Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu05g03473 ATGTCATCATCTATCACCAAACTTTTTCTATCATCATTCATTCTTTGCATTTTCTTGCAAGAACACACTCATGCCATTAGAAGGACATATATTGTTTACTTGGGAGGACATTCTCATGGTCCAAATCCTTCCCTTGATGATCTTGAATCAGCCACAAATTCACATTATGATTTACTTGCTTCAATCTTAGGAAGCCATGAGAAGGCAAAGGAAACAGTTATGTATTCTTACAATAAGCACATAAATGGATTTGCTGCATTACTTGAAGATGAAGAGGCAACAAAGATTGCAAAGAACTCAAATGTAGTTTCTGTTTTCTTGAGCAAAGAATATAAATTGCACACTACTAGGTCATGGGAATTTCTTGGATTGGAAAAAGATGGAGCAATTCTTCTTGATTCTGCTTGGTGGATGGCAAGATTTGGGGAAGATACAATCATGGCTAATTTAGATTCAGGTGTTTGGCCAGAACATGAAAGTTTCAGTGACATTGGATATGGTCAAGTTCCATCAAAGTGGCGTGGGAATGGAGTATGTGAGATTGATCATTTTATTACTACTTCAAATACTACAACAACATTCTGCAATAGGAAGTTAATTGGAGCAAGAATATTCAGTAAAAACTACGAAGCACAATATGGAAAACTCAATCTCGCAAACCTCACAGCGCGTGACTTTGTTGGCCACGGCACACACACCTTATCAACAGCCGCGGGTAATTTTTCACCCGATGTAACAATATTTGGTAACGGTAATGGCACAGCAAAAGGTGGGTCCCCAAGAGCGCGAGTGGCATCCTACAAAGTGTGTTGGTCAAAAACCGATGCAgGTGGATGTCATGAAGCTGATATTCTGGAAGCATTTGATCATGCCATATATGATGGTGTTGATGTCATTTCAATCTCTTTGGGTGGTTCTGATCCATATATTGAAGCTTTGTTCACTGATGGAATTTCAATTGGGTCATTTCATGCTGTTGCTAAGAATGTTGTAGTTGTTTGTTCTGCTGGAAATGATGGACCAGCTCCTAGAACTGTTACAAATGTAGCACCTTGGTCTTTTACAGTTGCAGCTAGTACAATTGATAGGGAATTTGTTAGTCACATTTCTATTGGTAACAAACATTACATGAAGGGTGCTAGTCTTAGTAAAGGCTTACCAACAGGTCCATCgaaggaaaagaaaatatatcCGATGATTCATGCAATCGACGCTAGATTTCTTAATGCCACAATTCAAGATGCCCGTTATTGCAAGCCTAGAACACTTGATCCTACCAAAGTAAAGGGAAAGATATTAGTTTGCATTCGACTTGACGAAACAACGTCAATTGCTCAAGGCTTTGAAGCTGCTATTGCAGGTGCAGTAGGAGTTTTTGTGATGAATGATAAGAAAAGTGGAAATATACTTCTAGCTGAGCCTCATCCTTTACCTGGTGCAAGTATGGATGGCATTGAAGATGAAGATATTGATGAACGTGAATGGTTTGGAAAAGGTGGTACTGATGAAAACATAACCAGGAAAATGGTTGCATACATGGATGCTGCACAAACATATACAGGATTAAAGCCAGCTCCAATAATAGCTGGATTCTCATCTAGGGGTCCTAGTGCAGTGCAGCCATTGATACTTAAGCCTGACATAACAGCTCCTGGAGTGAACATATTGGCTGCTTATTCACTAGCCACTAGTCCTTCCAATCTACCATCAGATACACGTCGAGTTCCTTACAATTTGCAACAAGGAACATCTATGTCTTGTCCTCATGTTGCTGGCATCGCTGGTCTTCTCAAGACACTTCATCCTAATTGGAGTCCAGCTGCTATCAAATCAGCCATCATGACTACCGCTACCACACTAGATAACACCAATCAGCCGATTCAGAACGCGTTCGAGAATATATCAACACCATTTGAATATGGTTCTGGACATATACAACCTAACCTTGCAATGGATCCAGGACTTGTTTATGATCTAACCACAACCGATTACTTGAACTTCGTATGTGCTTCTGGTCACAATCAAAACTTACTCAAGTTCTTCAATAACAACTCTTACACTTGCCCTGAGTCTTACAATATCGAAAATCTCAACTATCCTTCAATTACCGTAACTAACCGAGGATTAAACCCTATAAATGTTACTCGTACCGTTACAAATGTTGGGTCTCCTAGCACATATATTGTTGAAACTCACCAACTTGAAGAATTTGAGGTTCATATTCAACCAAGTTCCTTGACATTTAAGAAAATTGGAGAAAAGAAGACCTTTCAGGTAATTATGGAGCCAATTGGTGTACCTGCTCATGGTTTTCCAGTTTTTGGGACATTGACATGGACCAATTTCAAACACAGAGTAACTAGTCCTATTGTAGTTCTTTAA 