Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu05g03460 ATGGAATACCTTTATGGATTTGCGTCTGCTATTTCAAGAGATTTAGTGTGTGGTGTAATAGGTCAATTAAGTTATCCATGCTGCTTCAACagttttgttcaagaccttgcAAAAGAAGAAGGTAATTTGGCTGCAACAAGAGATAGTGTCCAAGACCGCGTTACACGTGCTAGGAAGCAAACTCGAAAGACTGCTGAAGTTGTTGATAAGTGGCTGAAGGAAGCTAACATTGGCATGGACAATGTTGATCAGTTACTACAAATggcaaaaacagaaaagaacTCGTGTCTTGGGCACTGTCCAAATTGGATTTGGCGATACCGTGTAGGCAGGAagttagcaaagaaaaaaaGGGACCTTAAATTGTGCATTGAAGAAGGTAGACAATATATACAGATTGAACGCCCTACTTCACTTCCAGCAGGCTATCTTTCTTATGAAAAATGTTGGGAGTTTGATAGTAGAAAACCTGCTTATGAGGAACTTATGTGTGCTTTGGAAGATGATGATGTTACTATGATTGGATTGTATGGGATGGGGGGTTGTGGTAAAACAATGCTTGCAATGGAAGTAGACAAGAGATGTCGTCATCTTTTTGATCAAGTGGTTTTTGTGACTATATCTAGTACTGTAGACTTGGAAAGGATCCAGGAAAAAATCGCAGGCTCTCTTGAATTTGAATTCCAAGAAAAAGACGAAATGGACAGGTCGCAACGCTTATGCATGAGGTTCACACAAGAAGACAGGGTTCTTGTGATTCTGGATGATGTGTGGCAGATGCTAGATTTTGATGCCATAGGGATTCCTTCTAGTGAACATCATAAAGGTTGCAAAGTTCTCATTAGCAGTAGATCTGAAGCAGTTTGTACTTTGATGGATTGCcagaaaaaaattcatctatCAACACTAACCAACGATGAAACATGGGATCTTTTCCAAAAGCAAGCACTAATATCTGAAGGAACTTCGATTACCGTGAAGAATTTGGCTAGAGAAATTTCAAATGAATGTAAAGGTTTGCCTGTCGCCATTGTAGCAGTGGCTAGCAGCTTGAAAGGTAAAGCTGAGGTGGATTGGAAGGTTGCATTGGATAGATTAAGAAGTTCGAAACATGTTAATATTGAAAAAGGTTTGCAAAATCCGTACAAGTGCTTGCAGTTAAGCTATGATAATTTGGACACTGAAGAGGCCAAGTCACTTTTCTTGTTGTGTTCTGTGTTTCCTGAAGATTGTAAAATTCCTGTGGAGTTTTTAACTAGGTCTGCAATAGGGCTAGGCATAGTTGGAGAAGTTCACTCATATGAAGGGGCAAGGGCCGAAGTGAGTGTGGCTAAAAATAAGCTCATAAGTTCTTGTTTATTGCAAGATGTTGATGAAGGAAAATGTGTCAAAATGCATGATTTAGTTCGCAACGTAGCTCATTGGATTGCAGCGAACGAGATTCAGTGTTCCTCAGAAAAGGATACTATAACTTTGAAACATAATTCATTAAGATATCTATGGTGTGAGAAATTTCCAAATCACTTGGATTGTTCCAATCTTGACTTTCTACACATTCACATATATACGCAAGACGTATCAGATGAAATTTTCAAAGGAATGAGAATGCTCAGAGTTTTATTTCTTTACAATAAGGGTCAGGAGAGAAGGTTGTTGTTGACTACATCATTAAAATCATTGAAGAATCTTCGTTGCATACTCCTGAGTAAATGGGATTTAGTTGATATATCATTTGTGGGAGATATGAAGAAACTTGAAAGTCTTACATTGTGTGATTGTTCGTTCCTTGAATTACCTGATGTGGTTACACAACTGAGTAACTTGAGATTGTTGGATTTGTTAGAATGTGACATGAAAATGAATCCGTTTCATGTGATTGGGAGACACGCACATCTGGAAGAACTGTACTTTGCTGACTGTAGATCGAAATGGGAAGTTGAATTCTTAACAGAGTTTAGTGTCCCCCAAGTGTTACAGAGGTATCAAATACAGTTCGGACGCATGTTTTCCGGTTCGCAAGAAGAGTCTCTCAATCATCACAGAACTTTGTTTCTCAGTTATTTGGATACATCTAATGCTGCAATCAAGGATTTGGCCGAAAGGGCAGAGGTTTTGAGTATAGCAGGTATCAAGGGTGGTGCTAAAAGTATCATCCCTGACATATTTCAAAGTATGAACCATTTAACTGAGCTTTTGATATGCGATTCTAATGGGATAGAGTGTTTGGTTGACACTTGTCTGATCGAGGTAGGAACTCTCTTCTTCAGCATGTTGCATTGGCTGAGAATTGATCACATGGAGCATTTGAGAGCTTTATACAATGGTGGAATGCCTCTAGGTGGTCATTTTGAGAATTTAGAAGACCTATGTATAAGCCATTGTCCAAAGCTAACATGTCTCTTCACACTTGCAGTTGCTCAAAATTTGGCAAAGCTAGAGAAATTACAAGTATTATGTTGCCCTGCACTGAAGCatatattaattgatgatgatgatagagaGGAGATAAGTGTATATGATCACAGACCATTGTTTCCAAAATTAAAAGAGCTTCGTGTTAGAGAGTGTAGCGAGTTGGAATACATAATCCCAATCACCTTAGCTCAAGGCCTTGTACAATTGGAGTGTTTGGAAATCATTTGTAATCATAAGTTGAGATACGTATTTGGCCAAAGCACACACAAAGATGGTCAGAATCAAAATGAAGTCCAGATCGAGCTGTCGGCCCTTGAAGAGCTTACTCTTGTTATCTTGCCAAATATCAATAGCATTTGTCCAGAAGATTGTTATCTAATGTGGCCATCCTTGCTTAGATTCAATTTGCAAAATTGTGGAGAGCTTTGCATGGTGTCTATCAATTCTTGCATGGCTTTGTACAACAATCCGATAATCAGTGAAGCCTCACATCCAACTgtacaaaatataaaagaagTTCGAGTCAATAACTGTGAGTTAGAAGGTATCTTTCAGCTAGTAGGACTACCCATTGATGGAGAAAAAGATCAACTGATGTCATGTTTGGAAATGTTGTATTTGGAGAATCTACCTCAGCTTAGGTATGTATGTAAGAGTAAGGTAACAAACATCCAATtccaaaatcttcaaaaaatggAGATATGTGGATGTAGAAGATTAAAATGTATCTTCTCATCCTGCATGGTTGGAGGGCTACCTCAACTGAAAGCGCTAAAGATAGAAAAGTGCAATCAGCTGGATCAAATCGTTGAGGATATTGGCACTGCAATTCCCTTTGGATCATTTGGTCTTCCCAGCCTTTTAAGGTTAACACTAATATCATGTCCGATGCTCGGTTCATTGTTCACAGCATCAACTGCTAAAACCTTGACTTCATTGGAAGATTTCACAATACAAGATTGCCATGGTTTAAAGCAATTAGTAACTTATGGAAGAACTCAGCAAAATAGAAGGGGAGCAATAGTTCAGGATGATCTTCATGACTTTCAGAGTTATGCGTCAATgttccaaagtttgaaaaggaTTAGTATTATGAGATGTCATTTGCTCAAGTGTATATTACCCGTTTCATTTGCAAGAAAACTGGTGAAATTGGAAGCTATTGAAATCACAGACACTCCTGAGTTGAGATTTGTATTTGGTCATTCTTCCCATCAATATCCAACCAAGTTCAAAATTGAGCTTCCTGCTTTGGAAAAAGTAGCACTCTACGGTATACCAAATATGATCGCCATTTGTCCAGAAAACTACCATGCAACATGCTCATCTTTGCAATTTCTTGTCATGAATGATGTTGTATCAATGAATAATTTCATTGTTAATTCTGGAGCCACACACTCAGATCTTAGTTCTAATAAAACAGATGAAGGAGAAACAAGTATGCGTATTGAGAAGAAGTTAATATCTGTTTTTATTGAGAATGGATTCGAAATTGAAGGCATTTTTCAAATGAAGGGATCCCCAAGTGAGAATGGACAACAAGTGATGTCTTGGTTAGAAGACCTTAAATTGAACAATTTGCCAAAGCTAATGTACATATGGATGGGTGCCAAACAACACTGTGTGAGCCTTCAACATCTTCACAAAATACACATTTGCAATTGTCCAACACTAAAATCTATCTTCTCCATGTCTGTCTTGAGAGTCTTGCCTCTGTTGAAGATCCTAGTGGTAGAAAAATGTGAGGAGTTGGAGCAAATCATTgtagatgaagaagaaaatgaaaatgtccCGAATCCTCAAGTGTGCTTCTCACAGCTAAAGTTTCTTCTTGTCGCACGCTGCAACAAATTGAAGCATTTGTTTTATATCAACACATCCGATGAGTTTCCAGAACTGGAATATCTGACCCTCAATCAAAATTCTAGTCTAGTTCAAGTGTTTAAAGTTGGTTCTGGTGTGCGAGAAGAGACAGCGGAAGTTTTGCTTCCAAAACTGAAACATGTTATGCTAATGCAACTGCCAAATCTCAATAATATATGTCAAGGGATTGAGTTTCAGACTCTCACCAATCTTTTGGTGCACAATTGCCCAAAATTCTCACTAACTTCAACGACTACTAACGAGGACATGCTACAAACCTGTGATAGCGTACAATCTGATATTTTAGACGAGGAAATTGGTTTCTATCTCCGTCCACACTTACACGACATAAGTTGTACAACAACAAATGGCCATGAGTTCCTTACatcaaagaacaaaaacaaagggACAACAGATTTACAATCACAGGAGCAGAAACTGTCACTCATTCCTTTACCAAATTTGTCAGAGAGGGTTAATGAAGAGGAAACAGCATCAAAGAATACGGATATAGTAGCTTCGTCAATTCATTCTGAATCTGATAGCTCACATTCAAGCCCGTTAGCTACCTCTCATCGTTGGTCACATCCACATTTTGAAATCAGCTTCAGCCAAACTGAGAGTTACactaataaagaaaacaaagaccATCCTGTAAATATAGGTGACTTGGAAGACAATGATCTCAAACctgttgaagaagatgatgaaagtCAAATAGCCACGCCTTGTGTTTCTGAAGCGACTGCAGTGTGTCATTCAACCGAAGATAACTTCGTTGCAAAGGCTCTTTCTGACCTTGAAGAGTCTTTGAGGATACCTCTAAGGGACATAGCTAGCTCAGAGGCTAACAGTCTTCGCCTTCTAACGGCTCTTAACTTCTTGTCCCACCTTTCTTTAAAAGATGTAGCTCTATCAGATGGACTCCAATCTGTAATCGACACTATGCACTCAGAATTCCCAACCATCCTACGCTCCTTCAAGCAAGCCTTTTCTATCACAGACAAATTTGCCGTGACTGAAGCTCATCACGACAAGGTAGCTATTACTCTTGCTTCCAAAATTTCCAACGCGGAAAGTTTCTTGGATGAAGCTCGACAGAGGGAAGCAGCTTTAAAGGAACAAATCATTCAATTGGAGAAAGAAGTAAACTGTCTTcaagaggaaaaggaaaaatgcaTTCAAGAAACTCTAGGCTACAAAATGGAGTTGGAGAATGTGATGAAAGACAAGTATGAAATTGTGGAAGATCAAATAAAAGCTCGGCAACAAATATTTGAGGTCGATTATAAATGGTCTGCTCTACTTAGTCAGTTTCAGTACAACCACATTGTTGCAAGAAATCCTTCTTGA 5631 0.3706 