Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu05g03526 ATGACTAGATATAGCTGTAGCAGTAAAATTATTACACTCTTGTTGtttattatttcctttttgcACGGTGCTTCTCCTCTTACCTCTGATGGGTTGACTTTGTTGTCACTCTTGACACATTGGACCTTTGTTCCTCCTCTCATCAACTCTAGCTGGAAGGCTTCTGATTCCAGTCCATGCTCATGGGTTGGTGTCCAATGTGACCATACCAATAATTTGATTTCCCTTAACCTTACTAGTTATGGGATTTTTGGTCAACTTGGACCAGAAATCGGAAACCTTTATCACTTGCAGACCCTTATGTTGTTAGGTAATGGCTTCTCAGGAAAACTGCCTTTAGAGTTAAGCAACTGTAGTTTTCTAGAGAACTTAGACCTCTCTAGTAACAGATTCAGTGGAAAGATACCGTATAGTTTGAAAAACTTACAAAATTTACAGTTTATGAGATTGTCTTCCAATCTGCTGACTGGTGAaattccagactccttgtttcAAATTCCTTTGCTTGAAGAAGTGAGCTTACACAGAAACCAACTTAGTGGTCCTATTCCAACAAATATTGGAAACTTGACAAATCTATTAAGGTTGTATCTATATGCTAATCAGTTGTCAGGGACTATTCCTTCATCTCTTGGTAATTGCAGTAAACTAGAGGATCTTGAATTGTCTTTCAACCATTTGAGAGGCGAAATTCCGATAAGTATTTGGAGAATTTCAAGTCTTGTGAATATAATGGTTCAGAATAACAGCCTCTCTGGGGAGCTACCTTTCGAGATGACAAAGCTCAGGTATCTAAAAAATATCTCATTGTTTGACAATCAATTCTCAGGAGTAATACCTCAAAGTTTAGGCATCAACAGCAGCATAGTGAAGTTGGACTGTATGAATAACAAGTTCAGTGGAAATATCCCACCAAATATTTGCTTTGGAAAGCATTTGTTAGTGCTCAACATGGGAATCAATCAACTTGAAGGTGGCATACCTTCTGATGTAGGAAGATGTGCAACTCTGGTGAGGTTGTTTCTCAATGATAATAATTTCTCCGGGTTTCTTCCTGATTTTGTAAGTAATCTGAACCTGAAATACATGGACATGAGCAAGAACAATATCAGTGGACCGATTCCATCAAGTTTGGAAAATAGCACAAATCTCACATacattaatttgtcaaaaaacaaattcgCAGGGCTTATACCAGCAGAGCTTGGAAACCTTGTGAATCTTGTGATTTTGGATGTTGCTCACAACAATTTGGAGGGTCCTTTGCCATTTTGGCTGTCAAACTGTAACAAAATGGACCGTTTTGATGTGGGATTCAATTTCCTAAATGGATCGCTTCCATCAAGTTTGAGAAAATGGAGGAACCTAACCACAATGATATTAAGAGAAAATTACTTCACAGGAGGTATCCCAGGGTTTTTGGCAGAATTTAGCAACCTTCGCGAGTTACAACTTGGTGGTAATTTTTTTGGAGGCAAAATTCCTCTATCGATGGGAACATtgcataatttgttttatggaTTGAATCTGAGTGCTAATGGATTGACAGGTAGCATTCCTTCAGAAATTGGGAAGCTAAAAATGCTACAAAGTCTGGATATATCCTTGAACAATTTGACAGGAAGCATAGTTGCTCTCGAAGATCTTGTTTCATTAATTGAGGTCAACATTTCTTACAATCTCTTCAATGGTTCTGTACCAACAGGTCTAATGAAGTTATTGAATTCCTCACCATCATCATTCATGGGAAATCCTCTCCTATGTATCAATTGTTTGAGTTGCATTAAAACTAGTTATGTAAATATATGTGTCTACAAATCAACTGATCGCAGAGGTATAAGTAAACTTAAAATTGTGATGATAGAACTTGGATCCTCAATATTGATATCTGTTGTGCTGCTAATAATAATCCGAGTGTATATTCATAGAAAGGAATTGAAAATGAAGTCCTATCTTGATGAATGTGATAATGATAGTAGAGTTGGATGGATTAGAGCAATCGACATCTCGACTGACGAGAATGCACCCACCCTTCAGAACCAAGTGTTGCAGGCTACAGAGAACCTAAGTGATCATTATATCATTGGCAGAGGAGCGCATGGAATTGTGTACAAAGCAATACTTGGTCGACGTGGACGGGTTTTTGCTGTAAAGAAATTTGAATTCACAAGGAGCAAGGAAAAGCAGCAACGTATGATGCGACAAGAAATTGAAGTACTTGACATGTATAAGCATCGAAACGTAATCAAATGTGCAGGCTACTGGGTCGGAGAGGAATATGGTTTAGTCTTATATAAATTCATGGCAAATGGAAGCCTTCATGATATTTTACATGAAAAGAATCCCCCACCACCCTTATCGTGGAATTTCAGGTTTAACATAGCTGTTGGAATTGCTGAAGGACTAGCATATCTGCATAGCGAGTGTAATCCATCCGTAGTGCACCGAGACATCAAACCAGCAAATATTCTGGTTGACGACAATATGGAGCCAGTTATAGCTGATTTTGGTACTGCCCTATACAGGAAGTTGTCTGAAGATTCTTATAATCCTTCAGAAACCAGAAAAATGCTTTCCACTAAAGTTATTGGTACCCCTGGCTATATTGCACCAGAGAATGCATATGTAATAGTGCAGAGCAGAAAGTCTGATGTATATAGCTACGGCGTTGTTTTGCTCGAGATAATAACCAGAAAGAGAGTGGTAGTTCCCTGTTTGAATGATGAGTCAAACGTGACATCTTTAGTGAGCTGGGCTAGATCTGTATGGCTGGAAACAGGCAAAATTGAGTACATTGCTGATTCATATCTTGCTGAAGCATTTCCCAATTCAGCAGCACTGAGCAAGCAAGTCACGACAATGTTTTTATTGGCATTGCAATGCACGGAGAAGGATCCACGAAAGAGACCAACCATGAAAGATGTTATTGGCTTGTATAAAAGGGACATGTTTAAGTGGTGTGATGAGGAGGAATACAGTGATACGGTTGCAGCTGATACATCATTACAACCATATAGTCCTAATATTTTTCCTATCATTCCAGTTGTCAGCATTGACCACCATATACAGGGAGAAAGCAGTAGGGCTGCAGCTCAAAGACAAAGAGACGTTACATTTACTGTGGAGGCTGAATCTATGGATTATAGTGACTTTCGCTTATGGCAGGTCATTGATCAATTTCAGTTCGGATTTTGTGTTGAAGATGATTGGAGTCGCATACCTACAATTTATATTGATGGACTTTTAGTTCAACTGATGGGAAATGGTAACATAACGGCTGAAAAGGTTTTGGTGGTAGCTTCTATGAATGTTCCAAAAATAACCTATGTTTGGCCTAGTTTGATTTTCCTTCCCTCTGTCGTTGGTCCAATAGTAACCAAACCTTTCAATTGGTTTTTTCTCTCAAGTTGGGGCCAATATATGCACCTTCATAAATCCTTGTCTTATCAACCCAAATCATACTTCATAAATGCCAATAAAATTAATGCCCTTCAGGACCTAATACTGGAAGCTACAGAGAACCTAAATGATCGGTATATTATTGGCAGAGGAACAGATTATAGTGTGTACAAAATCATACTTGGTCAACAAGTTTTTGCTTTAAAGAAGTTTGAATTTGGAAGGAACAAGAAAAAACAGCTAAATATCATGCTCACTGAACTTGAAGTCCTTGAGATGCTTAAGCAtcaaaatttaatcaaatacaCGAACTACTGGATTGGAAGCCCTTATGGTTTAGTCTTATATAAATTCATGGAAAATGGAAGCCTTCATGATATTTTACATAAGAAACCCCCACCACCCCTTATCTGGAGTCACCGGTTTAAGATTGCTGCTGGAATTGCTAAAGGATTAGCACATATGCATTACAATTGTATCCTACCCTTAATGCACGGAGACATCAAATCAAAGAACATACTTCTTGATGCTAATATGGAGCCTATTATATCTGGTTTTGGTACTGGCCTGCTATGGGACCTGTCTGAGGTTTCTTACAGTCATTCTGAAACCAGGCAAATGTTGTCGTTGCACGTTGTTGGTACCCCGGGTTATATTGCACCAGAGAATACATATATCGTGGGGCAGGAAAGAAAGTCTGACGTATATAGCTACGGAGTTGTTTTGCTCGAGCTAATAACCAGAAAGAAAGTGTTTGTTTTCTCATTGAATGATGCGACAACTTTAGTGAGTTGGGCTAGATCTATATGGCTGGAAACAGGCAAAGTTGAGAATATTGTTGATCCATACCTTGCAAGTTCATTTCCTAATTCACCAGCACTGGCCAAACAAGTGACGAAAGCGTTTATATTGGCATTACAATGCACAGATAGGGACCTACAAAATAGACCGACCATGAAAGATGTTATTGACATGTATAATAGTGACTTGTTTAAGTGGAGTCGTGGCGAGGTTGAACATCGTGATGCAGTTGCAGCTAATCATAATGCAAGTGGCCAATTGTCATAA 