Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu05g03477 ATGGAGACTCTCACCACTTCAACCAATATTCTCCCCACAATTCCAAAAATTGATATTCCTTCAACATCCACCGATAATCCCTCAAAAAATGATATTGTTCTGATGGATCCTCCCATCACTTCAACCAATAATCCCCTTACAAATCCATTAATTCATACTCCCTCAACATCCACCGATAATCCCTCAAGAAATGATATTGATAACCTAGTTCAACCAGAAATTCAAATAGAAATTCAAGTGGATAACACTGTAGGTTCCACACTTAACGAGATCATAACAACAATATCCATTGGAGTTGAAGCTGAGTCTTCAGCTCCAAATCGGATTCCTGCACCACTACTTAAAATGGCGGCAGTGGCTTCCCTAGCAGCCGGCGTGCAGTATGGGTGGGCATTGCAGCTTTCCCTACTCATGCCATATGTGCAGCTGTTGGGAGTTTCACATCAGTGGGCCGCCAATATATGGTTGTGCGGCCCAATATCCGACATGGTTATCCAACCACTTGTCGGATATTACAGTGACCATTGTCGGTCACGTTTCGGCCGCCGCCGGCCATTTATTTTTTCGGTGTCATAG 576 0.4427 METLTTSTNILPTIPKIDIPSTSTDNPSKNDIVLMDPPITSTNNPLTNPLIHTPSTSTDNPSRNDIDNLVQPEIQIEIQVDNTVGSTLNEIITTISIGVEAESSAPNRIPAPLLKMAAVASLAAGVQYGWALQLSLLMPYVQLLGVSHQWAANIWLCGPISDMVIQPLVGYYSDHCRSRFGRRRPFIFSVS 191
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu05g03477 191 MobiDBLite consensus disorder prediction 43 64 - -
Tsu05g03477 191 Gene3D MFS general substrate transporter like domains 115 191 IPR036259 -
Tsu05g03477 191 PANTHER SUCROSE TRANSPORT PROTEIN SUC7-RELATED 107 188 - -
Tsu05g03477 191 Pfam MFS/sugar transport protein 129 188 - -
Tsu05g03477 191 PANTHER SUGAR TRANSPORTER 107 188 - -
Tsu05g03477 191 SUPERFAMILY MFS general substrate transporter 116 189 IPR036259 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tsu05g03477 Tsu-Chr5 46254868 46255443 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tsu05g03477 110 187 Sucrose Transporter Gene Family AT5G06170 73.077 1.35e-38 136
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu05g03477 K15378 - sspl:121781379 136.346