Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu05g03491 ATGGAACTCAGATTCATCATCTCACTTTCCTTCTTGTTACTATCTTCAACATCATTCACAACAGAATCAAAGTGTAACAAAGGTTGTAACTTAGCTCTAGCTTCTTACACCATAACTAATGGTGTAAACCTCACATATATTACAAACATTATGAAATCTAATGTTCTTACAAAACCTCAAGacatcatcatcaccaacaACAAAAGCAAAACCAAAAGAGTTAATGTTCCTTTCCCTTGTGATTGCATCAATGGAGAGTTTCTTGCTCATACGTTTGTATATCAGTTTCAGCCAGGTGAAACATATACATCAGTTGCAGAAGATGATTTTTCCAATTTGACAACTGATGTGTGGCTGCAAAACTTTAACATTTATAGACCAACTAATATTCCTGATTTTGCAATGATTAATGTTAGTATTAATTGTTCCTGTGGGAACAGAAAGGTTTCTAAGGATTATGGTTTGTTTATCACATATCCACTTAGAAGTGAGGATAGTCTGGAGTCTATTGCAAAGGATACCAAGATTGAGGCTGGTTTGTTGCAGAGGTATAACCCTGGTGTGAATTTCAGTCAAGGAAGTGGTCTTGTTTTTATTCCTGGAAAagGAGTTGTGGCCATTGTTGGAATATCTGTTGGAGTACTAGCAGGGCTTTTATTATTGTCAATTTGtgtttatattaaatattaccTAAAGAAAAAGGCATGGAAGAAGAAAAACTTGATCTTGGATGATCCCAACATGAACTCAGATCAAACCGGTACTCACATCACAGGCATTATAGTGGAAAACTCACTAGAGTTTTCATACGAAGAATTATCCATTGCTACAAATAACTTCAGTGTGGATAATAAAATTGGTGAAGGTGGTTTTGGAGAAGTCTTTTATGCCGAGCTGAGAGGACAGATAGCCGCTGttaagaagatgaagatgaaagcATCAAAAGAATTTTATGCTGAATTGAAAGTCTTAACTCGTGTTCATCACTTGAACCTGGTAGGGTTAATTGGATATTGTGTTGAAGGTTTTCTCTTCCTTGTCTATGAATACATTGACAATGGAAACTTAAGTCAAAATCTTCGCGATTTAGAAAGAGAACCTTTGCCATGGTCTACAAGGATGCAAATCGCTCTTGATTCAGCCCGAGGTCTTGAATATATTCACGAGCATACTGTGCGTGTATATATCCATCGCGACATAAagtcagaaaatattttattagacAAAAACTTTCGTGCAAAGGTTGCAGATTTTGGATTATCCAAACTTGCTGATGTTGAAAATTCAACTTCATCTGCTATAGTTGCGGAGGGTACATTCGGTTACATGCCACCTGAATATGCGCATGGTGCTATTGCTCTTTCTCCGAAAATAGATGTCTATGCATTTGGAGTTGTTCTATACGAACTAATTTCTGCTAATCCAGCTGTAATCAATGATGGTCCTGAAGTAAAAGGCCTTGTAGCTTTGTTTGATGAAGTGTTTGATCATGAACCGAATTCGACAGAAGCTCTAAAAAATCTGGTGGATCCTAGACTTGGAGATAACTACTCAATTGATTCAGTTTACAATATAGCAAAACTAGCCAAAGCATGTACAATGAAAGGATCCACAACTACGTCCAAGCATGAGATCTGTTGTGGTTGCTCTTATGACAATAACTTCTACTACTGA 1674 0.353 MELRFIISLSFLLLSSTSFTTESKCNKGCNLALASYTITNGVNLTYITNIMKSNVLTKPQDIIITNNKSKTKRVNVPFPCDCINGEFLAHTFVYQFQPGETYTSVAEDDFSNLTTDVWLQNFNIYRPTNIPDFAMINVSINCSCGNRKVSKDYGLFITYPLRSEDSLESIAKDTKIEAGLLQRYNPGVNFSQGSGLVFIPGKGVVAIVGISVGVLAGLLLLSICVYIKYYLKKKAWKKKNLILDDPNMNSDQTGTHITGIIVENSLEFSYEELSIATNNFSVDNKIGEGGFGEVFYAELRGQIAAVKKMKMKASKEFYAELKVLTRVHHLNLVGLIGYCVEGFLFLVYEYIDNGNLSQNLRDLEREPLPWSTRMQIALDSARGLEYIHEHTVRVYIHRDIKSENILLDKNFRAKVADFGLSKLADVENSTSSAIVAEGTFGYMPPEYAHGAIALSPKIDVYAFGVVLYELISANPAVINDGPEVKGLVALFDEVFDHEPNSTEALKNLVDPRLGDNYSIDSVYNIAKLAKACTMKGSTTTSKHEICCGCSYDNNFYY 557
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu05g03491 557 ProSitePatterns Protein kinases ATP-binding region signature. 286 308 IPR017441 GO:0005524
Tsu05g03491 557 Gene3D Phosphorylase Kinase; domain 1 251 350 - -
Tsu05g03491 557 PANTHER LYSM RECEPTOR KINASE 1B 6 535 - -
Tsu05g03491 557 SUPERFAMILY Protein kinase-like (PK-like) 257 490 IPR011009 -
Tsu05g03491 557 Pfam Protein tyrosine and serine/threonine kinase 282 473 IPR001245 GO:0004672|GO:0006468
Tsu05g03491 557 ProSitePatterns Serine/Threonine protein kinases active-site signature. 395 407 IPR008271 GO:0004672|GO:0006468
Tsu05g03491 557 PANTHER CHITIN ELICITOR RECEPTOR KINASE 1-RELATED 6 535 IPR044812 GO:0019199|GO:0045087
Tsu05g03491 557 Gene3D Transferase(Phosphotransferase) domain 1 351 539 - -
Tsu05g03491 557 SMART serkin_6 280 513 IPR000719 GO:0004672|GO:0005524|GO:0006468
Tsu05g03491 557 ProSiteProfiles Protein kinase domain profile. 280 557 IPR000719 GO:0004672|GO:0005524|GO:0006468
Tsu05g03491 557 Coils Coil 296 316 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tsu05g03491 Tsu-Chr5 46382156 46386025 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tsu05g03491 1 535 Receptor kinase-like Gene Family AT3G21630 51.379 0.0 548
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LysM Tsu05g03491 PK_Tyr_Ser-Thr 1.8e-41 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu05g03491 - K13429 mtr:MTR_5g086040 711.064