Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu05g03344 ATGGCTTTTTCCAACAACGTAGAAGCAATTTTACAATTTCTAAGAAAAAATGGATTATCAGAAGCAGAATCTGCTCTCAGACAAGACATCATTGAAAAGAACAACACTGATtttaatgttgatgttgattttgatgttgatgttgatgttgCTTCTTTTGACTATGAGAAATTCTTCTTTCCTATGGTTCCTCCTCCTCCTAAAGTTAGAGTCCGATCATTTTCACGGCCGCCGGAGTTTGTCTCCGGCGACGGTCAATTCTTCAAATCGAACTCTGTTTCTTCTGATGAACAGTTTGTTAGCATCGGTTCTACTACTTCTCGTTCTCGTGTTTCTTCTTCAGAATTCATCAATCCATATGGAATCAATTCATCATCTCAGACTTTGAATGATTCTGAATCTTCATCTGATAGATTGTCACAATTCGGCACAGCACGTGATTATCACGATTTCGATATGCAACATGAACCATATTGGtataatgaaaatgatgatgatgatttcatGACTCCTGATTTTGAAGGACCGGATTTCTTTGCGTGTCAAAGTGAAGATAAGTTTGTTACGGAAAATCAACTTGAAAATTCTGTGGATCTTGTTTACAACTACGAAGAAATTCAATTAGAGGGAAATGAGGGTTACATGGATAAGCCGATGAAACCTTGCATTTGTAATCACTCATCTGTAAGTGAGGAAAATGTGAATTATTCGAAAGATTACTGTCATGAGGCTGAGAAAGATGGTGTTGCACATAATTGTGAAGTTGCGTTTTGCAAAAGCAGTCCGGTTTCAGTAGGTTCTTGTAGTGGAGATCCGATAAACTTTGGCTACCCTAATTTGAAGGAAATTGATCTGAATGATTTTCATCTGAAGGATATTATTAAGTCTTTCGATTCTGCTCCGTTGCTTACCGTGAAGCAAAGTTTCGATTGCTACACTAAAAATGATAGTGGTGAGAGGTACAAGGATCCCTATGACTTAACTATCGATGTTGCTGAAACAAATTTACCGAATGGGATTGATGCCTATGAAGTAAGAGATAGTCAAGAGTTGAGTGAAGAATTACATGTTCCGGAAGTTGCTACAGATGGAGAggataataatgataataatactGATGATGAGCTCTTAAAATACATTCAAGACGATGAATACGAAGTATTTGAGCTAAGAATTGTTCATAGAAAGAACAGGACTGGATTCGAAGAAAACAAAGAAGTGCCGATTGTGATAAATTCAGTCATGGCAGGCAGGTACTACATAACAGAATATCTCGGTTCGGCTGCCTTTAGTAGGGTTGTTCAAGCCCACGATCTACAGATGGGAATCGATGTTTGTTTGAAGATTATTAAAAATGACAAGGATTTCTTTGATCAAAGCCTAGACGAAATCAAGCTTCTGAAACTAGTCAATAAGCACGACCCCGGAGATAAACACCACATATTGCGTCTTTATGACTATTTCTACCATCAGGAGCATTTATTCATTGTGACGGAACTTCTGCGTGCGAATTTGTATGAATTTCAAAAGTTCAACCAAGAATCTGGAGGGGAAGCATATTTTACATTACATAGATTGCAGTGCATTACTCGACAATGTTTGGAGGCATTGCAATATTTGCATAACTTGGGAATTGTTCACTGTGACTTGAAACCAGAAAACATTCTAATCaaaagttacaaaaaatgtGAAGTAAAGATTATTGATCTTGGAAGCAGTTGCTTTAAAACAGACAATCTGTGCCTATATGTACAATCCCGATCCTATAGAGCTCCTGAAGTGATGTTAGGCCTTCAATATGATGAAAAGATTGATATATGGTCGCTCGGCTGTATTTTGGCTGAGCTATGCTCCGGTGAAGTGCTGTTTCCAAATGACTCAGTTGTGATGATTCTCGCACGCATGATTGGAATGTTTGGTCCTTTTGATATGGAGATGTTGGTGAAAGGTCAGGAAACACACAAGTACTTCACCAAAGAATATGATATTTACTTTGTGAATGAGGAGACAGATCAACTAGAGTACATAATTCCAGAAGAATCGTCATTGGAGCAGCACCTACAGATCACCGATACTATGTTTATCGACTTTGTCAGTTACTTGCTTACCATCAACCCCAAAAGAAGACCTACTGCAAGACAGGCACTAAAACATCCATGGCTTTCCTATGATTACAAGTCCATGTAA 