Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu05g03493 AtgaagctcaaaaataagttcatATTGTTGATTCTGTTTCTGCATTGTGCTATTTTCAAAGTAGAATCAATGTGTGTGAAAGGGTGTGATGTAGCTTTAGCTTCATACTATATCATGCCTTTGATTCAACTTTCAAATATAACAACCTTTATGCAATCAAAGATTGTTACAAATTCTCCTAAGGTTATAATGAGCTATAATAAAGACATAGTATTCAGTAATGATAatcttttttcatattttagaaTCAACATTCCATTTCCATGTGAATGTATTGGAGGCGAATTTCTCGGTCATGTGTTTGAATATACGGCTTCTGAAGGTGATACATACAATTTGATTGCGAATACTTATTATGCAAGTTTGACAACTGTTGAGGTTTTGAAAAAGTTCAATAGTTATGATCCAAATCATATACCTGTTAAGGCTAAAGTTAATGTTACTGTTAATTGTTCTTGTGGGAATAGTCAGATTTCAAAAGATTATGGCTTGTTTATTACTTATCCACTTAGGACTAGGGATACTCTTCAAAACATTGCAAGTGATTCTAAACTTGATGAAGGGGTGATACAAAGCTTCAATTCTGGTGTCAATTTCAGCAAAGGGAGTGGGATAGTTTTCATTCCAGGAAGAGCAGGTCTTGCTAAAGGTGCAGCTATTGGTATAACTATAGCAGGAATATTTGGACTTCTATTGATAGTTATATGCATATATGTCAAATACTTccaaaagaaggaagaagagaaaGTTAAACTTCCACAAACTTCTATGGCTCTTTCAACTCAAGATGCATCTGCTAGTGGAGAATATGAAACATCAGGATCCAGTGGGCCTGGTACCGGTAGTACTGCTGGTCTTACAGGCATTATGGTCGCAAAGTCAACAGAATTTTCGTATCAAGAACTAGCTAAGGCAACAAATAACTTCAGCTTGGATCATAAAATTGGTCAAGGTGGATTTGGAGCTGTCTATTATGCAGAACTTAGAGGCGAGAAAACAGCGATTAAGAAGATGGACGTACAAGCGTCGACAGAATTTCTCTGTGAGTTGAAGGTCTTAACACATGTTCATCATTTGAATCTGGTGAGGTTGATTGGATATTGCGTCGAGGGATCACTTTTCCTCGTATATGAACATATTGACAATGGAAATTTGGGTGAATATTTGCATGGTATAGGTAGAGAACCATTACCATGGTCAAGTAGAGTTCAAATTGCTCTAGATTCAGCAAGAGGGCTTGAATACATTCATGAACACACTGTTCCTGTGTATATCCATCGCGATGTAAAATCTGCAAATATATTAATAGACAAAAACTTACGCGGAAAGGTCGCGGATTTTGGCTTGACCAAACTTATTGAAGTTGGAAACTCCACACTTCACACTCGTCTCGTTGGAACTTTTGGTTACATGCCACCAGAATATGCTCAATATGGTGATGTATCTCCAAAAATAGATGTATATGCTTTTGGAGTTGTTCTTTATGAACTTATTTCTGCAAAGAATGCAATTCTAAAGACAGGTGAATCTGTTGCTGAATCAAAGGGTCTTGTAGTCTTGTTTGAAGAAGCACTTAATCAGATTGATCCTTTAGAAGGTATTCGCAAATTGGTGGATCCTAGACTCAAAGAGAACTATCCAATTGATTCTGTTCTAAAGATGGCTGAACTTGGAAGAGCATGTACAAGAGACAATCCATTACTACGTCCAAGTATGAGATCTATAGTTGTTTCTCTTATGACACTCTCATCACCAATTGAAGATTGTGATGATGACAATTCCTATGAAAATCAAACTATCATAAATCTATTGTCAGTGAGATGA 1824 0.3514 MKLKNKFILLILFLHCAIFKVESMCVKGCDVALASYYIMPLIQLSNITTFMQSKIVTNSPKVIMSYNKDIVFSNDNLFSYFRINIPFPCECIGGEFLGHVFEYTASEGDTYNLIANTYYASLTTVEVLKKFNSYDPNHIPVKAKVNVTVNCSCGNSQISKDYGLFITYPLRTRDTLQNIASDSKLDEGVIQSFNSGVNFSKGSGIVFIPGRAGLAKGAAIGITIAGIFGLLLIVICIYVKYFQKKEEEKVKLPQTSMALSTQDASASGEYETSGSSGPGTGSTAGLTGIMVAKSTEFSYQELAKATNNFSLDHKIGQGGFGAVYYAELRGEKTAIKKMDVQASTEFLCELKVLTHVHHLNLVRLIGYCVEGSLFLVYEHIDNGNLGEYLHGIGREPLPWSSRVQIALDSARGLEYIHEHTVPVYIHRDVKSANILIDKNLRGKVADFGLTKLIEVGNSTLHTRLVGTFGYMPPEYAQYGDVSPKIDVYAFGVVLYELISAKNAILKTGESVAESKGLVVLFEEALNQIDPLEGIRKLVDPRLKENYPIDSVLKMAELGRACTRDNPLLRPSMRSIVVSLMTLSSPIEDCDDDNSYENQTIINLLSVR 607
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu05g03493 607 ProSitePatterns Protein kinases ATP-binding region signature. 315 337 IPR017441 GO:0005524
Tsu05g03493 607 ProSitePatterns Serine/Threonine protein kinases active-site signature. 424 436 IPR008271 GO:0004672|GO:0006468
Tsu05g03493 607 Gene3D Phosphorylase Kinase; domain 1 289 379 - -
Tsu05g03493 607 Gene3D Transferase(Phosphotransferase) domain 1 380 602 - -
Tsu05g03493 607 PANTHER CHITIN ELICITOR RECEPTOR KINASE 1-RELATED 10 594 IPR044812 GO:0019199|GO:0045087
Tsu05g03493 607 PANTHER LYSM DOMAIN RECEPTOR-LIKE KINASE 3 10 594 - -
Tsu05g03493 607 SMART serkin_6 309 581 IPR000719 GO:0004672|GO:0005524|GO:0006468
Tsu05g03493 607 Pfam Protein tyrosine and serine/threonine kinase 310 578 IPR001245 GO:0004672|GO:0006468
Tsu05g03493 607 ProSiteProfiles Protein kinase domain profile. 309 582 IPR000719 GO:0004672|GO:0005524|GO:0006468
Tsu05g03493 607 SUPERFAMILY Protein kinase-like (PK-like) 290 579 IPR011009 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tsu05g03493 Tsu-Chr5 46430172 46441553 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tsu05g03493 1 607 Receptor kinase-like Gene Family AT3G21630 54.647 0.0 649
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LysM Tsu05g03493 PK_Tyr_Ser-Thr 6.2e-43 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu05g03493 - K13429 gmx:100776847 879.396