Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu05g03497 ATGAAACCAATCAAATTCAGATTATCACTTTTGTTCTTGTTACTGGCCTCGAAATCCTTCATTGCAGAATCAAAATGTAGCAAAACTTGTGACTTGGCTTTAGCTTCCTATTATATACAAAAAGGTTCAAACTTGACATATATTTGGGACATCATGAAATCCAAGGTTGTTTTAAAACCTGAAGATATTTTCAGCTACAACAATGACACAAtgttaaacaaatattttgtccTATCCAATTCAAGAGTGAATGTTCCATTCCCTTGTGAATGCATCAATGATGAGTTTCTTGGTCACACTTTTCTACACGAGCTTCACCCAAAAGATACCTATGCTTCAATTGCTGAGTTGACTTTTACCAATTTGACCAATGAAGCATGGATGCAGAGAGACAATATTTATGCAGCAAGAAGCTCTATTCCTAAATTTGTGAATGTTACTGTTAACTGTTCCTGTGGGAACAGAGAAGTTTCTAAGGATTATGGTTTGTTCATCACATACCCTCTTAGTCCTAATGACACTTTGGAGTCTATTGCAAAGGATACCAAACTTGATGCTGAGTTGCTGCAGAGGTACAACCCTGGTGTGAATTTCAGCCAAGGAACTGGTCTTGTTTTTATTCCTGGAAAAgATGAAAATGGAGTTTATGTTCCATTTCCCTCTAGAAAAGCAGGTCATTTAGCTAGAAGTTTAGTTATTGCTGGAACATCTACTGGAGGAATATGCATGGTTCTGTTATTATCAATTTGTATATATGTTCGATACTTCAGAAAGAAGAATTTAGGGAAGTCTAAATTGACACCAGAAGATTCAACGGGACATTCAACTAAAGATGAGTTTTCGTACGAAGAACTAGCCATCGCTACAGATAACTTCAGTTTGGCTAACAAAATTGGTCAAGGTGGTTTTGGAGAGGTCTATTATGGAGAGTTGAGAGGCAAGAAAACTGcaataaaaaagatgaagaagCAAGCAACAAGAGAATTTTTTGCTGAAATGAAAGTCTTAACAAGTGTTCATCACCTCAACCTAGTACGCTTGATTGGATATTGTATTGAGAGATCTCTATTCCTTGTTTATGAATACATGGACAATGGAAACTTAAGCCAACATCTACATAATTCAGAGAAAGAACCTATGACATGGTCTACCAGGTTGCGAATTGCTCTGGATGTAGCGAGAGGCCTCGAGTATATTCATGATCACTCCGTGCCTGTATATATCCATCGCGACATAAAATcagataatattttattaaacgGAAACTTCAATGGAAAGATTGCAGATTTTGGAATGACCAAACTGACTGATATCGCAAGTTCAACAGATAACACTGATCATGTCGCTGGCACATTTGGTTATATGCCGCCTGAAAATGCATACGGACATATTTCTCGCAAGATAGATGTATATGCTTTTGGAGTTGTTCTGTACGAACTAATTTCTGCTAAAGCAGCCGTGGTCAAAATTGATAAACGTAGTGCCGAGTTCAAGAGCCTTGAGATTAAGACCaatgagtctattgatgaatacAAAAGCCTTGTAGCTTTGtTTGATGAAGTTATTGATCAAGAGGTAGATCCTATGGAAGGTCTAAGAAAACTGGTGGATCCAAGGCTAGGAGATAACTATTCAATTGATTCCATTAACAAGATGGCACAGCTTGCCAAGACTTGCACAAACCGAGATCCGAAACAACGTCCAAGAATGGGAGATATTGTGGTTTctcttatgaaaataaattctACTATTGATGATGGAAGTAGGATAGATAGTGCAGCATTGAGTCTGGCTATAGAGCATGCCTAA 1809 0.3604 MKPIKFRLSLLFLLLASKSFIAESKCSKTCDLALASYYIQKGSNLTYIWDIMKSKVVLKPEDIFSYNNDTMLNKYFVLSNSRVNVPFPCECINDEFLGHTFLHELHPKDTYASIAELTFTNLTNEAWMQRDNIYAARSSIPKFVNVTVNCSCGNREVSKDYGLFITYPLSPNDTLESIAKDTKLDAELLQRYNPGVNFSQGTGLVFIPGKDENGVYVPFPSRKAGHLARSLVIAGTSTGGICMVLLLSICIYVRYFRKKNLGKSKLTPEDSTGHSTKDEFSYEELAIATDNFSLANKIGQGGFGEVYYGELRGKKTAIKKMKKQATREFFAEMKVLTSVHHLNLVRLIGYCIERSLFLVYEYMDNGNLSQHLHNSEKEPMTWSTRLRIALDVARGLEYIHDHSVPVYIHRDIKSDNILLNGNFNGKIADFGMTKLTDIASSTDNTDHVAGTFGYMPPENAYGHISRKIDVYAFGVVLYELISAKAAVVKIDKRSAEFKSLEIKTNESIDEYKSLVALFDEVIDQEVDPMEGLRKLVDPRLGDNYSIDSINKMAQLAKTCTNRDPKQRPRMGDIVVSLMKINSTIDDGSRIDSAALSLAIEHA 602
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu05g03497 602 PANTHER LYSM DOMAIN RECEPTOR-LIKE KINASE 3 11 592 - -
Tsu05g03497 602 PANTHER CHITIN ELICITOR RECEPTOR KINASE 1-RELATED 11 592 IPR044812 GO:0019199|GO:0045087
Tsu05g03497 602 Pfam Protein tyrosine and serine/threonine kinase 294 490 IPR001245 GO:0004672|GO:0006468
Tsu05g03497 602 Gene3D Transferase(Phosphotransferase) domain 1 363 594 - -
Tsu05g03497 602 Gene3D Phosphorylase Kinase; domain 1 264 362 - -
Tsu05g03497 602 ProSiteProfiles Protein kinase domain profile. 292 584 IPR000719 GO:0004672|GO:0005524|GO:0006468
Tsu05g03497 602 SUPERFAMILY Protein kinase-like (PK-like) 274 578 IPR011009 -
Tsu05g03497 602 ProSitePatterns Protein kinases ATP-binding region signature. 298 320 IPR017441 GO:0005524
Tsu05g03497 602 ProSitePatterns Serine/Threonine protein kinases active-site signature. 407 419 IPR008271 GO:0004672|GO:0006468
Tsu05g03497 602 SMART serkin_6 292 578 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tsu05g03497 Tsu-Chr5 46457883 46461467 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tsu05g03497 4 583 Receptor kinase-like Gene Family AT3G21630 48.622 0.0 570
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LysM Tsu05g03497 PK_Tyr_Ser-Thr 6.4e-46 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu05g03497 - K13429 mtr:MTR_5g086540 840.106