Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu05g03408 ATGTCTAATTCAATTTCCACTACCTCCGAAACTATTACCCCTCTTCTTCAACAAAACCACGAACAAGACTCAGTTCCACAAAATGGAACAATTTCAGGAGCAGTATTCAACATATCAACAACCATGGTTGGTGCCGGAATCATGTCGATTCCGGCAACAATGAAAGTTCTTGGAATAATTCCGGGATTAATTGTGATCGTATTGGTGGCAGTTATAACTGATTTAACTGTTGAGTTTATGTTGAGGTTTACAAGTTCTGGTAAAGCGGTTACTTATGCGGGTATGGTGGGTGAGTCTTTTGGTTCTGTTGGATCTCTTGCTGTTAAGATTTGTGTTATTACCACTAATCTTGGTGTTCTTATTgtctattttattattcttggTGATGTCCTCTGTGGAAATGAGTTCAATGGTACCACACATTTAGGTATTCTACAACAATGGTTTGGCATCCACTGGTGGACCTGTCGTGCTTTTGCTCTTCTTATTGTTGCACTCTTCATTATGCTTCCTCTAGTTATGTTACGCCGTGTAGATTCACTCAAGTATAGTTCTGCATTATCAATCGCGCTAGCACTGGTTTTTGTTGTAATATGTTCCTCAATGGCATTTCATGCATTATGGTCCGGAAAAACACAGTCGGTGAGAATATTTCCTGATTTCTCTCAAGTCACTGCCCTTGATCTTTTCACCACTGTCCCTGTTTTTGTCACAGGCTTCGGATTTCATGTTAATGTTCATCCAATTAGAGCAGAGCTTGTAAAACCATCAGACATGAGTATCGCCGTGCGACTTTCGTTATTAATCTCCGTTGCCATTTACTTTGCAATCGGATTCTTTGGATACCTATTATTCGGGGACTCAATCATGCCAGATGTGTTGATAAACTTCGACCAGAACTCTGATTCGAGTGTCGGTCGATTGCTAGATGACATTGTTCGGCTAAGCTACGCTCTCCATCTCGCACTTGTGTTCCCTATCATGTTCTATTCCTTGAGGGCCAACATTGATGAATTATTGTTCTCGAATAAAAATAACCGTCCTTTGGCTTTGGACACCACAAGATTTGTGTCACTGACTCTTGTTTTGCTAACATTCACATATTTGGTGGCTGTGGAAATTCCAAATGTTTGGTACTTTTTTCAATTCTTAGGATCTACCACCATTGTTTGCCTCTCATTCCTCTTCCCTGCCGCAATCATTCTAAGGGATACACATGGTATATCGAAAACAATAGATCAAGTAATGGCAATAGTAGTGATTATTTTGGCTGTTGGGACAAGTGGAATTGCCATATGGACCAACTTAAATGGTTCCAGTGCTGATTAA 1329 0.3973 MSNSISTTSETITPLLQQNHEQDSVPQNGTISGAVFNISTTMVGAGIMSIPATMKVLGIIPGLIVIVLVAVITDLTVEFMLRFTSSGKAVTYAGMVGESFGSVGSLAVKICVITTNLGVLIVYFIILGDVLCGNEFNGTTHLGILQQWFGIHWWTCRAFALLIVALFIMLPLVMLRRVDSLKYSSALSIALALVFVVICSSMAFHALWSGKTQSVRIFPDFSQVTALDLFTTVPVFVTGFGFHVNVHPIRAELVKPSDMSIAVRLSLLISVAIYFAIGFFGYLLFGDSIMPDVLINFDQNSDSSVGRLLDDIVRLSYALHLALVFPIMFYSLRANIDELLFSNKNNRPLALDTTRFVSLTLVLLTFTYLVAVEIPNVWYFFQFLGSTTIVCLSFLFPAAIILRDTHGISKTIDQVMAIVVIILAVGTSGIAIWTNLNGSSAD 442
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu05g03408 442 PANTHER AMINO ACID TRANSPORTER, TRANSMEMBRANE DOMAIN-CONTAINING PROTEIN-RELATED 9 440 - -
Tsu05g03408 442 PANTHER AMINO ACID TRANSPORTER 9 440 - -
Tsu05g03408 442 Pfam Transmembrane amino acid transporter protein 29 423 IPR013057 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tsu05g03408 Tsu-Chr5 45375783 45379057 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tsu05g03408 8 442 Amino Acid or Auxin Permease AAAP Family AT3G56200 50.229 1.36e-147 426
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu05g03408 - - ahf:112765408 654.825
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tsu03g01929 03 19964425 19966762 Tsu05g03408 05 45375783 45379057 PCT