Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu05g03464 ATGGCTTTCTCATCATATGATGAAAAAGATGGTCATATGATTGAGAATTCCCTAGCTGCTATTGTAGTTTTCTCCAAGAGCTATGCTTCTTCTACTTTGTGTTTGAATGAACTAGAAAAGATTGTTGAATCAAAGAGAGTGTTTGGATTAGATGTTTTTTCTGTCTTCTATGATGTTACTCCTTCTGATGTTCGTTACCAGAAAAACAGTTTCGGTGAAGCTTTTGGACAACATATCATAAGTTCTGAAGAAGATAAATTGAAGATGCAGAAATGGAGACATTGCTTACATCAAGTTGCGGATTTATCTGGCTTTGAGTCTAAAAATAgGCACGAAAATGATCTGATTGAAGACATTATTAAATCGGTATGGAGAAAGCTACATCTTAAAATACCATATTCCAATGATGGACTAGTTGGGATCAATTACAGAGCTAAAAAATTGGAATCAATTTTAAGAATGCAAGTGAAGGAGAAGGTCCATTTTGTAGGAATATGGGGCATGGGTGGCATCGGAAAGACAACTCTAGCAAGAGTCATATTCAAGAAATTACGTAATGAATTCGATATAAGTTGTTTCGTTGAAAATGTTAGGGAGATTTTTGGTGGAAGAGATGGTAAATTTCACTTACAGAAAACACTTCTTTCTCATATGAATATACATTTGAGGATGGAAGATTTGGATGAACGAAATAATATGATACGAGATGTCTTTCGCAACAATAAAGTTCTTCTCGTTGTTGACGATGTTGATGACAAAAGACAATTAGAGGATTATGCTGGAAAAAAAGAGTGGGAAGAATCTCAATGGAAAGAGGTTTTGGAGACGACACAAGAATTGCTAGAGATTGATGATTTTCATGTAATGAAGACACTTAGAATAAGCTATGATGGGTTACCAATAAAGTATAAGACATTATTTCTTGATATTGCATGTTTTTTTAATGGGTGGGTAAAAGAGGATGTGATACAAATTCTAAAAATTTGTTACCGTTATCCACCAGATGGAATTGAATATCTAATCGATAAATCATTAGCAAGTTATGATGGATTACATTTGGGTATGCATGGTTTGCTTCAAGAAATGGGAAGGAAAATTGTTATTGAAGAATGTATTATAGATGCTGGCAAACGCAGTAGATTGTGGTCTCTTCAGGACATTGACCAaAATTTTGCAGAGTTGAAGTTCATTGATCTGAGCCATTCAAAATATCTAACTCAAACTCCTATTCTTTCTGGGGCTACAAGTCTTGAAAGTTTGATTCTTGAAGGGTGCACAAGCCTTGTTAAGGTTCACAAATCAGTTGGAAAACACAAGAAACTTGTCATATTGAACATGAAAGATTGCAAAAATCTTCAAACACTTCCAAGAAAGTTGAAAATGGATTCTTTGCAGGAGTTGAATCTTTCAGGCTgcacaaaaattacaaagttgCCTAAGTTTGAAAAGAATATGAAATGCTTATCAAGGCTTATAATGTTACTTGGACAATCATCATCctcaatttcttcaaatatatcCTCGCGATGGATATACCACGTTTTCTTGAGTTTTAGAGGAGAAGATACACGTCTTGATTTCACAGATTACATATATGCAGCTTTGGTTCGAAAGGGGATCATAACTTTTAGGGATGACAAGCAACTTGAAAAAGGAGATGAGATTGCGGTTGAACTCTTCAAAGCAATTGAACGGTCACTTTCTGCCGTTATTGTTCTCTCCAAAAACTATGCTTCTTCCACTTGGTGTTTGGATGAGCTGCAAAAAATACTTGAATTGAAAAAAGTGTTCGGAATTGAGGTTTTTCCAGTGTTCTATGGTGTTAGTCCTGATGATGTTCTTAACCAGAGAGATAGTTTTGCTGCGGCTTTTGAAAAACATGCAAGGAGATATGATGAAGAGAGGGTGCGAAGATGGAGGCATTCTTTAGAAGAAGTTGCTGGCATACCTGGCTGGGAGTCCAAGAATCGTGATGAAACAGAGCTGATTGATAATATTGTTGAATCAGTATGGAAAAAACTACGCCCCAAAATGCCTTCTTATGAAGATGGGTTAGTTGGAATTGACTCAAGAGTCGAAAAAATGGCTAAAGTTATAAGGGTGGAATCCATGGACACTAACTTTGTTGGAATATGGGGCATGGGCGGCATAGGAAAGACAACTCTAGCTAGAGTCGTCTTCAAGAAAATCAAACATCAGTTTGATATAAGTTGCTTCCTTGAAAATGTTCGAGAGGTTTCTGAAGAAATAGATGGTTTGCTTTCTTTTCAAAGAAAGCTTCTTTCTCATTTAAACATAAAAGGGTTAGAAATTCAAAACTTGGACGAAGGAAAGAACACAATAAGAAACCTTTTATCCAACAAGAAAATTCTCCtagttgttgatgatgttgatgacaCAAACCATTTAGAGTGTTTGGCTCATAAAGATTGGTTTGGTCATGGAAGCAAGGTGATAATAACAACTAGAGACATACATGTATTAAAATCACATGGAATAGTACAAAGTTATAAAGTTGATGTCTTGAATTTTGATGAATCCCTTCAACTATTGTGTCAAAAGTCCTTTAAAAGAGATCAACCTCATGAACAATATTTGGATTTGTCTAAAGTTGTTGTTCAATATGCTGGTGGTCTTCCTTTAGCACTTAAGCTTTTGGGTGCATTTCTTTGTGGAAGAAGTGAATCTCAATGGAAAGAAGTTGTGGATATGATACAACAAGTACCACCAAATGATATTGTGAAGAAATCACTTAGAATAAGCTACAACGGTTTATCAATGCGTTACAAAACCTTGTTTCTTGACATCGCTTGTCTTTTCAAAGGGTGGATTAAAGAGATTTTAACGCAAATATTACAAATATGTGATCGTTATCCGCCAATTGGAATAGAACTTCTGATTGAAAAATCATTGCTAAGTTATGATGGATTTCGTTTGGGAATGCATGACTTACTTCAAGAAACAGGAAGAGAAATTGTTGTTGAAGAATGTCCTATAGATCCTCTCAAACGCACTAGGCTATGGTCTCTAAAGGACATTGATGAAGTACTAAgctctaataataaaaataagGTATCCGAATCGATTCAGGGTATAATATTCGATTCTGTGCCAAAGTCATATGAAGCAAAGTGGGATCCTGAAGCCTTGTCGATGATGTGTAATCTTAAATTTCTTATCATAAATCAAAATGTACAGCTTCCTCGCGGCCTCAAATGTCTTTGCAGATCATTGAAATTTCTTCAGTGGATGGAGTATCCTTTGGAAGCTTTACCAGATGGTGTCCAGCTAGATGAAATTATAGAGTTGAGGATGCATCAtagtaaaatcaaatatatttggagTGAAACTCAATTTTTTGCAAAGCTGAAGTTCATTGATCTGAGCTTTTCCAAAAATCTAATTCAAACACCTATAGTTTCCGGAGCTCCATGTCTTGAACGCATGTTTCTTATCGGTTGTACAAACCTTGTTGAAGTTCATCATTCTGTTGGACAACACAAGAAGCTTGTTGTGTTATACTTGAAAGACTGCAAAAATCTTAAAATCTTTCCAAGAAAATTGGAAATGGATTCTCTGGAGGAGTTGAATCTTTCAGGCTGCTCAAAAGTTAAAAAACTCCCTGAGTTTGGTAAGAACATGAAATGTTTATCACTGCTTGATTTGGAGAATTGCATAAATCTTATTTGCCTACCAAACTCCATTCACAATTTGAAGTCACTCAAAAAACTCTACATTTCTGGTTGCACAAAATTTTCCAAACTCCCTGACAGTATGAATGAAAATGAGTGTTTGGAGGAGCTTGATCTTAGAGGGACTAATGTAAGAGATATTACTTTATCCAAAATTCATCTAGAAAAACTTAAAGAGTTTTCTTATGGTGGAAGAAAAGAACTTGCATCCAATTCAAGGAACTTAATTTTAAGGATATCAAAGTTTAGGAGACAGCAAGATCCAAAGGAGTTGATAATATTGCCTCCTCTTTCCAGCTTATTAGCTTTGACATCATTGAATTTAAGTTACTGTAACCTTAATGATGAATCAATTCAGAGTATTGGTTCCTTAAAGTTTTTGCAGGAATTGGATATAAGTGGTAACAATTTTGTTAATCCACCAGCTCACTGCATTAGTAATCTTCCTATGCTGCAGAATTTGTCCTTTGCTAATTGTCCAAGGCTTGAGTCTTTGCCTCAGCTTCCGCAAAATGTACAATCCTTATACACTACTAATTGTACTCAACTTAATCCCTTAAATTTGGATCCACAAAGACTATGGAAGATCTTTGAGTCACATTTACGTTTGGATCAGATGGAATATTGGCCAGAACTTTGGTACATCATACCAGGGAGTAAAATTCCATCATGGTTTGACAATCAAGAATGTGATTTTATTAATCCATTGGAACATCCATATAACAAGCTGAATTGTGATTCAATTACATCAATAATAGTGAATGTATCTGATTACTGTCAATCAAGTGAATGGTGGGGAATTGCAGTGTGCTTAGTTTTAGAACCATTATCTAATTCATCCTCATCTCATATGAGACCAAATTCCACTACTAGCATTGAAAAAGAGTGCATTTATTATTGGGTTTGTAAAGCTCCTAATCAAGAACCTGATGAGAATTTTCCCATAGCATCAAAATATGGACACTTAGTTTATGAATTCAATGACCCTAACATCCATATTTTGTTTCTGACTggtgaacatatatatattcaacattATCTAAGTGGAGGGAAAGATCAACTTCAATTGATATTTTATGTTGAGAACCGATCTAAATATTGGAAGGCAACAATAACGAATTGCGGGTGCCGTGTGATATGTAAGGAAGATATTGAAGATTACTCAAATGGTCTTAACATACCAAGATTGACAGAGATGAATCAAGAAATGCAGTAA 