Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu05g03384 ATGGACACTTCTACTACAgagaagaacaacaacaacactcaCCAAATTTTGCAACTTGGGATGAGAAATGCAGCAAAAAGACACAATTTTTACGCCAACCCACTTCATTTTTTCAGGTTATTTTTCATTTGCATCTTCTGGGTCAATTTTTTATGGCTTCCTATGAAGCCAGTTTTGTGTGAAGAGCGTTGGGATGGAGTTGTTGTAACACAGTCAAATTTCTTAGCACTTCAAGCATTCAAAGAAGAGTTAATTGATCCAAAAGGGTACTTGAAAACTTGGAATGATAGTGGCTTTGGAGCTTGTTCAGGAGCTTGGGCTGGAATCAAGTGTGCTCAAGGACAAGTTATTGTAATTCAGCTTCCATGGAAAGGATTAAAGGGTAAAATCACTGATAGGATTGGTCAACTTGAAGGTCTTAGAAAGCTTAGTCTTCATAATAATCAAATTAGTGGTTCAATCCCTTCATCATTAGGACTTTTAATCAATCTTAGAGGAGTTCAACTCTTTAATAATAGGTTAACAGGTTCAATCCCTCCTTCATTAGGTTATTGTCCTATGCTTCAATCTTTAGATTTTAGTAACAATTTGCTCACAGGTAAAATCCCTGAGAGCCTTGGAAATGCCACTAAGCTTTATTGGGTTAACATAAGTTTCAATTCATTGTCTGGTTCAATACCAACTAGTTTAACTAGTTTGAATTCTCTCACTTTCATATCTCTTCAACACAATAATCTCTCAGGTTCTATTCCTAACTCATGGGGTGGTAACTTGAAAAATGGATTCTTTAGGCTTCAAAATCTTGTATTGGATCATAATTTCTTGACTGGAACAATTCCTGCTTCTTTAGGTAACTTAAGAGAACTTAGAGAGATTTCTCTTAGTCATAACCAATTTAGTGGTCACATTCCTCAAAGTATTGGTAACATTTCAAATCTTAAGCAGCTTGATTTGTCATTGAATAATCTCAGTGGAGAAATTCCCATTTCTTTCGATAATCTTGATAGTCTTAATTTCTTCAATGTTTCTCATAATAACCTCTCTGGTCCTGTTCCAACTTTACTAGCACAGAAATTTAACTCGAGCTCGTTTGTCGGAAATATTCAACTATGTGGTTATAGTCCTTCGACTCGATGTCCCTCCGTAGCTCCTTCTGAAATACCTGCAGCACCTTCAGAAGCACCGAAACACCACCATCACAAGAAACTAGGTACCAAAGACATAATCCTCATAGTAGCAGGAGTGCTCCTTGTAGTCCTGATAATAGTCTGCTGCATCCTGCTCTTCTGTCTGCTccgaaaaagaaaaacatcGAATGCCGAGGGTGGACAGGCTACAGCGAGAGCAGCTGCTGCTGGAAGGACAGGAAAAGGAGTCCCTCCTATCGGTGGAGAAGTTGAAGCAGGAGGTGACACTGGAGGCAAACTGGTTCATTTTGACGGACCATTGGCTTTTACAGCTGACGATCTCCTGTGTGCAACGGCCGAGATAATGGGAAAGAGCACGTATGGAACAGTGTATAAGGCAACATTAGAGGACGGTAGTCAAGCTGCGGTGAAACGATTGAGGGAAAAAATCACTAAGAATCAAAGAGATTTTGAATCTGAAGTTAGTGTTCTAGGGAGAATTAGACATCCAAATCTTTTGGCAATGAGAGCCTATTACTTGGGACCTAAAGGTGAAAAGCTTTTGGTTTTTGATTACATGCCTAAAGGAAGTCTTGCTTCTTTCCTACATGCTCATGGACCTGAAATAAGAATTGATTGGCCAATAAGGATGAACATAGCACAGGGCATGGCTCGTGGCTTGTTATACCTACATTCACATGAGAACATTATACATGGGAACCTAACTTCAAGCAATGTATTGCTTGATGAGAACACAAATGCAAAAATAGCAGATTTTGGTCTATCAAGGTTGATGACAACTGCTGCTAACTCTAATGTGATTGCTACTGCCGGAGCATTAGGATACCGAGCTCCCGAGCTATCGAAGCTAAAGAAAGCAAACACAAAAACTGATGTATACAGTCTTGGTGTAATCTTGTTAGAACTCCTAACAAGGAAGCCACCTGGTGAGGCAATGAATGGTGTTGATTTACCTCAGTGGGTTGCCTCTATTGTTAAAGAGGAATGGACAAATGAAGTTTTCGATGCCGATTTGATGAGAGATCCATCAACAAATGGTGATGAATTGTTAAACACTTTGAAGCTTGCTTTGCACTGTGTTGATCCTTCTCCATCAGCACGGCCAGAAGTTCAGCTGATACTTCAGCAGCTAGAAGAGATTAGACCACAGATATCATCAGCCATTTCTAGTGATGAAGGAGCTATCCCTTCCACAAGTGAATAA 2352 0.3916 