Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu05g03362 ATGAATTTAGTTCACATAAAATCTAtTATTTTAAGGAACAACTCTTTCTATGGAACCATACCTGAAGAAATTTTAAGCTTGAAAGAGTTGGAGATTTTGGATTTGGGATATAACAATTTCAGTGGAGATTTAGATGCTAATTTTGGCCATAATATTCCATCACTAGCAATTCTTTTGCTAGACAACAATGAGCTCCTTGTTGGTTTCTCTCCCAAAATCAATGAGCTGAAAATGCTTTCGGAGTGTCAAGTAGATGAAAATCGGTTAATCGATGCAGCTAAGATGCCATCTTGTTCCGAAAGATCCATCACATGGCATGTTCATGAAAATGAAGGTCCTAGGAGACTGCTACATTATCACAAACCACATCACCATTCTCATAATCATACTTCTCGTAATCATACTTCGCCTCTATATAAATTTCCTCCTTCACATTCTCCATCAGCCGCAGCAGTACCACTGGTCCCTAATCCAGCTTCAGATTCTCCTAATCGAAAAGCTCATGATTCTCCCAATCAAAATGCTTCAGATTCTCCAAATGAAAATGCTTCTGATTCTCCTAATGAAATTGCTTCTGATTCGCCAACTAAAACCACATCATCGAAGAAGAATAAAGTTCCTATTCTAGCCGGAGTCATTATTGCAGGTTGTGCTGGTTTTCTTGTGATTTCAAGCATTGGTATATATCTTTGTAAAACCAACAAAGTAGCTATTGTTAAACCTTGGACTACAGGAATAAGTGGACAACTTCAAAAAGCACTTGTCACCGGTGTGCCGAAGCTAAAGAGATCGGATCTTGAAGCAGCATGTGAAGATTTTAGCAATGTAATTGGTAATTCACCAATTGGTACATTGTATAAAGGAACTTTGTCTAGTGGAGTTGAAATTGCTGTAGCTTCTGTTTCTGTCATGTCAAAGAGTTGGACAAAGGCTTTAGAAGCACAATTTAGGAAGAAGATAGACATATTATCAAAAGTGAATCACAAGAATTTTGTCAATCTTATTGGTTATTGTGAAGAAGAAGAGCCTTTCACTAGAATGCTGGTTTTTGAATATGCTCCTAATGGAACATTATTTGAGCATTTACACGTAAAAGAAGCTGAGCACTTAAACTGGGGACCAAGACTTAGAATTGCAATTGGAATGGCTTACTGCCTACAACATATGCATGAATTGGATCCTCCTATGGTCCTTACCAACCTAAGTTCTTCCGTTGTCCACCTAACCGATGACCACGCTGCGAAAGTCTCGGATTTGAGTTTCTCCTACGAAATAGATTCATCCGAAAAGAAACCTGATGGTAAGAAACACAATGACATGATGCAATCAACAAGTCCAGCAAGTAATGTTTATAGCTTTGGTGTTTTGTTATTTGAAATAGTTACCGGTCGAATCCCTTATTCGGTTGATAATAGCTCGCACGAAAACTGGGCATCACATTATCTAAAATGGGATAAACCACTTAAAGAAATGGTGGATTCAACTCTAACATCTTACCAAGATGATCAAGTGGAACAAGTTGCTGAATTGATAAGAGTTTGTGTCGATCCGGATTCAGAGAAGAGACCGAGAATGAGTGAAGTCAGTGAGAGGTTGAGAGAGATAACGAAAATGTCGCCCGAATTTGCAGTTCCAAAACTTTCTCCGCTTTGGTGGGCTGAGATTGAGATTTCTTCAGCATAA 1683 0.3821 MNLVHIKSIILRNNSFYGTIPEEILSLKELEILDLGYNNFSGDLDANFGHNIPSLAILLLDNNELLVGFSPKINELKMLSECQVDENRLIDAAKMPSCSERSITWHVHENEGPRRLLHYHKPHHHSHNHTSRNHTSPLYKFPPSHSPSAAAVPLVPNPASDSPNRKAHDSPNQNASDSPNENASDSPNEIASDSPTKTTSSKKNKVPILAGVIIAGCAGFLVISSIGIYLCKTNKVAIVKPWTTGISGQLQKALVTGVPKLKRSDLEAACEDFSNVIGNSPIGTLYKGTLSSGVEIAVASVSVMSKSWTKALEAQFRKKIDILSKVNHKNFVNLIGYCEEEEPFTRMLVFEYAPNGTLFEHLHVKEAEHLNWGPRLRIAIGMAYCLQHMHELDPPMVLTNLSSSVVHLTDDHAAKVSDLSFSYEIDSSEKKPDGKKHNDMMQSTSPASNVYSFGVLLFEIVTGRIPYSVDNSSHENWASHYLKWDKPLKEMVDSTLTSYQDDQVEQVAELIRVCVDPDSEKRPRMSEVSERLREITKMSPEFAVPKLSPLWWAEIEISSA 560
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu05g03362 560 PANTHER PROTEIN MALE DISCOVERER 2 2 560 - -
Tsu05g03362 560 SUPERFAMILY L domain-like 2 92 - -
Tsu05g03362 560 Gene3D Phosphorylase Kinase; domain 1 244 352 - -
Tsu05g03362 560 Gene3D Ribonuclease Inhibitor 1 120 IPR032675 -
Tsu05g03362 560 SUPERFAMILY Protein kinase-like (PK-like) 256 532 IPR011009 -
Tsu05g03362 560 Pfam Protein tyrosine and serine/threonine kinase 274 532 IPR001245 GO:0004672|GO:0006468
Tsu05g03362 560 MobiDBLite consensus disorder prediction 119 202 - -
Tsu05g03362 560 MobiDBLite consensus disorder prediction 163 202 - -
Tsu05g03362 560 Gene3D Transferase(Phosphotransferase) domain 1 353 543 - -
Tsu05g03362 560 ProSiteProfiles Protein kinase domain profile. 271 542 IPR000719 GO:0004672|GO:0005524|GO:0006468
Tsu05g03362 560 PANTHER LRR RECEPTOR-LIKE KINASE 2 560 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tsu05g03362 Tsu-Chr5 45012734 45016768 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tsu05g03362 5 535 Receptor kinase-like Gene Family AT1G48480 25.593 2.69e-36 141
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-VI-2 Tsu05g03362 PK_Tyr_Ser-Thr 2.7e-26 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu05g03362 - - lja:Lj2g3v2794510.1 687.182
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tsu03g01894 03 19598420 19603015 Tsu05g03362 05 45012734 45016768 PCT