Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu05g03433 ATGGGAACTCTTTCGCTTCTTCACAATCCAAACCTCTACTCACACTTCCGAAACCCTAATTTCTCACCTCCTTCTTCCCTTTCTCTCAAATCTCCAATTCGCACCAACTCCCGCTCAAAATCCACCCACATTCCCGCTCTTTCTTCATCAACTCCAATTCGCATCAAACTCGCCACAAAAATCGAAGCACAGCGTGCCCTAATGGATTACCTTGGCTTCACTCGAAATTACACTTTCATAGATGCAGAATTCATCACCATAAACTCTCCACATTTCATCGATAACCTTATCTCCAAGATCAACATTAAAAACGGTAATGTTTTTCGTTCTCTCCAGAGGTATTTTACGTATAATCCTATTAACGAATTTGAACCCTTTTTAGAGAGTTTAGGTATTAAACAAAGGGAATTGCAATTATTTCTCCCTAAAGGTTTGAATTTTCTTAGTGATGATAGTCGTTTGGTTGATAATTTTCATGTATTGTATAATCATGGTGTTCCGAGGAATAGAATAggtaaaatttataaagaagCAAGAGAGGTTTTTCGGTATGATAATGGTGTTTTGGCAAAGACATTTAGAGATTATGAAGATTTGGATTTGAGTAAATCTTCTTTTATCAAGCTTGTTGTTTGTTGTCCATTGCTTTTGGTTGGTGATGTTGATTCTGATTTTGTTGCTGTTCTTGATTGA 693 0.3608 MGTLSLLHNPNLYSHFRNPNFSPPSSLSLKSPIRTNSRSKSTHIPALSSSTPIRIKLATKIEAQRALMDYLGFTRNYTFIDAEFITINSPHFIDNLISKINIKNGNVFRSLQRYFTYNPINEFEPFLESLGIKQRELQLFLPKGLNFLSDDSRLVDNFHVLYNHGVPRNRIGKIYKEAREVFRYDNGVLAKTFRDYEDLDLSKSSFIKLVVCCPLLLVGDVDSDFVAVLD 230
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu05g03433 230 MobiDBLite consensus disorder prediction 24 45 - -
Tsu05g03433 230 Pfam mTERF 118 221 IPR003690 GO:0003690|GO:0006355
Tsu05g03433 230 Gene3D Transcription termination factor 3, mitochondrial 98 229 IPR038538 -
Tsu05g03433 230 PANTHER CGI-12 PROTEIN-RELATED 40 230 IPR003690 GO:0003690|GO:0006355
Tsu05g03433 230 PANTHER MITOCHONDRIAL TRANSCRIPTION TERMINATION FACTOR FAMILY PROTEIN 40 230 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tsu05g03433 Tsu-Chr5 45728017 45728709 Proximal
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR mTERF Tsu05g03433 mTERF 3.1e-06 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu05g03433 - - gmx:100803162 223.402