2187 0.3676 MAFSNNVEAILQFLRKNGLSEAESALRQDIIEKNNTDFNVDVDFDVDVDVASFDYEKFFFPMVPPPPKVRVRSFSRPPEFVSGDGQFFKSNSVSSDEQFVSIGSTTSRSRVSSSEFINPYGINSSSQTLNDSESSSDRLSQFGTARDYHDFDMQHEPYWYNENDDDDFMTPDFEGPDFFACQSEDKFVTENQLENSVDLVYNYEEIQLEGNEGYMDKPMKPCICNHSSVSEENVNYSKDYCHEAEKDGVAHNCEVAFCKSSPVSVGSCSGDPINFGYPNLKEIDLNDFHLKDIIKSFDSAPLLTVKQSFDCYTKNDSGERYKDPYDLTIDVAETNLPNGIDAYEVRDSQELSEELHVPEVATDGEDNNDNNTDDELLKYIQDDEYEVFELRIVHRKNRTGFEENKEVPIVINSVMAGRYYITEYLGSAAFSRVVQAHDLQMGIDVCLKIIKNDKDFFDQSLDEIKLLKLVNKHDPGDKHHILRLYDYFYHQEHLFIVTELLRANLYEFQKFNQESGGEAYFTLHRLQCITRQCLEALQYLHNLGIVHCDLKPENILIKSYKKCEVKIIDLGSSCFKTDNLCLYVQSRSYRAPEVMLGLQYDEKIDIWSLGCILAELCSGEVLFPNDSVVMILARMIGMFGPFDMEMLVKGQETHKYFTKEYDIYFVNEETDQLEYIIPEESSLEQHLQITDTMFIDFVSYLLTINPKRRPTARQALKHPWLSYDYKSM 728
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu05g03344 728 PANTHER HYPOTHETICAL SER-THR PROTEIN KINASE-RELATED 8 725 - -
Tsu05g03344 728 PANTHER DUAL SPECIFICITY PROTEIN KINASE 8 725 - -
Tsu05g03344 728 SMART serkin_6 419 721 IPR000719 GO:0004672|GO:0005524|GO:0006468
Tsu05g03344 728 Gene3D Phosphorylase Kinase; domain 1 413 500 - -
Tsu05g03344 728 Gene3D Transferase(Phosphotransferase) domain 1 473 721 - -
Tsu05g03344 728 ProSitePatterns Serine/Threonine protein kinases active-site signature. 545 557 IPR008271 GO:0004672|GO:0006468
Tsu05g03344 728 Pfam Protein kinase domain 421 721 IPR000719 GO:0004672|GO:0005524|GO:0006468
Tsu05g03344 728 CDD PKc_DYRK_like 419 721 - -
Tsu05g03344 728 ProSiteProfiles Protein kinase domain profile. 419 721 IPR000719 GO:0004672|GO:0005524|GO:0006468
Tsu05g03344 728 SUPERFAMILY Protein kinase-like (PK-like) 408 723 IPR011009 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tsu05g03344 Tsu-Chr5 44755821 44760149 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tsu05g03344 416 716 MAP Kinase Gene Family AT5G19010 31.776 1.64e-32 131
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CMGC_DYRK-PRP4 Tsu05g03344 Pkinase 1.9e-51 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu05g03344 - - gmx:100783988 1056.59
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tsu05g03344 05 44755821 44760149 Tsu05g03344 05 44755821 44760149 ECH