2382 0.3913 MSSSITKLFLSSFILCIFLQEHTHAIRRTYIVYLGGHSHGPNPSLDDLESATNSHYDLLASILGSHEKAKETVMYSYNKHINGFAALLEDEEATKIAKNSNVVSVFLSKEYKLHTTRSWEFLGLEKDGAILLDSAWWMARFGEDTIMANLDSGVWPEHESFSDIGYGQVPSKWRGNGVCEIDHFITTSNTTTTFCNRKLIGARIFSKNYEAQYGKLNLANLTARDFVGHGTHTLSTAAGNFSPDVTIFGNGNGTAKGGSPRARVASYKVCWSKTDAGGCHEADILEAFDHAIYDGVDVISISLGGSDPYIEALFTDGISIGSFHAVAKNVVVVCSAGNDGPAPRTVTNVAPWSFTVAASTIDREFVSHISIGNKHYMKGASLSKGLPTGPSKEKKIYPMIHAIDARFLNATIQDARYCKPRTLDPTKVKGKILVCIRLDETTSIAQGFEAAIAGAVGVFVMNDKKSGNILLAEPHPLPGASMDGIEDEDIDEREWFGKGGTDENITRKMVAYMDAAQTYTGLKPAPIIAGFSSRGPSAVQPLILKPDITAPGVNILAAYSLATSPSNLPSDTRRVPYNLQQGTSMSCPHVAGIAGLLKTLHPNWSPAAIKSAIMTTATTLDNTNQPIQNAFENISTPFEYGSGHIQPNLAMDPGLVYDLTTTDYLNFVCASGHNQNLLKFFNNNSYTCPESYNIENLNYPSITVTNRGLNPINVTRTVTNVGSPSTYIVETHQLEEFEVHIQPSSLTFKKIGEKKTFQVIMEPIGVPAHGFPVFGTLTWTNFKHRVTSPIVVL 793
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu05g03473 793 ProSitePatterns Serine proteases, subtilase family, serine active site. 582 592 IPR023828 -
Tsu05g03473 793 Pfam Fibronectin type-III domain 696 792 IPR041469 -
Tsu05g03473 793 ProSiteProfiles Serine proteases, subtilase domain profile. 118 651 - -
Tsu05g03473 793 Gene3D Peptidase S8/S53 domain 144 664 IPR036852 GO:0004252|GO:0006508
Tsu05g03473 793 SUPERFAMILY Subtilisin-like 113 655 IPR036852 GO:0004252|GO:0006508
Tsu05g03473 793 PANTHER SUBTILISIN-LIKE SERINE PROTEASE 18 793 - -
Tsu05g03473 793 CDD PA_subtilisin_like 369 483 - -
Tsu05g03473 793 PRINTS Subtilisin serine protease family (S8) signature 142 161 IPR015500 -
Tsu05g03473 793 PRINTS Subtilisin serine protease family (S8) signature 581 597 IPR015500 -
Tsu05g03473 793 PRINTS Subtilisin serine protease family (S8) signature 225 238 IPR015500 -
Tsu05g03473 793 Pfam Peptidase inhibitor I9 29 114 IPR010259 -
Tsu05g03473 793 Gene3D Peptidase S8 propeptide/proteinase inhibitor I9 17 114 IPR037045 -
Tsu05g03473 793 Gene3D - 362 520 - -
Tsu05g03473 793 PANTHER PROPROTEIN CONVERTASE SUBTILISIN/KEXIN 18 793 IPR045051 -
Tsu05g03473 793 Pfam Subtilase family 142 624 IPR000209 GO:0006508|GO:0008236
Tsu05g03473 793 CDD Peptidases_S8_3 111 618 IPR034197 -
Tsu05g03473 793 Gene3D - 668 793 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tsu05g03473 Tsu-Chr5 46176386 46182618 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tsu05g03473 29 792 Subtilisin-like Serine Gene Family AT2G04160 51.760 0.0 773
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu05g03473 - - gmx:100794135 1214.91