4467 0.3801 MTRYSCSSKIITLLLFIISFLHGASPLTSDGLTLLSLLTHWTFVPPLINSSWKASDSSPCSWVGVQCDHTNNLISLNLTSYGIFGQLGPEIGNLYHLQTLMLLGNGFSGKLPLELSNCSFLENLDLSSNRFSGKIPYSLKNLQNLQFMRLSSNLLTGEIPDSLFQIPLLEEVSLHRNQLSGPIPTNIGNLTNLLRLYLYANQLSGTIPSSLGNCSKLEDLELSFNHLRGEIPISIWRISSLVNIMVQNNSLSGELPFEMTKLRYLKNISLFDNQFSGVIPQSLGINSSIVKLDCMNNKFSGNIPPNICFGKHLLVLNMGINQLEGGIPSDVGRCATLVRLFLNDNNFSGFLPDFVSNLNLKYMDMSKNNISGPIPSSLENSTNLTYINLSKNKFAGLIPAELGNLVNLVILDVAHNNLEGPLPFWLSNCNKMDRFDVGFNFLNGSLPSSLRKWRNLTTMILRENYFTGGIPGFLAEFSNLRELQLGGNFFGGKIPLSMGTLHNLFYGLNLSANGLTGSIPSEIGKLKMLQSLDISLNNLTGSIVALEDLVSLIEVNISYNLFNGSVPTGLMKLLNSSPSSFMGNPLLCINCLSCIKTSYVNICVYKSTDRRGISKLKIVMIELGSSILISVVLLIIIRVYIHRKELKMKSYLDECDNDSRVGWIRAIDISTDENAPTLQNQVLQATENLSDHYIIGRGAHGIVYKAILGRRGRVFAVKKFEFTRSKEKQQRMMRQEIEVLDMYKHRNVIKCAGYWVGEEYGLVLYKFMANGSLHDILHEKNPPPPLSWNFRFNIAVGIAEGLAYLHSECNPSVVHRDIKPANILVDDNMEPVIADFGTALYRKLSEDSYNPSETRKMLSTKVIGTPGYIAPENAYVIVQSRKSDVYSYGVVLLEIITRKRVVVPCLNDESNVTSLVSWARSVWLETGKIEYIADSYLAEAFPNSAALSKQVTTMFLLALQCTEKDPRKRPTMKDVIGLYKRDMFKWCDEEEYSDTVAADTSLQPYSPNIFPIIPVVSIDHHIQGESSRAAAQRQRDVTFTVEAESMDYSDFRLWQVIDQFQFGFCVEDDWSRIPTIYIDGLLVQLMGNGNITAEKVLVVASMNVPKITYVWPSLIFLPSVVGPIVTKPFNWFFLSSWGQYMHLHKSLSYQPKSYFINANKINALQDLILEATENLNDRYIIGRGTDYSVYKIILGQQVFALKKFEFGRNKKKQLNIMLTELEVLEMLKHQNLIKYTNYWIGSPYGLVLYKFMENGSLHDILHKKPPPPLIWSHRFKIAAGIAKGLAHMHYNCILPLMHGDIKSKNILLDANMEPIISGFGTGLLWDLSEVSYSHSETRQMLSLHVVGTPGYIAPENTYIVGQERKSDVYSYGVVLLELITRKKVFVFSLNDATTLVSWARSIWLETGKVENIVDPYLASSFPNSPALAKQVTKAFILALQCTDRDLQNRPTMKDVIDMYNSDLFKWSRGEVEHRDAVAANHNASGQLS 1488
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu05g03526 1488 Gene3D Ribonuclease Inhibitor 359 595 IPR032675 -
Tsu05g03526 1488 ProSitePatterns Serine/Threonine protein kinases active-site signature. 813 825 IPR008271 GO:0004672|GO:0006468
Tsu05g03526 1488 Gene3D Transferase(Phosphotransferase) domain 1 768 995 - -
Tsu05g03526 1488 Gene3D Transferase(Phosphotransferase) domain 1 1252 1477 - -