MEYLYGFASAISRDLVCGVIGQLSYPCCFNSFVQDLAKEEGNLAATRDSVQDRVTRARKQTRKTAEVVDKWLKEANIGMDNVDQLLQMAKTEKNSCLGHCPNWIWRYRVGRKLAKKKRDLKLCIEEGRQYIQIERPTSLPAGYLSYEKCWEFDSRKPAYEELMCALEDDDVTMIGLYGMGGCGKTMLAMEVDKRCRHLFDQVVFVTISSTVDLERIQEKIAGSLEFEFQEKDEMDRSQRLCMRFTQEDRVLVILDDVWQMLDFDAIGIPSSEHHKGCKVLISSRSEAVCTLMDCQKKIHLSTLTNDETWDLFQKQALISEGTSITVKNLAREISNECKGLPVAIVAVASSLKGKAEVDWKVALDRLRSSKHVNIEKGLQNPYKCLQLSYDNLDTEEAKSLFLLCSVFPEDCKIPVEFLTRSAIGLGIVGEVHSYEGARAEVSVAKNKLISSCLLQDVDEGKCVKMHDLVRNVAHWIAANEIQCSSEKDTITLKHNSLRYLWCEKFPNHLDCSNLDFLHIHIYTQDVSDEIFKGMRMLRVLFLYNKGQERRLLLTTSLKSLKNLRCILLSKWDLVDISFVGDMKKLESLTLCDCSFLELPDVVTQLSNLRLLDLLECDMKMNPFHVIGRHAHLEELYFADCRSKWEVEFLTEFSVPQVLQRYQIQFGRMFSGSQEESLNHHRTLFLSYLDTSNAAIKDLAERAEVLSIAGIKGGAKSIIPDIFQSMNHLTELLICDSNGIECLVDTCLIEVGTLFFSMLHWLRIDHMEHLRALYNGGMPLGGHFENLEDLCISHCPKLTCLFTLAVAQNLAKLEKLQVLCCPALKHILIDDDDREEISVYDHRPLFPKLKELRVRECSELEYIIPITLAQGLVQLECLEIICNHKLRYVFGQSTHKDGQNQNEVQIELSALEELTLVILPNINSICPEDCYLMWPSLLRFNLQNCGELCMVSINSCMALYNNPIISEASHPTVQNIKEVRVNNCELEGIFQLVGLPIDGEKDQLMSCLEMLYLENLPQLRYVCKSKVTNIQFQNLQKMEICGCRRLKCIFSSCMVGGLPQLKALKIEKCNQLDQIVEDIGTAIPFGSFGLPSLLRLTLISCPMLGSLFTASTAKTLTSLEDFTIQDCHGLKQLVTYGRTQQNRRGAIVQDDLHDFQSYASMFQSLKRISIMRCHLLKCILPVSFARKLVKLEAIEITDTPELRFVFGHSSHQYPTKFKIELPALEKVALYGIPNMIAICPENYHATCSSLQFLVMNDVVSMNNFIVNSGATHSDLSSNKTDEGETSMRIEKKLISVFIENGFEIEGIFQMKGSPSENGQQVMSWLEDLKLNNLPKLMYIWMGAKQHCVSLQHLHKIHICNCPTLKSIFSMSVLRVLPLLKILVVEKCEELEQIIVDEEENENVPNPQVCFSQLKFLLVARCNKLKHLFYINTSDEFPELEYLTLNQNSSLVQVFKVGSGVREETAEVLLPKLKHVMLMQLPNLNNICQGIEFQTLTNLLVHNCPKFSLTSTTTNEDMLQTCDSVQSDILDEEIGFYLRPHLHDISCTTTNGHEFLTSKNKNKGTTDLQSQEQKLSLIPLPNLSERVNEEETASKNTDIVASSIHSESDSSHSSPLATSHRWSHPHFEISFSQTESYTNKENKDHPVNIGDLEDNDLKPVEEDDESQIATPCVSEATAVCHSTEDNFVAKALSDLEESLRIPLRDIASSEANSLRLLTALNFLSHLSLKDVALSDGLQSVIDTMHSEFPTILRSFKQAFSITDKFAVTEAHHDKVAITLASKISNAESFLDEARQREAALKEQIIQLEKEVNCLQEEKEKCIQETLGYKMELENVMKDKYEIVEDQIKARQQIFEVDYKWSALLSQFQYNHIVARNPS 1876
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu05g03460 1876 SUPERFAMILY L domain-like 1157 1493 - -