MDTSTTEKNNNNTHQILQLGMRNAAKRHNFYANPLHFFRLFFICIFWVNFLWLPMKPVLCEERWDGVVVTQSNFLALQAFKEELIDPKGYLKTWNDSGFGACSGAWAGIKCAQGQVIVIQLPWKGLKGKITDRIGQLEGLRKLSLHNNQISGSIPSSLGLLINLRGVQLFNNRLTGSIPPSLGYCPMLQSLDFSNNLLTGKIPESLGNATKLYWVNISFNSLSGSIPTSLTSLNSLTFISLQHNNLSGSIPNSWGGNLKNGFFRLQNLVLDHNFLTGTIPASLGNLRELREISLSHNQFSGHIPQSIGNISNLKQLDLSLNNLSGEIPISFDNLDSLNFFNVSHNNLSGPVPTLLAQKFNSSSFVGNIQLCGYSPSTRCPSVAPSEIPAAPSEAPKHHHHKKLGTKDIILIVAGVLLVVLIIVCCILLFCLLRKRKTSNAEGGQATARAAAAGRTGKGVPPIGGEVEAGGDTGGKLVHFDGPLAFTADDLLCATAEIMGKSTYGTVYKATLEDGSQAAVKRLREKITKNQRDFESEVSVLGRIRHPNLLAMRAYYLGPKGEKLLVFDYMPKGSLASFLHAHGPEIRIDWPIRMNIAQGMARGLLYLHSHENIIHGNLTSSNVLLDENTNAKIADFGLSRLMTTAANSNVIATAGALGYRAPELSKLKKANTKTDVYSLGVILLELLTRKPPGEAMNGVDLPQWVASIVKEEWTNEVFDADLMRDPSTNGDELLNTLKLALHCVDPSPSARPEVQLILQQLEEIRPQISSAISSDEGAIPSTSE 783
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu05g03384 783 Gene3D Transferase(Phosphotransferase) domain 1 570 777 - -
Tsu05g03384 783 Pfam Leucine rich repeat 264 323 IPR001611 GO:0005515
Tsu05g03384 783 ProSiteProfiles Protein kinase domain profile. 492 767 IPR000719 GO:0004672|GO:0005524|GO:0006468
Tsu05g03384 783 PANTHER LEUCINE-RICH REPEAT RECEPTOR-LIKE PROTEIN KINASE IMK3-RELATED 45 328 - -
Tsu05g03384 783 CDD STKc_IRAK 498 763 - -
Tsu05g03384 783 Gene3D Ribonuclease Inhibitor 73 183 IPR032675 -
Tsu05g03384 783 Gene3D Phosphorylase Kinase; domain 1 498 569 - -
Tsu05g03384 783 SUPERFAMILY L domain-like 72 371 - -
Tsu05g03384 783 Gene3D Ribonuclease Inhibitor 260 381 IPR032675 -
Tsu05g03384 783 Gene3D Ribonuclease Inhibitor 184 259 IPR032675 -
Tsu05g03384 783 PANTHER LEUCINE-RICH REPEAT RECEPTOR-LIKE PROTEIN KINASE IMK3-RELATED 45 328 - -
Tsu05g03384 783 PANTHER LEUCINE-RICH REPEAT RECEPTOR-LIKE PROTEIN KINASE IMK3-RELATED 294 774 - -
Tsu05g03384 783 Pfam Leucine rich repeat N-terminal domain 75 111 IPR013210 -
Tsu05g03384 783 ProSiteProfiles Leucine-rich repeat profile. 139 161 IPR001611 GO:0005515
Tsu05g03384 783 SUPERFAMILY Protein kinase-like (PK-like) 496 765 IPR011009 -
Tsu05g03384 783 Pfam Leucine Rich Repeat 188 208 IPR001611 GO:0005515
Tsu05g03384 783 PANTHER LEUCINE-RICH REPEAT RECEPTOR-LIKE PROTEIN KINASE IMK3-RELATED 294 774 - -
Tsu05g03384 783 MobiDBLite consensus disorder prediction 442 465 - -
Tsu05g03384 783 Pfam Protein tyrosine and serine/threonine kinase 495 760 IPR001245 GO:0004672|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tsu05g03384 Tsu-Chr5 45201429 45204417 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tsu05g03384 64 765 Receptor kinase-like Gene Family AT3G51740 57.806 0.0 831
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-III Tsu05g03384 PK_Tyr_Ser-Thr 1.4e-42 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu05g03384 - - gmx:100811174 1016.53
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tsu05g03384 05 45201429 45204417 Tsu05g03384 05 45201429 45204417 ECH