Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu05g03492 ATGATGAAACCAATCAAATTCAGATTATTACTTCTATTCTTGTTACTGGCCTTTAAGTCCTTTACTGCAGAATCATACTGTAGCAAAACTTGTGACTTAGCTTTAGCTTCCTACAATATACAAAAAGGTTCAAACTTAACATATATTTCATCCATCATGAAATCCAAGATTGTTTCAAAACCTGAAGATATTTTCAGCTACAACACTGACACATTACAAAGCCCAGATTCTCTTCTAGTAGATTCTAGAGTGAATGTTCCCTTCCCTTGTGCTTGCATCTATGATGAGTTTCTTGGTCTCACTTTTCTATATGAGCTTCACACAGGAGATACCTATGCTTCAATTCCTGAATTCACTTTTAGAAATTTGACCACTAAGGAGAGGCTGCAGAGAGAGAACGTTTATAGTCCAGATAATATTCCTGTTGATGGAACTCTTAATGTTACTGTTAACTGTTCATGTGGGAACAGAGAGGTTTCTAAGGATTATGGTTTGTTCATCACATACTCTCTTAGTTCTAAGGACAGTTTGGACTCTATTGCAAAGAATACCAAACTTGATGCTGAGTTGCTGCAGAGGTACAACCCTGGTGTGAATTTCAGCCAAGGCAGTGGTCTTGTTTTTATTCCAGGAAAAGGTTCAGTTTTTATTTTGCTGTCATTAAGTTTAGTTACTGCTGGAATATCGGTTGGAGGAATATGCGTGGTTCTGTTATTATCAATTTGTATATATGCTCGATACTTTCGAAAGAAGAATGGAGAGGAGTCAAATTTTCCACCAAATGATTCTATGGCACCTTCAAATAAAGATGCCAAATTCATCGTGGTAAACAAATCACCGGAGTTTTCGTACAAAGAACTAGCCAATGCTACTGATAACTTCAGTTTGGCTAACAAAATCGGTCAAGGTGGTTTTGGAGAGGTCTACTATGGAGAGCTGCGAGGCCAGAAAACTGcaataaaaaagatgaagatCCAAGCGACAAGAGAATTTCTTGCTGAACTTAAAGTCTTAACAAGTGTTCATCACTGGAACCTGGTACACTTGATTGGATATTGTGTTGAGGGATCTCTATTCCTTGTTTATGAATACATAGACAATGGAAACTTAAGCCAACATCTACATAATTCAGAGAAAGAACCGCTGACATGGTCTACAAGGGTGCAAATTGCTCTTGATGTTGCAAGAGGACTCGAGTATATTCATGATCATTCAGTGCCTGTATACATCCATCGCGACATTAAATcagataatattttattaaatgaaaacTTCACTGCGAAGATTGCTGATTTTGGACTAACCAAGCTGACTGATGTTGCAAGTTCAACAGATAAGACTGATCATGTGGCAGGAACATTTGGTTACATGCCGCCCGAAAATGTATATGGACGTATATCTCGCAAGATAGACGTATATGCTTTTGGAGTTGTTCTTTATGAACTAATTTCTGCTAAAACGGCTGTGATCAAGATTGATAAAACTGAGTTTGAGTGCAAGAGCCTTGAGATTAAGACCAATGAATCTATTGATGAATACATGAGCCTTGTAGCTTTGTTTGATGAAGTTATTGATGAAGAGGGAGATCATATAGAAGGTCTAAGAAAACTAGTAGATCCAAGGCTGGGAGATAACTATTCAATTGATTCCATCAACAAGATGGCACAGCTTGCCAAGGCTTGCATAAACCGAGATCCGAAACAACGTCCAACAATGAGATCTGTTGCGGTTTCTCTTATGACATTAAATTCAACAATTTATGATGGTACAGACAGTACATCATTGAGTGTTACTATGGAGCATGACTCAAATTCAAATGAAATATTCCAATGTGAAACTTAA 1842 0.3692 MMKPIKFRLLLLFLLLAFKSFTAESYCSKTCDLALASYNIQKGSNLTYISSIMKSKIVSKPEDIFSYNTDTLQSPDSLLVDSRVNVPFPCACIYDEFLGLTFLYELHTGDTYASIPEFTFRNLTTKERLQRENVYSPDNIPVDGTLNVTVNCSCGNREVSKDYGLFITYSLSSKDSLDSIAKNTKLDAELLQRYNPGVNFSQGSGLVFIPGKGSVFILLSLSLVTAGISVGGICVVLLLSICIYARYFRKKNGEESNFPPNDSMAPSNKDAKFIVVNKSPEFSYKELANATDNFSLANKIGQGGFGEVYYGELRGQKTAIKKMKIQATREFLAELKVLTSVHHWNLVHLIGYCVEGSLFLVYEYIDNGNLSQHLHNSEKEPLTWSTRVQIALDVARGLEYIHDHSVPVYIHRDIKSDNILLNENFTAKIADFGLTKLTDVASSTDKTDHVAGTFGYMPPENVYGRISRKIDVYAFGVVLYELISAKTAVIKIDKTEFECKSLEIKTNESIDEYMSLVALFDEVIDEEGDHIEGLRKLVDPRLGDNYSIDSINKMAQLAKACINRDPKQRPTMRSVAVSLMTLNSTIYDGTDSTSLSVTMEHDSNSNEIFQCET 613
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu05g03492 613 ProSitePatterns Protein kinases ATP-binding region signature. 300 322 IPR017441 GO:0005524
Tsu05g03492 613 Pfam Protein tyrosine and serine/threonine kinase 296 497 IPR001245 GO:0004672|GO:0006468
Tsu05g03492 613 SUPERFAMILY Protein kinase-like (PK-like) 273 579 IPR011009 -
Tsu05g03492 613 SMART serkin_6 294 581 IPR000719 GO:0004672|GO:0005524|GO:0006468
Tsu05g03492 613 PANTHER LYSM DOMAIN RECEPTOR-LIKE KINASE 3 12 593 - -
Tsu05g03492 613 ProSitePatterns Serine/Threonine protein kinases active-site signature. 409 421 IPR008271 GO:0004672|GO:0006468
Tsu05g03492 613 PANTHER CHITIN ELICITOR RECEPTOR KINASE 1-RELATED 12 593 IPR044812 GO:0019199|GO:0045087
Tsu05g03492 613 Gene3D Phosphorylase Kinase; domain 1 264 364 - -
Tsu05g03492 613 Gene3D Transferase(Phosphotransferase) domain 1 365 601 - -
Tsu05g03492 613 ProSiteProfiles Protein kinase domain profile. 294 582 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tsu05g03492 Tsu-Chr5 46386801 46425984 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tsu05g03492 5 585 Receptor kinase-like Gene Family AT3G21630 50.081 0.0 573
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LysM Tsu05g03492 PK_Tyr_Ser-Thr 2.6e-47 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu05g03492 - K13429 mtr:MTR_5g086540 848.195