Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu05g03424 ATGGGTTTCACTGTTGGGTTAGTAAGAAATGTCTTCTCAAGAAATCATGCTATTAGGTCTCATGAAAGAAAAATAATGAGACGAAATTCTTCCGAAAATCGAAGATGGATATCTGTTAAGTCATATTTATGTGGCAATGAATTCAATTCAGTTCTTGCTGAGGAGGATTCAGCATCAATTAAGAACTCTGAAGTCACAGTTACTCAATCCATAGAAGAAGATTTGTTGAGTGATAAAGGAGAAACCAAGAGTGAAGAAACTGTTGAGAATGTAATAGAGAAAAGTactaattcaaatttcaaatcatTGAATGAAGAAGAAGCAGCTATTATTATTCAATCAGCATATAGAAGTTTCAAGTTGAGGTGTAAAAATGAACAAATCAGAAGATCAGAAACTGATGAAGAGAAGTTGAATTTAGTAACAGAAAGTCCAGATAGAAAATCTATGGCCACATCAGTTGAAGTACAAACAGGAAATTCCATTGAAATTTTCTCACTTGAAGGAGAAAAAATGAGCATTTACAACAGAATTCAGAACAGAAACAGAACAAGAGCAATAAAGCAAAAGGAAGATTGGGATGATAGTACTGTGAGTAGCAATGTCTCAAAAATGAGGATGCAGAACAGAATGGAGGCATCAACAAGGAGAGAAAGAGCATTGGCTTATGCCTTCTCACAAcagCTAAGAATATGTTCAAAGAGAAAATTAGCAAAACATGAAAACAACATGGAACAAAATATGAGTTGGAGTTGGCTTGAAAGATGGATGGCAACTAGACTTCAAGACACTTCATCAGTTGAAAGCCATGCTATGAATCAGTATGAAAATTTCAACACTGATGAGCATCACAAATTAACTATAAAAACAAGATTTATAGATGCTTCTGGtggtgaagaaaaagagagtTGTGGATCAAATGAAGTGCCACTTCATTTTgataattattcaataaattcaCAAGATGATAAAGTTAGCAGCTTCAAATTACCAACAACAAAGACTAATTTTAAAGCTAGGAGAAGAACTGTGTCTAGAAGGAAAACTGTACCAAGTTATCAATTCCATGATGAGAATCCTAAGgTGAGCATTAAAGATGGTTCAAGCAATGCTATTAAGGATATTAAGCAAAAACCAAAGCAAGATGGAAGCAAGACAGAAATAAGTCAAATTACAATTAACACCCCCAAAACTTCTAATGAGTAA 1206 0.3242 MGFTVGLVRNVFSRNHAIRSHERKIMRRNSSENRRWISVKSYLCGNEFNSVLAEEDSASIKNSEVTVTQSIEEDLLSDKGETKSEETVENVIEKSTNSNFKSLNEEEAAIIIQSAYRSFKLRCKNEQIRRSETDEEKLNLVTESPDRKSMATSVEVQTGNSIEIFSLEGEKMSIYNRIQNRNRTRAIKQKEDWDDSTVSSNVSKMRMQNRMEASTRRERALAYAFSQQLRICSKRKLAKHENNMEQNMSWSWLERWMATRLQDTSSVESHAMNQYENFNTDEHHKLTIKTRFIDASGGEEKESCGSNEVPLHFDNYSINSQDDKVSSFKLPTTKTNFKARRRTVSRRKTVPSYQFHDENPKVSIKDGSSNAIKDIKQKPKQDGSKTEISQITINTPKTSNE 401
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu05g03424 401 ProSiteProfiles IQ motif profile. 105 134 IPR000048 GO:0005515
Tsu05g03424 401 PANTHER IQ-DOMAIN 33 1 379 - -
Tsu05g03424 401 MobiDBLite consensus disorder prediction 384 401 - -
Tsu05g03424 401 MobiDBLite consensus disorder prediction 376 401 - -
Tsu05g03424 401 PANTHER IQ-DOMAIN 5-RELATED 1 379 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tsu05g03424 Tsu-Chr5 45656542 45661780 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tsu05g03424 1 354 IQD Protein Family AT5G35670 39.952 7.73e-77 243
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu05g03424 - - mtr:MTR_5g084680 671.389