Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu05g03341 ATGAAGACCAATTCACTCTCTTCCGTCGTCTTTTCCACTTTCACCGTCGTTATTCTCCTTTTTTCAACACCCTTTTGCAATGCTCTCGGCTCCGGCACCACCCTCGCTGTCGTCGACTCCACCGGAACAGTCTGCGGCGTTGTATCAGCAGAAAAAACTCAAAACATTGTTTGTTACCGTCACGGGAAAATAATCTCCGCCGAGCCGGAAGTCTCATTCTCATCAATCTCCGGCGGAAAAAACTACTTCTGTGGTATTAGGTCCGGTAACTATAGTATCCTATGTTGGGACACTGTTTCATCAAACACAACGTTTGAAAAAAGAAGACTTTACAACAATGGCACTGTTTTGTACGAGAATCTCGCCGTCGGAGATTCCCATGTTTGTGCCACGGTGGTCGGAGTTGGAACTGTTTCTTGTTGGAGAATTAATAAAGGTTTTATTTTGTCATCTGGGTATGATCAATTTTCATCAATAACTTCTGGGTTTGGATTCTCTTGTggaattttgaagaaaaatatttctgGGTCGGTTCGTTGTTTTGGGAATGTGGATGAATCTTCCATAGCTGAAAAGATAGAGAAAGAGTTTATGAATATTTCTATGGTGAGTCTTGTAGCTGGTGAGTCACATGTTTGTGGATTAAATTCAAAAGGGTTTTTAGTTTGTAAAGGAAGTAACAATTTTGGTCAAATTAATGTTCCTAATCAAGTTAAACCTTTGGAGTATTCTGATTTAGCATTAGGATCTGAACATAGTTGTGCTATTAGAAGATCTAATGGTTCTGTTGTTTGTTGGGGTGGTAAAGGTTTGTTTAATGTTAATGTTACAAAAAGTGTTTCTTTTGAGAGTATTGTTTCTGGTTCAAATTTCACTTGTGgattaacaactaacaatttttCTGTTATTTGTTGGGGTCCTGGTTGGTTTGATAATGGTGGTTCAGTTTTTGAGATTCCTTTGCCACCAATTCTACCAGGGATTTGTGTTCAATCTTCTTGTGGTGAATGTGGTATATATCCTCAATCTCAGTTTTTGTGTTCTGGTTTTGGTAACATTTGTAAGCCAAAACCTTGTTGGCCTCAATTGGAAGAAGTTCCGGCGCCGTCAATAATACAACCGTCGTCGAATTCGGGGGTGCCGGTTTCTAGATCAAAGACATTGACAAAGGGGTTGTTTGTGTTTGCTATTGTTGGATCAATTGGAGCTATTGCTGGTGTTTGTACTGTGGTTTATTGTTTGTGGAATGGTGTGTGTTTTGGTAAGAAGAAAGTTCATAATTCAGTTCAACCAACAATTACTAGAGGTGGAAGTTTCAATTGCGGTGGTTTTTCGAATCATAGTCCGCTTTCGAGATCATCCACGATTAAGCGTCAGAGTTCGAGGATAATGAAGCGTCAGAGAAGCGGAACATCTTCAACAAAGCATCCAGATAGATCAGAAGATTTCGCTCTTGCTGAGCTTGTTGCAGCCACCAACAATTTCTCACGTGAGAACAAGATTGGTGCTGGAAGCTATGGGATTGTTTACAAAGGTAAACTCACTGATGGTCGTGAGGTAGCAATCAAAAGAGGTGAAACTAGCACTAAGATGAAGGTTTTTCAAGAGAAAGAGAGCGCGTTCGAGTCCGAATTAGCCTTCTTGTCGCGTCTGCACCACAAGCACTTAGTTAGACTAGTCGGTTTCTGTGACGAGAAAGATGAAAGGCTTTTGGTGTATGAGTTCATGAAGAATGGTGCATTGTATGATCATTTGCACGACAAGAACAACATCGATAAGGATAGTAGTTTATTGAATTCTTGGAAAATGAGGATCAAAATTGCGTTGGATGCTTCACGAGGAATTGAGTATCTCCACAATTACGCAGTTCCATCGATAATTCATCGAGATATAAAGTCTTCAAACATTCTAATTGATGCGGATTGGACAGCAAGAGTCTCCGATTTTGGATTGTCAATGATGAGTCCAGATTCGGATCACGAGTACCAACCAACAAAAGCAGCAGGAACAGTCGGATACATTGATCCCGAATACTACGGTCTAAATGTATTAACAGCAAAGAGTGATGTCTATGGTCTCGGAGTAGTTTTACTAGAACTATTAACAGGAAAAAGAGCTATATTCAAGAATGACGAAAATGGCGGAACACCAGTTAGTATAGTAGATTTTGCAGTGCCTATAATTATGAAAGgagaattgatgaaaatattgGATCAAAGGGTCGAAAAACCAGAAATGAATGAAACAGAAGCAGTTGAATTAGTGGCATATACTGCTATGCATTGTGTGCATTTAGAAGGAAAAGATAGACCAACAATTTCTGATATTGTGGCAAATTTAGAACGTGCTTTTACTCTTTGTGATAGTAGTAGTCATGGTAGCATTTCTAGTGCTACAATCTCTATTGGATCTGACTGA 2418 0.3888 