Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu05g03429 ATGAGGCTTATATGCATATTCATAGCATTGCTAATATTGATAACACAAATTATCATGGTGACTTGCAAGACTAGAAATCATGTACCAGCAGTAATTGTGTTTGGTGACTCTACTGTTGATTCTggaaacaacaataaaatagCAACACTTCTCAAGAGCAACTTTAAACCTTATGGCCGCAATTTTGAAGGTGGTCGCCCTACCGGACGGTTTTGTAACGGTCGTCTTCCATCGGACTTCATTGCTGAGGCTTTTGGTGTTAAGAAAAATATACCGGCATATTTGGATCCTGCTTATACTATTGATGATTTTGTCACTGGTGTTTGCTTTGCTTCAGCTGGAACTGGATATGATAATGCAACTTCTCATTTgctaAATGTGATACCTCTATGGAAGGAGATAGAGTTCTTCAAGGAGTATCAAGAAAAATTGAGAATCCATGTTGGGAAAGAGAAGGCAAATTATATAATAAGTGAAGCATTATACCTAATAAGCTTAGGAACCAATGATTTTCTTCTAAACTACTATATTTCACCAACTAAACAACTTCATTTCACCGAATCACAATATCAAGATTTTCTAGTGGATATTGCTGAAAATTTTGTTAGGAAAATATATTCACTTGGTGCAAGGAAATTATCCATAACTGGTCTTGTTCCTATTGGGTGTGTCCCATTAGAGAGGACCATAAATATTTTTGGTGACCATGATTGCAATGAAAAATACAACAATGGTGCTTTAGAATTTAATGCCAAATTGGAGAACATGATATCAAAGGTAAATAAGGAGCTCCCACAATTAAAGGCTTTGTCAGCAAATGCTTATGATATTGCCAATGATATCTTTACAAGACCTTCCTTCTATGgATTTGAGGTGGTAGAGAAGGCATGTTGTTCAACTGGAACAATTGAGATAAGCTACTTATGCAGTGATAAAAGTCCATTTACATGCAAAGATGCAAACAAATATGTGTTTTGGGATTCCTTTCATCCTACTGAGAAGACAAACCGCATAGTTTCCAATTATTTAATTCCTAAACTTCTAGCAGCTTTTAGATGA 1059 0.3484 MRLICIFIALLILITQIIMVTCKTRNHVPAVIVFGDSTVDSGNNNKIATLLKSNFKPYGRNFEGGRPTGRFCNGRLPSDFIAEAFGVKKNIPAYLDPAYTIDDFVTGVCFASAGTGYDNATSHLLNVIPLWKEIEFFKEYQEKLRIHVGKEKANYIISEALYLISLGTNDFLLNYYISPTKQLHFTESQYQDFLVDIAENFVRKIYSLGARKLSITGLVPIGCVPLERTINIFGDHDCNEKYNNGALEFNAKLENMISKVNKELPQLKALSANAYDIANDIFTRPSFYGFEVVEKACCSTGTIEISYLCSDKSPFTCKDANKYVFWDSFHPTEKTNRIVSNYLIPKLLAAFR 352
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu05g03429 352 Coils Coil 250 270 - -
Tsu05g03429 352 Pfam GDSL-like Lipase/Acylhydrolase 31 343 IPR001087 GO:0016788
Tsu05g03429 352 Gene3D SGNH hydrolase 18 349 IPR036514 -
Tsu05g03429 352 PANTHER GDSL-LIKE LIPASE/ACYLHYDROLASE 11 351 - -
Tsu05g03429 352 PANTHER GDSL ESTERASE/LIPASE EXL3 11 351 - -
Tsu05g03429 352 CDD SGNH_plant_lipase_like 29 346 IPR035669 -
Tsu05g03429 352 SUPERFAMILY SGNH hydrolase 31 347 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tsu05g03429 Tsu-Chr5 45697851 45702094 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tsu05g03429 4 344 Pollen Coat Proteome AT1G75910 35.362 3.13e-66 211
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu05g03429 - - gmx:100805486 564.688