Tsu05g03526 1488 SUPERFAMILY Protein kinase-like (PK-like) 1164 1459 IPR011009 -
Tsu05g03526 1488 ProSitePatterns Protein kinases ATP-binding region signature. 695 719 IPR017441 GO:0005524
Tsu05g03526 1488 Gene3D Phosphorylase Kinase; domain 1 1157 1251 - -
Tsu05g03526 1488 ProSiteProfiles Protein kinase domain profile. 689 984 IPR000719 GO:0004672|GO:0005524|GO:0006468
Tsu05g03526 1488 PANTHER RECEPTOR KINASE-LIKE PROTEIN XA21 4 987 - -
Tsu05g03526 1488 PANTHER RECEPTOR KINASE-LIKE PROTEIN XA21 1154 1467 - -
Tsu05g03526 1488 ProSiteProfiles Protein kinase domain profile. 1175 1464 IPR000719 GO:0004672|GO:0005524|GO:0006468
Tsu05g03526 1488 Gene3D Ribonuclease Inhibitor 30 184 IPR032675 -
Tsu05g03526 1488 Pfam Protein kinase domain 1180 1456 IPR000719 GO:0004672|GO:0005524|GO:0006468
Tsu05g03526 1488 Pfam Protein kinase domain 693 975 IPR000719 GO:0004672|GO:0005524|GO:0006468
Tsu05g03526 1488 PANTHER OS08G0446200 PROTEIN 1154 1467 - -
Tsu05g03526 1488 SUPERFAMILY Protein kinase-like (PK-like) 679 976 IPR011009 -
Tsu05g03526 1488 Gene3D Phosphorylase Kinase; domain 1 663 767 - -
Tsu05g03526 1488 SUPERFAMILY L domain-like 51 304 - -
Tsu05g03526 1488 Pfam Leucine rich repeat N-terminal domain 29 68 IPR013210 -
Tsu05g03526 1488 SUPERFAMILY RNI-like 268 579 - -
Tsu05g03526 1488 ProSitePatterns Serine/Threonine protein kinases active-site signature. 1296 1308 IPR008271 GO:0004672|GO:0006468
Tsu05g03526 1488 PANTHER OS08G0446200 PROTEIN 4 987 - -
Tsu05g03526 1488 Gene3D Ribonuclease Inhibitor 287 358 IPR032675 -
Tsu05g03526 1488 Gene3D Ribonuclease Inhibitor 185 286 IPR032675 -
Tsu05g03526 1488 SMART serkin_6 689 984 IPR000719 GO:0004672|GO:0005524|GO:0006468
Tsu05g03526 1488 SMART serkin_6 1175 1464 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tsu05g03526 Tsu-Chr5 46822487 46836890 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tsu05g03526 73 990 Receptor kinase-like Gene Family AT1G73080 43.874 0.0 716
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-XI-1 Tsu05g03526 Pkinase 8.2e-33 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu05g03526 - - mtr:MTR_5g087360 2176.36