Tsu05g03460 1876 SUPERFAMILY RNI-like 675 951 - -
Tsu05g03460 1876 Coils Coil 1781 1822 - -
Tsu05g03460 1876 MobiDBLite consensus disorder prediction 1636 1652 - -
Tsu05g03460 1876 Gene3D Ribonuclease Inhibitor 973 1142 IPR032675 -
Tsu05g03460 1876 Gene3D Ribonuclease Inhibitor 1219 1455 IPR032675 -
Tsu05g03460 1876 Gene3D Ribonuclease Inhibitor 672 899 IPR032675 -
Tsu05g03460 1876 MobiDBLite consensus disorder prediction 1556 1594 - -
Tsu05g03460 1876 MobiDBLite consensus disorder prediction 1631 1652 - -
Tsu05g03460 1876 Pfam NB-ARC domain 165 391 IPR002182 GO:0043531
Tsu05g03460 1876 PRINTS Disease resistance protein signature 603 619 - -
Tsu05g03460 1876 PRINTS Disease resistance protein signature 173 188 - -
Tsu05g03460 1876 PRINTS Disease resistance protein signature 244 258 - -
Tsu05g03460 1876 PRINTS Disease resistance protein signature 337 351 - -
Tsu05g03460 1876 PANTHER DISEASE RESISTANCE RPS5-LIKE PROTEIN 1088 1401 - -
Tsu05g03460 1876 PANTHER DISEASE RESISTANCE RPS5-LIKE PROTEIN 783 1076 - -
Tsu05g03460 1876 PANTHER DISEASE RESISTANCE RPS5-LIKE PROTEIN 31 741 - -
Tsu05g03460 1876 Gene3D - 302 387 IPR042197 -
Tsu05g03460 1876 Gene3D Ribonuclease Inhibitor 471 658 IPR032675 -
Tsu05g03460 1876 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 152 404 IPR027417 -
Tsu05g03460 1876 Gene3D - 388 470 IPR036388 -
Tsu05g03460 1876 MobiDBLite consensus disorder prediction 1556 1576 - -
Tsu05g03460 1876 Gene3D - 145 299 IPR027417 -
Tsu05g03460 1876 PANTHER - 1088 1401 - -
Tsu05g03460 1876 PANTHER - 783 1076 - -
Tsu05g03460 1876 PANTHER - 31 741 - -
Tsu05g03460 1876 SUPERFAMILY L domain-like 464 1133 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tsu05g03460 Tsu-Chr5 46040266 46049730 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tsu05g03460 170 640 WRKY Transcription Factor Family AT5G45050 23.034 2.45e-09 60.8
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu05g03460 - - cam:101501248 2908.24