Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu05g03412 ATGCTTCATGCAAAGAAATTACCATACTCCTTCTGGGCTGAGGCCATGAATACAACCTGCTACATCCACAATAGAGTTACGTTAAGGACTGGAACCACTTCCACCttatatgaactatggaaaaaCAGAAAACCTACTGTTAAGTACTTTCATGTTTTTGGGAgcaaatgttatatattaacTGATAGAGAACATAGAAGGAAGTTAGATCCTAAAAGCGATGAGGGGATTTTTCTGGGATACTCTTCAAACAGTAGAGCTTACAGGGTATACAACTCTAGGACTAAGGTCATAATGGAATCAAGTAATGTGGTAGTAGATGATTCAGCAGAAGAAAGATCGACAGATGTGGCAGatgatgctatagcatctgacATACAGTCTGATGAACCTGATATAGTGGAAGAAGTTGAAAACAGTATAGAAAGCTCTAAGCTTGATCCTACCAGTATTTATCCTACCAATGATCCACCAAAGAAAGGTCCTTCCATCAGAGTTCAGAAAAACCATCCTCAGGAACTCATCATTGGTGATCCAGAGACTGCTGATCTCGAAGCTTCTGGGAATATTTCTATAACCTATGGCCGAAGATATTCTTCAAATAAAAGGAACGACAAAGAGAAGGAAGTGGGCATTCCTACACGTAAAAGGAAGGATAATGATGTGGGCATTCAACAACAATGTCTAAAAGATCCCAACTCATTCGAAAACCTAACAGTGGAATCTGAACAAATACGAAAGCTCACATGCAGAACTCCATTCACTGAATGCCCCAATACTTCTACTCCCGAGATTGTTGATCTCGAAGCTTCTGAGACGATTTCAGAAAGTAAGGATAAAGGGAAGGACACAGTCATTTCAGAAAATAGCAATTTCATCGATACATGGGAGGAAGCTGTCATTTCTGAAAGTAGCGCATCCATCAAAAGGAAGGATAAAGGGAAGGAATTTGACATTCCTTCAAGTTCCAAGTCCATTTCGAAGGTGTCCAATACTAGATGTAGAAGTCATTTCCGTAGATGTAAGATTGTATTTGGTCTGGTCTTGATGTTGAATATTAACCATGGGCTATTGTATGTTCCTTTTTGTCATCAAAATTACATAGACAAAAGTGACGGGCTCCAACGTGCAAATCCTCCCAAGGCCAAGGCATTTTCAGACCCTTGTACAAAGGGATGTGACGGTTCAGTTCAACTCGACGACACATCAAATTTTACTGGAGAGAAAACTGCAATTCCCAACAAAAATTCTGCACGTGGATTTGAAGTGATCGACCAAATCATGTCACCCGTGAAAGAAGTGTGCCCAGGTGGTCACACAATTGGACAAGCAAGATGCACTAACTTTAGAGCTCATATATACAACGACACCGACATAGATACCTCCTTTGCTCGGACAAGGCAATCAGGGTGCCCCAAGACATCAGGATCAGGAGACAATAACTTGGCACCCCTTGATCTCGTGACACCGACATCTTTCGACAACCATTACTTCAAGAACCTTGTTGATAGTAAGGGACTACTCCACTCTGACCAAGTGCTCTTCAATGGTGGATCCGCCGATTCCATAGTGCATGAATATAGCACAAATCCAAGCTCTTTTTTCTCTGATTTTATTACTGCCATGATCAAGATGGGAGACATTAGTCTTCTCACCGGCTCAAATGGAGAGATTAGAAAGAATTGCAGGCGTGCGAActaa 1701 0.4015 MLHAKKLPYSFWAEAMNTTCYIHNRVTLRTGTTSTLYELWKNRKPTVKYFHVFGSKCYILTDREHRRKLDPKSDEGIFLGYSSNSRAYRVYNSRTKVIMESSNVVVDDSAEERSTDVADDAIASDIQSDEPDIVEEVENSIESSKLDPTSIYPTNDPPKKGPSIRVQKNHPQELIIGDPETADLEASGNISITYGRRYSSNKRNDKEKEVGIPTRKRKDNDVGIQQQCLKDPNSFENLTVESEQIRKLTCRTPFTECPNTSTPEIVDLEASETISESKDKGKDTVISENSNFIDTWEEAVISESSASIKRKDKGKEFDIPSSSKSISKVSNTRCRSHFRRCKIVFGLVLMLNINHGLLYVPFCHQNYIDKSDGLQRANPPKAKAFSDPCTKGCDGSVQLDDTSNFTGEKTAIPNKNSARGFEVIDQIMSPVKEVCPGGHTIGQARCTNFRAHIYNDTDIDTSFARTRQSGCPKTSGSGDNNLAPLDLVTPTSFDNHYFKNLVDSKGLLHSDQVLFNGGSADSIVHEYSTNPSSFFSDFITAMIKMGDISLLTGSNGEIRKNCRRAN 566
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu05g03412 566 MobiDBLite consensus disorder prediction 197 223 - -
Tsu05g03412 566 Pfam Peroxidase 437 529 IPR002016 GO:0004601|GO:0006979|GO:0020037
Tsu05g03412 566 PANTHER PEROXIDASE 72-RELATED 385 437 IPR000823 GO:0004601|GO:0006979|GO:0020037
Tsu05g03412 566 Gene3D - 385 437 - -
Tsu05g03412 566 MobiDBLite consensus disorder prediction 199 223 - -
Tsu05g03412 566 Gene3D Peroxidase, domain 2 438 545 - -
Tsu05g03412 566 MobiDBLite consensus disorder prediction 123 137 - -
Tsu05g03412 566 SUPERFAMILY Heme-dependent peroxidases 384 566 IPR010255 GO:0004601|GO:0006979|GO:0020037
Tsu05g03412 566 PRINTS Haem peroxidase superfamily signature 431 446 IPR002016 GO:0004601|GO:0006979|GO:0020037
Tsu05g03412 566 PRINTS Haem peroxidase superfamily signature 486 501 IPR002016 GO:0004601|GO:0006979|GO:0020037
Tsu05g03412 566 Gene3D - 546 566 - -
Tsu05g03412 566 ProSiteProfiles Plant heme peroxidase family profile. 251 566 IPR002016 GO:0004601|GO:0006979|GO:0020037
Tsu05g03412 566 PANTHER PEROXIDASE 72-RELATED 437 564 IPR000823 GO:0004601|GO:0006979|GO:0020037
Tsu05g03412 566 PANTHER PEROXIDASE 385 437 - -
Tsu05g03412 566 PANTHER PEROXIDASE 437 564 - -
Tsu05g03412 566 MobiDBLite consensus disorder prediction 109 167 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tsu05g03412 Tsu-Chr5 45423330 45438824 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tsu05g03412 437 566 Peroxidase AT5G05340 73.077 8.45e-61 202
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu05g03412 K00430 - gmx:100803637 223.787