MKTNSLSSVVFSTFTVVILLFSTPFCNALGSGTTLAVVDSTGTVCGVVSAEKTQNIVCYRHGKIISAEPEVSFSSISGGKNYFCGIRSGNYSILCWDTVSSNTTFEKRRLYNNGTVLYENLAVGDSHVCATVVGVGTVSCWRINKGFILSSGYDQFSSITSGFGFSCGILKKNISGSVRCFGNVDESSIAEKIEKEFMNISMVSLVAGESHVCGLNSKGFLVCKGSNNFGQINVPNQVKPLEYSDLALGSEHSCAIRRSNGSVVCWGGKGLFNVNVTKSVSFESIVSGSNFTCGLTTNNFSVICWGPGWFDNGGSVFEIPLPPILPGICVQSSCGECGIYPQSQFLCSGFGNICKPKPCWPQLEEVPAPSIIQPSSNSGVPVSRSKTLTKGLFVFAIVGSIGAIAGVCTVVYCLWNGVCFGKKKVHNSVQPTITRGGSFNCGGFSNHSPLSRSSTIKRQSSRIMKRQRSGTSSTKHPDRSEDFALAELVAATNNFSRENKIGAGSYGIVYKGKLTDGREVAIKRGETSTKMKVFQEKESAFESELAFLSRLHHKHLVRLVGFCDEKDERLLVYEFMKNGALYDHLHDKNNIDKDSSLLNSWKMRIKIALDASRGIEYLHNYAVPSIIHRDIKSSNILIDADWTARVSDFGLSMMSPDSDHEYQPTKAAGTVGYIDPEYYGLNVLTAKSDVYGLGVVLLELLTGKRAIFKNDENGGTPVSIVDFAVPIIMKGELMKILDQRVEKPEMNETEAVELVAYTAMHCVHLEGKDRPTISDIVANLERAFTLCDSSSHGSISSATISIGSD 805
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu05g03341 805 Gene3D - 199 317 IPR009091 -
Tsu05g03341 805 SMART serkin_6 495 784 IPR000719 GO:0004672|GO:0005524|GO:0006468
Tsu05g03341 805 Gene3D - 26 198 IPR009091 -
Tsu05g03341 805 Pfam Protein kinase domain 496 778 IPR000719 GO:0004672|GO:0005524|GO:0006468
Tsu05g03341 805 ProSitePatterns Serine/Threonine protein kinases active-site signature. 626 638 IPR008271 GO:0004672|GO:0006468
Tsu05g03341 805 SUPERFAMILY RCC1/BLIP-II 64 306 IPR009091 -
Tsu05g03341 805 MobiDBLite consensus disorder prediction 448 478 - -
Tsu05g03341 805 PANTHER SERINE/THREONINE-KINASE CCR4-LIKE PROTEIN 6 802 - -
Tsu05g03341 805 PANTHER SERINE/THREONINE-PROTEIN KINASE-LIKE PROTEIN CCR4 6 802 IPR044815 GO:0004674
Tsu05g03341 805 SUPERFAMILY Protein kinase-like (PK-like) 474 780 IPR011009 -
Tsu05g03341 805 ProSiteProfiles Protein kinase domain profile. 495 785 IPR000719 GO:0004672|GO:0005524|GO:0006468
Tsu05g03341 805 Gene3D Phosphorylase Kinase; domain 1 454 575 - -
Tsu05g03341 805 ProSitePatterns Protein kinases ATP-binding region signature. 501 523 IPR017441 GO:0005524
Tsu05g03341 805 Gene3D Transferase(Phosphotransferase) domain 1 576 794 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tsu05g03341 Tsu-Chr5 44708666 44711083 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tsu05g03341 1 805 Receptor kinase-like Gene Family AT3G55950 57.194 0.0 831
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_CR4L Tsu05g03341 Pkinase 3.8e-46 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu05g03341 - - gmx:100782916 1184.86
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tsu05g03341 05 44708666 44711083 Tsu05g03341 05 44708666 44711083 ECH