATCAAAAAGTGGATGTTTTTGATAATGATGGTTGGTGGGTAGGGAAAATCATAAGTGAAAAGATCTTCATGGAAAATAGTTATTACTATAATGTGTATTTTGACTACACTCATCAGTCCATTTACTATCGTTGTGATAAAATTAGGGTTCATCATGAGATGATGTTTAGTGGAGAGTGGATGATGGAAGCTTAA 444 0.3514 MRPPMKKIDYKVGDKVEVCSKEEGFVGSYYEATIVSCLDNGKYVICYKNLLKDDESEFLTETLLPKDFRPSPPRVRNPLKFRLNQKVDVFDNDGWWVGKIISEKIFMENSYYYNVYFDYTHQSIYYRCDKIRVHHEMMFSGEWMMEA 147
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu05g03545 147 Pfam Agenet domain 13 73 IPR008395 -
Tsu05g03545 147 PANTHER - 8 145 - -
Tsu05g03545 147 SMART agenet_At_2 79 139 IPR014002 -
Tsu05g03545 147 SMART agenet_At_2 8 76 IPR014002 -
Tsu05g03545 147 PANTHER AGENET DOMAIN-CONTAINING PROTEIN-RELATED 8 145 - -
Tsu05g03545 147 Gene3D - 4 63 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tsu05g03545 Tsu-Chr5 46997088 46997531 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tsu05g03545 20 98 PHD Transcription Factor Family AT5G58610 33.673 2.21e-07 47.4
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu05g03545 - - mtr:MTR_4g079980 227.254