Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu05g03360 ATGGCTTCCAAAACAACCTCTTcattcttcttcctctctcttcTAGTATTTCTTTCAATACCAAACTCCGCTATTGCCTCCGATAAAATCACCGCAATCTTTGCCTTCGGTGACTCCACCATTGATGCGGGCAACAATAACCACCTAAATAGTCTCTTCCGCGGTGATCACTTGCCCTACGGCTGCGATTTTCCAAACCACGTCCCAACCGGTAGATTCTCAAACGGAAAAATATCAACCGATTACTTTAGCCAAATTCTAGGCATTAAGGATTTATTGCCTGCTTTTCTTGACCCGCAAGTTACCGATAATGATTTATTAACCGGGGTTAGTTTCGGCTCAGGTGGTTCGGGTTTGGATAGCCATACAGTGGCCTTAGCTAACGTCTTGGATTTGGGTTCACAATTTGAGTTATTTGAGCAAGCTTTGTTGAGGATCAGAAGATTTGTTGGTAATGAAAAGGCTAATGATATAATCCAAAATGCATTATTTGTGATTAGTATTGGGACTAATGATATGTTGTTCAATGTTTATATGTTGCCAACAAGTACTGTTACTCCTTATGGTTCTATTTCATCTTATCAAGATTTTTTGCTCCAAAATCTTCAGAATTTTATTCAGAGATTGTATGGAGCTGGAGGTCGTAGGATAATGGTGGCAGGTCTTCCTCCAATTGGTTGTCTTCCAATACAAGTGACAATAGATAGCATCATACCTAGCCAAAATTGGCTACAACGTGTTTGCAACGTACAACAGAACATTGATTCTCAAAATTACAATGCTAAACTTCAATATCATGTTCATTTACTGCAAGCCACACTCCAAGATGCTAAGGTTGCTTATTTAGATATCTATACACCCATTCTTGATATGGTCCTATACCCAGCCAAATACGGATTTGGGCATTCACTTCAAGGATGCTGTGGAACAGGGATGTTGGAGATGGGACCTGTGTGCAATACAGATGACATAATTTGCCCTGATCCATCTAAGTATTTATTTTGGGATGCTGTGCACCTTACACAAAAAGGGTACTCAGTTGTTGCCAATAATGGTCAAACTCTGCTTCCATATCTTACTAGTTAG 1086 0.3904 MASKTTSSFFFLSLLVFLSIPNSAIASDKITAIFAFGDSTIDAGNNNHLNSLFRGDHLPYGCDFPNHVPTGRFSNGKISTDYFSQILGIKDLLPAFLDPQVTDNDLLTGVSFGSGGSGLDSHTVALANVLDLGSQFELFEQALLRIRRFVGNEKANDIIQNALFVISIGTNDMLFNVYMLPTSTVTPYGSISSYQDFLLQNLQNFIQRLYGAGGRRIMVAGLPPIGCLPIQVTIDSIIPSQNWLQRVCNVQQNIDSQNYNAKLQYHVHLLQATLQDAKVAYLDIYTPILDMVLYPAKYGFGHSLQGCCGTGMLEMGPVCNTDDIICPDPSKYLFWDAVHLTQKGYSVVANNGQTLLPYLTS 361
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu05g03360 361 Gene3D SGNH hydrolase 21 357 IPR036514 -
Tsu05g03360 361 CDD SGNH_plant_lipase_like 31 351 IPR035669 -
Tsu05g03360 361 Pfam GDSL-like Lipase/Acylhydrolase 33 350 IPR001087 GO:0016788
Tsu05g03360 361 PANTHER OS05G0468500 PROTEIN 10 352 - -
Tsu05g03360 361 PANTHER GDSL ESTERASE/LIPASE EXL3 10 352 - -
Tsu05g03360 361 SUPERFAMILY SGNH hydrolase 33 351 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tsu05g03360 Tsu-Chr5 45004213 45006061 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tsu05g03360 10 350 Pollen Coat Proteome AT1G75930 35.260 4.64e-60 195
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu05g03360 - - aprc:113874497 508.449