4908 0.3443 MAFSSYDEKDGHMIENSLAAIVVFSKSYASSTLCLNELEKIVESKRVFGLDVFSVFYDVTPSDVRYQKNSFGEAFGQHIISSEEDKLKMQKWRHCLHQVADLSGFESKNRHENDLIEDIIKSVWRKLHLKIPYSNDGLVGINYRAKKLESILRMQVKEKVHFVGIWGMGGIGKTTLARVIFKKLRNEFDISCFVENVREIFGGRDGKFHLQKTLLSHMNIHLRMEDLDERNNMIRDVFRNNKVLLVVDDVDDKRQLEDYAGKKEWEESQWKEVLETTQELLEIDDFHVMKTLRISYDGLPIKYKTLFLDIACFFNGWVKEDVIQILKICYRYPPDGIEYLIDKSLASYDGLHLGMHGLLQEMGRKIVIEECIIDAGKRSRLWSLQDIDQNFAELKFIDLSHSKYLTQTPILSGATSLESLILEGCTSLVKVHKSVGKHKKLVILNMKDCKNLQTLPRKLKMDSLQELNLSGCTKITKLPKFEKNMKCLSRLIMLLGQSSSSISSNISSRWIYHVFLSFRGEDTRLDFTDYIYAALVRKGIITFRDDKQLEKGDEIAVELFKAIERSLSAVIVLSKNYASSTWCLDELQKILELKKVFGIEVFPVFYGVSPDDVLNQRDSFAAAFEKHARRYDEERVRRWRHSLEEVAGIPGWESKNRDETELIDNIVESVWKKLRPKMPSYEDGLVGIDSRVEKMAKVIRVESMDTNFVGIWGMGGIGKTTLARVVFKKIKHQFDISCFLENVREVSEEIDGLLSFQRKLLSHLNIKGLEIQNLDEGKNTIRNLLSNKKILLVVDDVDDTNHLECLAHKDWFGHGSKVIITTRDIHVLKSHGIVQSYKVDVLNFDESLQLLCQKSFKRDQPHEQYLDLSKVVVQYAGGLPLALKLLGAFLCGRSESQWKEVVDMIQQVPPNDIVKKSLRISYNGLSMRYKTLFLDIACLFKGWIKEILTQILQICDRYPPIGIELLIEKSLLSYDGFRLGMHDLLQETGREIVVEECPIDPLKRTRLWSLKDIDEVLSSNNKNKVSESIQGIIFDSVPKSYEAKWDPEALSMMCNLKFLIINQNVQLPRGLKCLCRSLKFLQWMEYPLEALPDGVQLDEIIELRMHHSKIKYIWSETQFFAKLKFIDLSFSKNLIQTPIVSGAPCLERMFLIGCTNLVEVHHSVGQHKKLVVLYLKDCKNLKIFPRKLEMDSLEELNLSGCSKVKKLPEFGKNMKCLSLLDLENCINLICLPNSIHNLKSLKKLYISGCTKFSKLPDSMNENECLEELDLRGTNVRDITLSKIHLEKLKEFSYGGRKELASNSRNLILRISKFRRQQDPKELIILPPLSSLLALTSLNLSYCNLNDESIQSIGSLKFLQELDISGNNFVNPPAHCISNLPMLQNLSFANCPRLESLPQLPQNVQSLYTTNCTQLNPLNLDPQRLWKIFESHLRLDQMEYWPELWYIIPGSKIPSWFDNQECDFINPLEHPYNKLNCDSITSIIVNVSDYCQSSEWWGIAVCLVLEPLSNSSSSHMRPNSTTSIEKECIYYWVCKAPNQEPDENFPIASKYGHLVYEFNDPNIHILFLTGEHIYIQHYLSGGKDQLQLIFYVENRSKYWKATITNCGCRVICKEDIEDYSNGLNIPRLTEMNQEMQ 1635
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu05g03464 1635 Gene3D Ribonuclease Inhibitor 1300 1443 IPR032675 -
Tsu05g03464 1635 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN 269 398 IPR044974 GO:0006952
Tsu05g03464 1635 SUPERFAMILY Toll/Interleukin receptor TIR domain 13 105 IPR035897 -
Tsu05g03464 1635 Gene3D - 676 837 IPR027417 -
Tsu05g03464 1635 Gene3D - 128 284 IPR027417 -
Tsu05g03464 1635 PANTHER RESISTANCE PROTEIN (TIR-NBS-LRR CLASS), PUTATIVE-RELATED 14 262 - -
Tsu05g03464 1635 PANTHER RESISTANCE PROTEIN (TIR-NBS-LRR CLASS), PUTATIVE-RELATED 269 398 - -
Tsu05g03464 1635 PANTHER RESISTANCE PROTEIN (TIR-NBS-LRR CLASS), PUTATIVE-RELATED 514 1218 - -
Tsu05g03464 1635 PANTHER RESISTANCE PROTEIN (TIR-NBS-LRR CLASS), PUTATIVE-RELATED 399 506 - -
