Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu05g03428 ATGAGGTTTATATGCATATTCATAGCTTTTATAATATTGATAACACAAATTATCATGGTATCTTGCAAGACTAGAAATCATGTACCAGCAGTAATTGTGTTTGGTGATTCTTCTGTTGATTCCGGAAACAACAATAAGATAGCAACACTTCTCAAGAGCAACTTTAAACCTTACGGTCGTGACTTCGAAGGTGGTCGCCCCACTGGACGGTTTTGTAACGGCCGTATTCCACCGGACTTCATTGCCGAGGCTTTTGGTGTTAAGAAAAATATACCGGCATATTTGGATCCTGCTTATACCATTGATGATTTTGTCACTGGTGTTTGTTTTGCTTCCGCTGGAACTGGATATGATAATGCAACTTCTGATGTACTAAATGTGATACCACTGTGGAAGGAGATAGAGTACTTCAAAGAGTATCAAGAAAAATTGAGAGCTCATGTTGGTAAAAAGAAGGCAAATTATATAATTAGTGAAGCATTATACCTAATAAGCTTAGGAACCAATGATTTCCTTGAAAACTACTACATTTTCCCAACAAGACAAATTCATTTCACTGAATCACAATATCAAGATTTTCTAGTGGATATTGCTGAAAATTTTGTTAGGAAAATATATTCACTTGGTGCTAGGAAATTATCCATAACTGGCCTTATTCCTATGGGGTGTCTCCCATTAGAGAGGgcaacaaatatttttggtgACCATGATTGCAATGAAAAATACAACAATGTGGCTAAGCAATTTAATGTCAAATTGGAGAATATGGTATCAAAGATAAGTAAGGAGCTCCCACAATTGAAGGCTTTGTCGGCAAATCCTTATAATATTTTCTATGATATCATTACAAGACCTTCCTTCTATGgATTTGAGGAGGCAGAGAAGGCATGTTGTTCCACAGGGACATTTGAGATGAGCTACTTATGTAGTGATAAGAATCCATTTACATGCAAAGATGCTAACAAATATGTGTTTTGGGATGCATTTCATCCTTCTGAGAAAACAAACCGCATAGCTTCAAATCATTTAATCCCTAGACTTCTATCAACTTTTAGATGA 1059 0.3551 MRFICIFIAFIILITQIIMVSCKTRNHVPAVIVFGDSSVDSGNNNKIATLLKSNFKPYGRDFEGGRPTGRFCNGRIPPDFIAEAFGVKKNIPAYLDPAYTIDDFVTGVCFASAGTGYDNATSDVLNVIPLWKEIEYFKEYQEKLRAHVGKKKANYIISEALYLISLGTNDFLENYYIFPTRQIHFTESQYQDFLVDIAENFVRKIYSLGARKLSITGLIPMGCLPLERATNIFGDHDCNEKYNNVAKQFNVKLENMVSKISKELPQLKALSANPYNIFYDIITRPSFYGFEEAEKACCSTGTFEMSYLCSDKNPFTCKDANKYVFWDAFHPSEKTNRIASNHLIPRLLSTFR 352
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu05g03428 352 SUPERFAMILY SGNH hydrolase 31 348 - -
Tsu05g03428 352 ProSiteProfiles Prokaryotic membrane lipoprotein lipid attachment site profile. 1 22 - -
Tsu05g03428 352 CDD SGNH_plant_lipase_like 29 345 IPR035669 -
Tsu05g03428 352 Gene3D SGNH hydrolase 18 348 IPR036514 -
Tsu05g03428 352 Pfam GDSL-like Lipase/Acylhydrolase 31 342 IPR001087 GO:0016788
Tsu05g03428 352 PANTHER GDSL-LIKE LIPASE/ACYLHYDROLASE 10 351 - -
Tsu05g03428 352 PANTHER GDSL ESTERASE/LIPASE EXL3 10 351 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tsu05g03428 Tsu-Chr5 45682802 45689801 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tsu05g03428 4 344 Pollen Coat Proteome AT1G75910 36.599 1.01e-67 214
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu05g03428 - - gmx:100805486 585.489