Tsu05g03464 1635 Gene3D - 509 675 IPR035897 -
Tsu05g03464 1635 Gene3D - 5 127 IPR035897 -
Tsu05g03464 1635 SUPERFAMILY RNI-like 390 497 - -
Tsu05g03464 1635 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 127 310 IPR027417 -
Tsu05g03464 1635 SMART till_3 511 649 IPR000157 GO:0007165
Tsu05g03464 1635 SMART till_3 2 102 IPR000157 GO:0007165
Tsu05g03464 1635 PANTHER RESISTANCE PROTEIN (TIR-NBS-LRR CLASS), PUTATIVE-RELATED 1193 1487 - -
Tsu05g03464 1635 SUPERFAMILY Toll/Interleukin receptor TIR domain 501 652 IPR035897 -
Tsu05g03464 1635 Gene3D - 841 926 IPR042197 -
Tsu05g03464 1635 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 674 936 IPR027417 -
Tsu05g03464 1635 PRINTS Disease resistance protein signature 708 723 - -
Tsu05g03464 1635 PRINTS Disease resistance protein signature 1212 1228 - -
Tsu05g03464 1635 PRINTS Disease resistance protein signature 784 798 - -
Tsu05g03464 1635 PRINTS Disease resistance protein signature 876 890 - -
Tsu05g03464 1635 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN 14 262 IPR044974 GO:0006952
Tsu05g03464 1635 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN 1193 1487 IPR044974 GO:0006952
Tsu05g03464 1635 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN 514 1218 IPR044974 GO:0006952
Tsu05g03464 1635 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN 399 506 IPR044974 GO:0006952
Tsu05g03464 1635 Pfam NB-ARC domain 692 923 IPR002182 GO:0043531
Tsu05g03464 1635 Pfam NB-ARC domain 157 271 IPR002182 GO:0043531
Tsu05g03464 1635 Gene3D Ribonuclease Inhibitor 374 500 IPR032675 -
Tsu05g03464 1635 Gene3D Ribonuclease Inhibitor 1190 1264 IPR032675 -
Tsu05g03464 1635 Gene3D Ribonuclease Inhibitor 1009 1189 IPR032675 -
Tsu05g03464 1635 SUPERFAMILY L domain-like 981 1421 - -
Tsu05g03464 1635 SUPERFAMILY "Winged helix" DNA-binding domain 288 389 IPR036390 -
Tsu05g03464 1635 ProSiteProfiles TIR domain profile. 510 678 IPR000157 GO:0007165
Tsu05g03464 1635 Pfam TIR domain 512 686 IPR000157 GO:0007165
Tsu05g03464 1635 Pfam TIR domain 13 139 IPR000157 GO:0007165
Tsu05g03464 1635 ProSiteProfiles TIR domain profile. 1 127 IPR000157 GO:0007165
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tsu05g03464 Tsu-Chr5 46070912 46086693 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tsu05g03464 376 502 WRKY Transcription Factor Family AT4G12020 39.370 2.63e-15 80.1
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu05g03464 - - vra:106763277 1540.78